BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg932575
Length=1936
Score E
Sequences producing significant alignments: (Bits) Value
AT4G00260.1 | Symbols: MEE45 | Transcriptional factor B3 family... 1035 0.0
AT2G24645.1 | Symbols: | Transcriptional factor B3 family prot... 691 0.0
AT2G24748.1 | Symbols: | pseudogene of transcriptional factor ... 490 2e-137
AT2G12170.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 322 8e-87
AT2G12160.1 | Symbols: | pseudogene, hypothetical protein | ch... 255 9e-67
> AT4G00260.1 | Symbols: MEE45 | Transcriptional factor B3 family
protein | chr4:114971-117051 FORWARD LENGTH=1587
Length=1587
Score = 1035 bits (560), Expect = 0.0
Identities = 967/1154 (84%), Gaps = 65/1154 (6%)
Strand=Plus/Plus
Query 393 CAACATTTCTTCAAGCCTCTTCTTCCCGGATTCCACAG--TCACTTGACAATTCCTGTGG 450
|||||||||||||||||||||||||| || |||||| | || ||||||||||||||| |
Sbjct 10 CAACATTTCTTCAAGCCTCTTCTTCCTGGCTTCCAC-GCCTC-CTTGACAATTCCTGTAG 67
Query 451 CTTTCTTCTTGAAGAATATAGAAGGAAGACATGAGCAGAAGACGGCGGAGCTGAGATCAG 510
| |||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 68 CCTTCTTCTTGAAGTATATAGAAGGAAGATATGAGCAGAAGACGGCGAAGCTGAGATCAG 127
Query 511 ACGCGTCAAAGATAACTTGGGAAGTGAAGATTGATGGACAGAGACTCACTGACGGTTGGA 570
|||||||||||| |||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct 128 ACGCGTCAAAGAGAACTTGGGAAGTGAAGATAGATGGCCAGAGACTCACCGACGGTTGGA 187
Query 571 AAGAGTTTGCTCTCTCGCATGATCTTCGAATCGGTGACATTGTGGTGTTT-AGACAAGAG 629
||||||||||| |||| |||||||||||||||||||||||||| || ||| |||||||||
Sbjct 188 AAGAGTTTGCTGTCTCACATGATCTTCGAATCGGTGACATTGTTGT-TTTCAGACAAGAG 246
Query 630 AGAGA-TATGTG-TTTCCACGTTACAATGTTGGGACCTAGTTGTTGTGAGATTCAATATG 687
|| || | || | |||||| || ||| ||||||||||||||||||||| |||||||||||
Sbjct 247 AGTGACT-TG-GCTTTCCATGTAACACTGTTGGGACCTAGTTGTTGTGGGATTCAATATG 304
Query 688 GTTCGTGTTTAGAC-AACAAGAACAACCTCGG-GA--AG--ATTCAAAG-GAAGAAGAAT 740
||||||||| || | || |||||||||||||| || || | |||| |||| |||||
Sbjct 305 GTTCGTGTTCAGTCGAA-AAGAACAACCTCGGTGACGAGAAAAAGAAAGTGAAGGAGAAT 363
Query 741 CCAAGA-AGAGAAACAGAGTCTTCGTCACTAGATCCTTCTTGTTTTGTGGCTAATGTCAC 799
|||| | ||||| |||||||||| |||| |||||| |||||||||||||||||||| |
Sbjct 364 CCAA-ATGGAGAAGCAGAGTCTTCTTCACGAGATCCCTCTTGTTTTGTGGCTAATGTTGC 422
Query 800 GGTTTCGAGTCTACGCGATGAC-AGACTGA-ATCTTCCAAGAAGTTTTGTGAGGGAAAAT 857
| |||||||||||| ||||| || ||| || ||||||| ||||||||||||| |||
Sbjct 423 GCCTTCGAGTCTACGTTATGACTTGA-TGAGAT-TTCCAAGGGGTTTTGTGAGGGATAAT 480
