BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932541 Length=1273 Score E Sequences producing significant alignments: (Bits) Value AT2G24696.1 | Symbols: | transcriptional factor B3 family prot... 863 0.0 > AT2G24696.1 | Symbols: | transcriptional factor B3 family protein | chr2:10509068-10510902 REVERSE LENGTH=1128 Length=1128 Score = 863 bits (467), Expect = 0.0 Identities = 668/764 (87%), Gaps = 18/764 (2%) Strand=Plus/Plus Query 479 AAAGCTACCAACCCAGAAGAGATTTGTGACTGTAAGAGTCGTACCTGATTGTC-T-CAAA 536 |||| |||||| |||| ||||||| |||||||||||| |||||||||| |||| | ||| Sbjct 369 AAAGTTACCAAACCAGGAGAGATTCGTGACTGTAAGACTCGTACCTGACTGTCTTAGAAA 428 Query 537 CGTTGTAGACTGTATCTCTCAAGGCGGTTCTTGAAAAATAATGGTTTGGGGGAAACAAAG 596 | ||| |||||||||||||||| ||| ||||||||||||| ||||| ||| ||||| Sbjct 429 C--AAAAGATTGTATCTCTCAAGGCGATTCCTGAAAAATAATGGCTTGGGCGAACCAAAG 486 Query 597 ATGGTAACACTACTGGGAACAGATGGTACAAGGAGGTTGGCAAATCTTGTACGGGAAACC 656 |||||||||||| |||||||||||||||| |||| ||||| |||||| ||||||||| | Sbjct 487 ATGGTAACACTAGTGGGAACAGATGGTACGAGGATATTGGCTAATCTTTTACGGGAAAGC 546 Query 657 AGTGGACGAATGAGCTTGGGTAGGGGTTGGGTTGAGTTTGCGAAAGAAAAT-GGTTTGAA 715 | ||| ||||||||||||| ||||| ||||| || |||||||||| ||| || ||||| Sbjct 547 ACAGGAAGAATGAGCTTGGGAAGGGGATGGGTAGATTTTGCGAAAGCCAATAGG-TTGAA 605 Query 716 GATAGGTCAGTACTTTACACTGGAGTCCATTTGGGCAAATGA-TAGTCCTATCCTCAAAT 774 ||||||| ||||||||||||||||||||||||||| |||||| | |||||| |||| | Sbjct 606 GATAGGTGAGTACTTTACACTGGAGTCCATTTGGGAAAATGACT-CTCCTATTCTCAGTT 664 Query 775 TGTCTAGTACAAATGA-TTCCAAAAGTGATAAAAGGAAGCATAGAGAGAACTTTCCAGTA 833 ||| | | |||||| | ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 665 TGTATGGGACAAAT-ACTTCCAAAAGTGATAAAAGGAAGCGTAGAGAGAACTTTCCAGTA 723 Query 834 GCTAGCCACAAAGAGTTTGTTTCCACTGAGGCTAGCGATGGAAACGAACCCGAGAAAGAC 893 ||| | | ||||||| ||| |||||||||||||| || |||| ||||||||||||||| Sbjct 724 GCTTGTGAGAAAGAGTATGTGTCCACTGAGGCTAGAAATAGAAATGAACCCGAGAAAGAC 783 Query 894 ATGAACACAGAGGAGATGATTAATCAATCATCACTAATCGATAACCGATTAGTGATATTA 953 | ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| | Sbjct 784 AAGAACACAGAGGAGATGATTAATCAAGCATCACTAAGCGAAAACCGATTAGTGATA--A 841 Query 954 GCACTCGAACCTGAGGATGCCAAAGCCGGAATGCTGTATCTTCCAAGTCACTTCATGAAA 1013 |||||| ||| || |||| ||||||||| |||||| |||||||||||||||||||||| Sbjct 842 -CACTCGTACCAGAAGATGTCAAAGCCGGTATGCTGCGTCTTCCAAGTCACTTCATGAAA 900 Query 