Query 858 GGTCTAGACAAAAGATGTGTAGAGATTGTTCTGATGAATGAAAAGGGCAGAACATGG-AC 916
||| ||| | ||| || ||||||||||||||||||||||||||||||| ||||| |
Sbjct 481 GGTGTAGTC---GGATCTGGAGAGATTGTTCTGATGAATGAAAAGGGCAGATCATGGAAT 537
Query 917 TTTAGATTTGAAAGGAAA-CAAATCATACGGAACTA-CTTACATCAAACGAGGAT-GGAG 973
|||| | |||| | ||| | |||| ||||||| | ||| | | | |||| | || |
Sbjct 538 TTTA-ACTTGAGACAAAAGC-CATCAAACGGAAC-AGTTTATGTTAGAGGAGGGTGGGTG 594
Query 974 AAGTTTCTGCCATGCCAATGGACTTAGAGCTGGAAG-TATCTTCACTTTCAAACTGATCa 1032
||||| || |||||||||| |||| |||||| || || || |||||||||||||||||
Sbjct 595 -AGTTTTTGTGATGCCAATGGGCTTAAAGCTGG-AGATAACTACACTTTCAAACTGATCA 652
Query 1033 aaaaaggaaaaaCTCCGGTTCTACGTTTGTT-CTCCAAAGAGCCAGAAGAACAAGCTAAT 1091
||| || | ||||| |||||||||||||| | |||| |||||| |||| ||||||||
Sbjct 653 AAAGAGCAGGAACTCTTGTTCTACGTTTGTTAC-CCAATGAGCCAAAAGAGGAAGCTAAT 711
Query 1092 GAAGCGTCTCTTTCTCC--AGAACTGGAAAGCAATGAAGATAGCAACCTTGGGAAGATTC 1149
|||| ||||| ||| || ||||| ||||||| ||| ||| ||||||||| |||||||
Sbjct 712 GAAGTGTCTC-TTC-CCGAAGAACCGGAAAGCGATGCAGAGCGCAACCTTGAAAAGATTC 769
Query 1150 AAAGG-A-G-G-AA--GAA-TCCAA-GT----AGAGAAACAGAGTCTTCTTCACTAGATC 1197
||||| | | | || ||| || || ||||| ||||||||||||||| |||||
Sbjct 770 AAAGGAAGGAGAAAGTGAAGAAGAATGTAACAAGAGAGGCAGAGTCTTCTTCACAAGATC 829
Query 1198 CCTCTTGTTTTGTGGCTAATAT-TACGCGTTCGAGTCTACGTTATGACATACTGTATCTT 1256
|||||||||||||||||||| | | | | |||||||||||| ||||||| ||||||||||
Sbjct 830 CCTCTTGTTTTGTGGCTAATGTCT-CCCCTTCGAGTCTACGCTATGACACACTGTATCTT 888
Query 1257 CCAAAGCGTTTTATGAGGGCAAATGGTCTAGACACAAGATGTGGAGAGATGATTTTGATG 1316
||||||||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||
Sbjct 889 CCAAAGCGTTTTATGAGGGAAAATGGTGTAGACAAAAGATGTGGAGAGATGATTCTGATT 948
Query 1317 AACGAAAAGGGCAGATCATGGGCTTTAGATTTGAAACG-AAAGAACTCATGCGGAACTAC 1375
|| |||||||| | ||||||| |||||||||||||| | |||||| |||| ||||||| |
Sbjct 949 AATGAAAAGGGAAAATCATGGACTTTAGATTTGAAA-GTAAAGAAATCATCCGGAACTTC 1007
Query 1376 T-TACATCAAACGAGGATGGAGAAGTTTCTGTCGTGTCAATGGACTTAGAGCTGGAAGTT 1434
| | |||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||
Sbjct 1008 TCT-CATCAAACGAGGATGGAGAAGTTTCTGTAGTGCCAATGGACTAAGAGCTGGAAGTA 1066
Query 1435 TCTATA-CTTTCAAACTGATCCA-AAATGAAAGAACTCTGGTTCTACGTTTGGTCCCCAA 1492
|| ||| || |||||||||| | ||| || |||||| |||||||||||| |||||||
Sbjct 1067 TC-ATAACTCTCAAACTGATAAAGAAAAGAGC-AACTCTTGTTCTACGTTTGATCCCCAA 1124
Query 1493 AGAGCCAGAAGAAG 1506
|||||||||||||
Sbjct 1125 CGAGCCAGAAGAAG 1138
> AT2G24645.1 | Symbols: | Transcriptional factor B3 family protein
| chr2:10480532-10482795 REVERSE LENGTH=1814
Length=1814
Score = 691 bits (374), Expect = 0.0
Identities = 608/716 (85%), Gaps = 36/716 (5%)
Strand=Plus/Plus
Query 375 ATTTTGAGAATGGCAAAGCAACATTTCTTCAAGCCTCTTCTTCCCGGATTCCACAGTCAC 434
||||||| |||||| || |||||||||||||||||||||||||| || ||||||| |||
Sbjct 137 ATTTTGAAAATGGCGAATCAACATTTCTTCAAGCCTCTTCTTCCTGGCTTCCACACCCAC 196
Query 435 TTGACAATTCCTGTGGCTTTCTTCTTGAAGAATATAGAAGGAAGACATGAGCAGAAGACG 494
|||| ||| ||||| || ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 197 TTGAGAATACCTGTAGCCTTCTTCTTGAAGAATATAGAAGGAAGATATGAGCAGAAGACG 256
Query 495 GCGGAGCTGAGATCAGACGCGTCAAAGATAACTTGGGAAGTGAAGATTGATGGACAGAGA 554
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 257 GCGGAGCTGAGATCAGATGCGTCAAAGATAACTTGGGAAGTGAAGATAGATGGACAGAGA 316
Query 555 CTCACTGACGGTTGGAAAGAGTTTGCTCTCTCGCATGATCTTCGAATCGGTGACATTGTG 614
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 317 CTCACTGACGGTTGGAAAGAGTTTGCTCTCTCACATGATCTTCGAATCGGTGACATTGTT 376
Query 615 GTGTTT-AGACAAGAGAGAGATATGTGTTTCCACGTTACAATGTTGGGACCTAGTTGTTG 673
|| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 377 GT-TTTCAGACAAGAGAGAGATATGTCTTTCCACGTTACAATGTTGGGACCTAGTTGTTG 435
Query 674 TGAGATTCAATATGGTTCGTGTTTAGACAACAAGA-ACAACCTCGGGAAGATTCAAAGGA 732
|||||| |||||||||||||||| |||| | ||| | ||||||| | || | | |
Sbjct 436 TGAGATCCAATATGGTTCGTGTTCAGACGAGGAGAGA-AACCTCG--A-GA---A--G-A 485
Query 733 AGAAGAATCCAAGAAG-AGAAACAGAGTCTTCGTCACTAGATCCTTCTTGTTTTGT-GGC 790
|||||||||||| | | |||| || ||||||| ||||||||||||||||||||| | |||
Sbjct 486 AGAAGAATCCAA-ATGGAGAAGCAAAGTCTTCTTCACTAGATCCTTCTTGTTTT-TCGGC 543
Query 791 TAATGTCACGGTTTCGAGTCTACGCGATGACAGACTGAATCTTCCAA-GAAGTTTTGTGA 849
|||||| || |||||||||||| ||||| | || | |||||| | |||||||||
Sbjct 544 TAATGTGGCGCCTTCGAGTCTACGTTATGACTTAATGCTTTTTCCAATGG-GTTTTGTGA 602
Query 850 GGGAAAATGGTCTAGACAAAAGATGTGTAGAGATTGTTCTGATGAATGAAAAGGGCAGAA 909
||||||||||| ||| | ||| || | |||||||||||||||||||||||||||||
Sbjct 603 GGGAAAATGGTGTAGTCG---GATCTGGAAAGATTGTTCTGATGAATGAAAAGGGCAGAT 659
Query 910 CATGGACTTT-AGATTTGAAAGGAAA-CAAATCATACGGAACTACTT-ACATCAAACGAG 966
|||||| ||| | | |||| | ||| | | |||| |||||| | || | | | | |||
Sbjct 660 CATGGAATTTTA-ACTTGAGACAAAAGCCA-TCATGCGGAAC-AGTTTATGTTAGAGGAG 716
Query 967 GATGGA-GAAGTTTCTGCCATGCCAATGGACTT-AGAGCTGGA-AGTATCTTCACTTTCA 1023
| ||| || |||| || |||||||||||||| | ||||||| | ||||| ||||||||
Sbjct 717 GGTGGGTGA-GTTTTTGTGATGCCAATGGACTTCA-AGCTGGAGA-TATCTACACTTTCA 773