1014 GCTAATGGCATCGACAAAATTGGAAAAATATATATGTTGGGTACAAATGAAATGGAGTGG 1073 ||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 901 GCTAATGGCATAGACAAAGTTGGAAAAATATATATGTTGGGTATAAATGAAATGGAGTGG 960 Query 1074 TGGTGGGGAAATCTATTGACAAGAGATGGAATCGTATCTGTAGGATGTCGTTGGAGATAC 1133 ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 961 TGGTGGGGAGATCTATTGACAAGAGATGGAATCGTATCTGTAGGATGTGGTTGGAGATA- 1019 Query 1134 TTT-TGTAAATCTAATGGCGTAAAGATTGGACAA-TATTTCAAATTAGAATATATGTATA 1191 ||| ||| ||||||||||||||||||||||| || | ||||| ||||||| |||||| | Sbjct 1020 TTTCTGTGAATCTAATGGCGTAAAGATTGGA-AAGTCTTTCACCTTAGAATGTATGTACA 1078 Query 1192 AGTATGACACAAGGCCGGTACTCAAATT-TGTCCCAAGTCCGGG 1234 | |||||||||||||| ||| | ||||| ||||||||||||||| Sbjct 1079 AATATGACACAAGGCCCGTATTTAAATTCTGTCCCAAGTCCGGG 1122 Score = 459 bits (248), Expect = 4e-128 Identities = 334/374 (89%), Gaps = 12/374 (3%) Strand=Plus/Plus Query 22 TGTTTAACGTCAGCGCTTGTGACATCCGTGACAAACCCA-GCCCCAGCAACATTGAAATC 80 |||| ||||||||||| |||||||||||||||||||||| | |||||||||| ||| ||| Sbjct 5 TGTTCAACGTCAGCGCCTGTGACATCCGTGACAAACCCATG-CCCAGCAACAATGATATC 63 Query 81 AAGAAGCTCGTA-CTGCTTGAAAGAGaaaaaaaaGTGAGGAAGATCAATTCACAATCCGA 139 || ||| ||| | | ||||||||||| ||||||||||||||||| || |||||||||||| Sbjct 64 AACAAGATCG-ATCAGCTTGAAAGAGTAAAAAAAGTGAGGAAGAACAGTTCACAATCCGA 122 Query 140 AGCTAG-TACTTCTTCATC-GGATAACTCTTCTTTTGTAGCCCTTGTCAAGGCTTCAAAT 197 |||| | | |||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 123 AGCTGGCT-CTTCTTCATCTGG-CAACTCTTCTTTTGTAGCCCTTGTCAAGGCTTCAAAT 180 Query 198 CTAGAGGAAGATACTCTGTATCTTCCACAAGATTGCACAAGATCTAATGGTCTGAATCGA 257 ||| |||||||| | |||||||||||||||||||||||||| ||||||||||| ||| | Sbjct 181 CTAAAGGAAGATGCACTGTATCTTCCACAAGATTGCACAAGTTCTAATGGTCTAAATAAA 240 Query 258 AAATGCCGCAAGATTGTTT-TAACAGATGGAGGG-AGTAGATCATGGGAAATGGAACTGA 315 ||||||||||||||| ||| |||||||||||||| | |||||||||||||||||| |||| Sbjct 241 AAATGCCGCAAGATT-TTTCTAACAGATGGAGGGGA-TAGATCATGGGAAATGGATCTGA 298 Query 316 AATTCAAGAAAAACTTGGGTAGTTTTTACATAACGAGAGGTTGGAGACATTTCTGTGACG 375 | ||| | |||||||| | |||||||| |||||| ||||||||||||||||||||||||| Sbjct 299 AGTTCGACAAAAACTTAGATAGTTTTTGCATAACCAGAGGTTGGAGACATTTCTGTGACG 358 Query 376 AAAACGGCAAAAAG 389 ||||||| |||||| Sbjct 359 AAAACGGGAAAAAG 372 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62600079615 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5