Query 1024 AACTGATCaaaaaaggaaaaaCTCCGGTTCTACGTTTGTT-CTCCAAAGAGCCAGA 1078
|||||||||||| |||| ||||| |||||||||||||| | |||||| | ||||
Sbjct 774 AACTGATCAAAAGAGGAGGAACTCTTGTTCTACGTTTGTTAC-CCAAAGGGGCAGA 828
Score = 401 bits (217), Expect = 1e-110
Identities = 360/427 (84%), Gaps = 18/427 (4%)
Strand=Plus/Plus
Query 1177 CAGAGTCTTCTTCACTAGATCCCTCTTGTTTTGTGGCTAATATTACGCGTTCGAGTCTAC 1236
||||||||| ||||||||||||||||||||||||||||||| || ||| ||||| |||||
Sbjct 825 CAGAGTCTTGTTCACTAGATCCCTCTTGTTTTGTGGCTAATGTTGCGCCTTCGACTCTAC 884
Query 1237 GTTATGACATACTGTATCTTCCAAAGCGTTTTATGAGGGCAAATGGTCTAGACACAAGAT 1296
| ||||||| ||||||||||||||||||||||||||||| ||||||| |||||| ||||
Sbjct 885 GCTATGACACACTGTATCTTCCAAAGCGTTTTATGAGGGAAAATGGTGTAGACAAAAGAC 944
Query 1297 GTGGAGAGATGATTTTGATGAACGAAAAGGGCAGATCATGGGCTTTAGATTTGAAACGAA 1356
|||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||| ||
Sbjct 945 GTGGAGAGATGATTCTGATGAATGAAAAGGGCAAATCATGGACTTTAGATTTGAAACTAA 1004
Query 1357 AGAACTCATGCGGAACTACT-TACATCAAACGAGGATGGAGAAGTTTCTGTCGTGTCAAT 1415
|||| |||||||||||| | | ||||| |||||||||||||||||||||| ||| ||||
Sbjct 1005 AGAAATCATGCGGAACTTCCCT-CATCAGACGAGGATGGAGAAGTTTCTGTAGTGCCAAT 1063
Query 1416 GGACTTAGAGCTGGAAGTTTCTAT-ACTTTCAAACTGATCCA-AAATGAAAGAACTCTGG 1473
||||| |||||||||||| || || |||||||||||||| | ||| | ||||||| |
Sbjct 1064 GGACTAAGAGCTGGAAGTATC-ATTACTTTCAAACTGATTAAGAAAAGTG-GAACTCTTG 1121
Query 1474 TTCTACGTTTGGTCCCCAAAGAGCCAGAAGAAGAAGAA-GAA-A-AAGCCAATG---TAG 1527
||||| ||||| || |||| |||||||||||||||| | | |||| |||| |||
Sbjct 1122 TTCTATGTTTGCTCTCCAACGAGCCAGAAGAAGAAGTGTGCTCAGAAGCTAATGAAGTAG 1181
Query 1528 AGTCTCTTTCCACAGAACC-GAGTG--ATGAAGAGAGCAGCCA-AGATGAGAAGAGCTCA 1583
|||||||||| ||||| | || | |||||||||| ||||| | | ||||| | ||||
Sbjct 1182 AGTCTCTTTCGACAGATCAAGAAAGCCATGAAGAGAGTAGCCACA-ACGAGAAAATCTCA 1240
Query 1584 C-AAGAA 1589
|||||
Sbjct 1241 AGAAGAA 1247
> AT2G24748.1 | Symbols: | pseudogene of transcriptional factor
B3 family protein | chr2:10536845-10537829 FORWARD LENGTH=772
Length=772
Score = 490 bits (265), Expect = 2e-137
Identities = 538/662 (81%), Gaps = 49/662 (7%)
Strand=Plus/Plus
Query 438 ACAATTCCTGTGGCTTTCTTC-TTGAAGAATATAGAAGGAAGACATGAGCAGAAGACGGC 496
||||||||| | || |||||| ||| |||||||| |||||||| ||||||||||||||||
Sbjct 1 ACAATTCCTTTAGCCTTCTTCTTTG-AGAATATATAAGGAAGAAATGAGCAGAAGACGGC 59
Query 497 GGAGCTGAGATCAGACGCGTCAAAGATAACTTGGGAAGTGAAGATTGATGGACAGAGACT 556
||| | || ||||| || || |||| ||| ||| ||||||| || ||||| ||||||||
Sbjct 60 AGAGTTAAGGTCAGATGCATCCAAGAAAACCTGGAAAGTGAAAATAGATGGCCAGAGACT 119
Query 557 CACTGACGGTTGGAAAGAGTTTGCTCTCTCGCATGATCTTCGAATCGGTGACATTGTGGT 616
|| ||||||||||||||||||||||| | |||||| ||||| | || ||||| | ||
Sbjct 120 TACCAACGGTTGGAAAGAGTTTGCTCTCGCACATGATGTTCGACTAGGCGACATCATTGT 179
Query 617 GTTT-AGACAAGAGAGAGATATGTGTTTCCACGTTACAATGTTGGGACCTAGTTGTTGTG 675
||| ||||||||||| | ||| |||||||||||||||||| |||||||||||||||
Sbjct 180 -TTTCAGACAAGAGAGTGGCATGACTTTCCACGTTACAATGTTAGGACCTAGTTGTTGT- 237
Query 676 AGATTCAATATGGT-TCGTGTTTAGACAACAAGAACAACCTCGGGAAGATTCAAAGGAAG 734
|||||||||| || |||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 238 -GATTCAATAT-GTGTCGTCTTTAGACAACCAGAACAACCTCGGGAAGATTCAAAGGAAA 295
Query 735 AAGAATCCAAGAAGAGAAACAGAGTCTTCGTCACTAGATC-CTTCTTGTTTTGTGGCTAA 793
||||| | |||| |||||||||| |||||||| || ||||||||||||||||
Sbjct 296 AAGAA---A-GAAG-----CAGAGTCTTC---ACTAGATCTCT-CTTGTTTTGTGGCTAA 342
Query 794 TGTCACGGTTTCGAGTCTACGCGATGACAGACTGAATCTTCCAA-GAAGTTTTGTGAGGG 852
||||||| ||||| ||||| | | | |||||| || |||||||||||
Sbjct 343 TGTCACGCCTTCGAATCTAC---A--A-----T----CTTCCATTGA-GTTTTGTGAGGC 387
Query 853 AAAATGGTCTAGACAAAAGATGTGTAGAGATTG-TTCTGATGAATGAAAAGGGCAGAACA 911
||| ||||||||||||||| |||| |||||| | ||||||| || ||||| |||||| ||
Sbjct 388 AAA-TGGTCTAGACAAAAGGTGTGGAGAGAT-GATTCTGATCAACGAAAAAGGCAGATCA 445
Query 912 TGGACTTTAGATTTGAAAGGAAACAAATCATA-CGGAACTACTTACATCAAACGAGGATG 970
|||||| |||| |||||| |||| || |||| | ||||||||||||||||||||||||
Sbjct 446 TGGACTGTAGACTTGAAACGAAAGAACTCATGTCC-AACTACTTACATCAAACGAGGATG 504
Query 971 GAGAAGTTTCTGCCATGCCAATGGACTTAGAGCTGGAAGTATCTTCACTTTCAAACTGAT 1030
| |||||||||| ||||||||||| |||||||||||||| |||| | |||||||||| |
Sbjct 505 GGGAAGTTTCTGTAATGCCAATGGATTTAGAGCTGGAAGTTTCTTTAGTTTCAAACTGTT 564
Query 1031 CaaaaaaggaaaaaCTCC-GGTTCTACGTTTGTTCTCCA-A-AGAGCCAGAAGAACAAGC 1087
| ||| ||| |||||| |||| |||||| | | ||| | |||| ||||||| ||||
Sbjct 565 CCAAAGAGGTGGAACTCCAGGTT-TACGTTCAT-C-CCACAGAGAGGTAGAAGAAGAAGC 621
Query 1088 TA 1089
||
Sbjct 622 TA 623
> AT2G12170.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1);
Has 18 Blast hits to 18 proteins in 1 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:4890080-4891424
REVERSE LENGTH=707
Length=707
Score = 322 bits (174), Expect = 8e-87
Identities = 216/236 (92%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 360 CTGAAAGATTTA-GGCATTTTGAGAATGGCAAAGCAACATTTCTTCAAGCCTCTTCTTCC 418
|||||||||||| || ||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 393 CTGAAAGATTTATGG-ATTTTGATAATGGCGAAGCAACATTTCTTCAAGCCTCTTCTTCC 451
Query 419 CGGATTCCACAGTCACTTGACAATTCCTGTGGCTTTCTTCTTGAAGAATATAGAAGGAAG 478
|||||||||| |||| |||||||||| || || ||||||||||||||||||||||||||
Sbjct 452 CGGATTCCACTGTCATTTGACAATTCATGCAGCCTTCTTCTTGAAGAATATAGAAGGAAG 511
Query 479 ACATGAGCAGAAGACGGCGGAGCTGAGATCAG-ACGCGTCAAAGATAACTTGGGAAGTGA 537
| | ||| ||||||||||||||||||||| || ||| ||| |||||||||||||||||||
Sbjct 512 AGACGAGTAGAAGACGGCGGAGCTGAGAT-AGGACGTGTCGAAGATAACTTGGGAAGTGA 570
Query 538 AGATTGATGGACAGAGACTCACTGACGGTTGGAAAGAGTTTGCTCTCTCGCATGAT 593
|||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 571 AGATAGATGGACAGAGACTCACTGACGGTTGTAAAGAGTTTGCTCTCTCACATGAT 626
> AT2G12160.1 | Symbols: | pseudogene, hypothetical protein |
chr2:4888068-4888932 REVERSE LENGTH=865
Length=865
Score = 255 bits (138), Expect = 9e-67
Identities = 219/256 (86%), Gaps = 14/256 (5%)
Strand=Plus/Plus
Query 1675 AGGTGAATGGCATACAAAATGCAAAGAAGATGAGTTTCTTGGATAAACATGGCGTGAAAT 1734
|||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 617 AGGTGAATGGCATAAAAAATGCAAAGAAGATGAGTTTCTTGGATAAAGATGATGTGAAAT 676
Query 1735 GGTCTACGAGTCTGAGGTTTGAACAGGACCGTCAGAGAATGAGACTGGTAGGAGGCTGGA 1794
||||||||| ||||||||||||| |||||||| ||||||||||| | |||||||| ||||
Sbjct 677 GGTCTACGAATCTGAGGTTTGAAAAGGACCGTAAGAGAATGAGATTAGTAGGAGGTTGGA 736
Query 1795 AAGA-GTTTTGCGATGCGAAC-GATGTGAAGATAGGAGAATCGATCA-TGTTAGAGCTAA 1851
|| | ||||||| |||| ||| | |||||||| |||||||||||| | |||| || || |
Sbjct 737 AA-ACGTTTTGCAATGCTAACTG-TGTGAAGAGAGGAGAATCGAT-AGTGTTGGAACTGA 793
Query 1852 TT-TGGGAATCAGACAAAAGCTCTGTTCTTAAGTTCTGCTCCAAGGTGAT---GCAAGAG 1907
|| ||| || |||| || ||| |||||||||||||| ||| || || || |||||||
Sbjct 794 TTGTGG-AAGCAGA-AA--GCTTTGTTCTTAAGTTCTACTCTAATGTAATAATGCAAGAG 849
Query 1908 ATCAAATGAAACTGTT 1923
||||||| ||||||||
Sbjct 850 ATCAAATAAAACTGTT 865
Score = 158 bits (85), Expect = 2e-37
Identities = 93/97 (96%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 717 GGGAAGATTCAAAGGAAGAAGAATCCAAGAAGAGAAACAGAGTCTTCGTCACTAGATCCT 776
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 254 GGGAAGATTCAATGGAAGAAGAATCCAAGAAGAGAAACAGAGTCTTCGTCACTAGATCCT 313
Query 777 TCTTGTTTTGTGGCTAATGTCACGGTTTCGAGTCTAC 813
||||||| |||||||||||||| || |||||||||||
Sbjct 314 TCTTGTTGTGTGGCTAATGTCATGGCTTCGAGTCTAC 350
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95883040950
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5