BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg932631
Length=751
Score E
Sequences producing significant alignments: (Bits) Value
AT2G25080.1 | Symbols: ATGPX1, GPX1 | glutathione peroxidase 1 ... 1216 0.0
AT4G31870.1 | Symbols: ATGPX7, GPX7 | glutathione peroxidase 7 ... 538 3e-152
> AT2G25080.1 | Symbols: ATGPX1, GPX1 | glutathione peroxidase
1 | chr2:10668049-10670019 FORWARD LENGTH=987
Length=987
Score = 1216 bits (658), Expect = 0.0
Identities = 720/750 (96%), Gaps = 3/750 (0%)
Strand=Plus/Plus
Query 1 ACTCGTCTCCGGTAACC-AAAATGGTTTCGATAACTATTTCGTCTTCTTCATACGCACCA 59
||||||||||||||||| ||||||||||| || |||| ||| |||||||| |||| | ||
Sbjct 65 ACTCGTCTCCGGTAACCAAAAATGGTTTCCATGACTACTTCATCTTCTTCGTACGGAACA 124
Query 60 TTCTCTACAGTCTTCAACACTTCCAGACCTAATTCATCTTCAACCTTTCTCGTCCCTTCC 119
|||||||||||| |||||| ||| ||||||||||| || ||||||||||||||||||||
Sbjct 125 TTCTCTACAGTCGTCAACAGTTCTAGACCTAATTCCTCAGCAACCTTTCTCGTCCCTTCC 184
Query 120 TTCAAATTCTCCACCGGAATATCGAATTTCGCGAATCTGAGTAATGGGTTTTCTCTAAAA 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 185 TTGAAATTCTCCACCGGAATATCGAATTTCGCGAATCTGAGTAATGGGTTTTCTCTAAAA 244
Query 180 TCTCCAATTAATCCTGGGTTTCTCTTCAAGTCCCGTCCTTTCACTGTTCAAGCTAGAGCT 239
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 245 TCTCCAATTAATCCTGGGTTTCTCTTCAAGTCTCGTCCTTTCACTGTCCAAGCTAGAGCT 304
Query 240 GCTGCAGAAAAGACCGTTCACGACTTCACCGTTAAGGACATTGATGGGAAAGATGTTGCT 299
||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 305 GCTGCAGAAAAAACCGTTCACGATTTCACCGTTAAGGACATTGATGGGAAGGATGTTGCT 364
Query 300 TTGAACAAATTTAAGGGGAAAGTTATGTTGATTGTCAATGTTGCTTCAAGATGTGGTTTG 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365 TTGAACAAATTCAAGGGGAAAGTTATGTTGATTGTCAATGTTGCTTCAAGATGTGGTTTG 424
Query 360 ACATCATCAAATTACTCAGAGCTTTCACATCTGTACGAGAAATACAAAAGC-CAAGGATT 418
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 425 ACATCATCAAATTACTCAGAGCTTTCACATCTGTACGAGAAATACAAAA-CTCAAGGATT 483
Query 419 TGAGATTCTAGCTTTTCCCTGCAATCAGTTTGGTTTCCAAGAGCCCGGGTCAAACTCGGA 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 484 TGAGATTCTAGCTTTTCCCTGCAATCAGTTTGGTTTCCAAGAGCCCGGGTCAAACTCCGA 543
Query 479 GATCAAACAATTTGCTTGCACCCGGTTTAAAGCAGAGTTCCCTATATTTGATAAGGTTGA 538
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 544 GATCAAACAATTCGCTTGCACCCGGTTTAAAGCAGAGTTCCCTATATTTGATAAGGTTGA 603
Query 539 CGTGAATGGACCAAGCACAGCGCCCATCTACGAATTCTTGAAATCAAACGCAGGAGGATT 598
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 604 CGTGAATGGACCAAGCACAGCGCCGATCTACGAGTTCTTGAAATCAAACGCAGGAGGATT 663
Query 599 CTTGGGTGGTCTCATTAAATGGAACTTTGAAAAGTTTTTGATCGATAAAAAGGGAAAGGT 658
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct 664 CTTGGGTGGTCTCATTAAATGGAACTTTGAGAAGTTCTTGATTGATAAAAAGGGAAAGGT 723
Query 659 CGTTGAGAGGTACCCTCCCACCACATCCCCTTTCCAAATCGAGAAAGACATCCAGAAGTT 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 724 CGTTGAGAGGTACCCTCCCACCACATCCCCTTTCCAAATCGAGAAAGACATCCAGAAGTT 783
Query 719 GCTTGCCGCTTAAAAACTTTTGCTCATGAG 748
||||||||||||||||||||||||||||||
Sbjct 784 GCTTGCCGCTTAAAAACTTTTGCTCATGAG 813
> AT4G31870.1 | Symbols: ATGPX7, GPX7 | glutathione peroxidase
7 | chr4:15410205-15411617 FORWARD LENGTH=702
Length=702
Score = 538 bits (291), Expect = 3e-152
Identities = 526/638 (82%), Gaps = 22/638 (3%)
Strand=Plus/Plus
Query 105 TTTCTCGTCCCTTCCTTCAAATTCTCCACCGGAATATC-GAATTTCGCGAATCTGAGTAA 163
||||||| ||| || || | |||||||||| ||| ||| || ||| ||||| ||||||
Sbjct 76 TTTCTCGGCCCATCATTGAGATTCTCCACCAGAACATCAAAAACTCG-GAATCCGAGTAA 134
Query 164 TGGGTTTTCTCTAAAATC-TCCAATTAATCCTGGGTTTCTCTTCAAGTCCCGTCCTTTCA 222
|||| |||| | ||||| | ||| || || | ||||||| |||| || |||||
Sbjct 135 TGGGGTTTCAGTGAAATCGT-CAAATAGTCATAGGTTTCTAGTCAAATCTAAAAATTTCA 193
Query 223 CTGTTC-AAGCTAGAGCTGCTGCAGAAAAGACCGTTCACGACTTCACCGTTAAGGACATT 281
|| || | || || ||||| ||||| ||| | |||||||| ||||| || ||||||||
Sbjct 194 GTG-TCTATGCAAGGGCTGCAGCAGAGAAGTCTGTTCACGATTTCACTGTAAAGGACATC 252
Query 282 GATGGGAAAGATGTTGCTTTGAACAAATTTAAGGGGAAA-GTTATGTTGATTGTCAATGT 340
||||| || |||||| || || ||||||| || || ||| || ||||||| || || ||
Sbjct 253 GATGGTAATGATGTTTCTCTGGACAAATTCAAAGGAAAACCTT-TGTTGATCGTTAACGT 311
Query 341 TGCTTCAAGATGTGGTTTGACATCATCAAATTACTCAGAGCTTTCACATCTGTACGAGAA 400
||| ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct 312 TGCGTCAAGATGTGGTTTGACATCATCAAATTACTCAGAGCTTTCTCAACTGTACGAAAA 371
Query 401 ATACAA-AAGCCAAGGATTTGAGATTCTAGCTTTTCCCT-GCAATCAGTTTGGTT-TCCA 457
|||||| || |||||||||||||||||| ||||| |||| ||||||| ||||| || |
Sbjct 372 ATACAAGAA-CCAAGGATTTGAGATTCTTGCTTT-CCCTTGCAATCAATTTGGAGGTC-A 428
Query 458 AGAGCCCGGGTCAAACTCGGAGATCAAACAATTTGCTTGCACCCGGTTTAAAGCAGAGTT 517
||| ||||| |||||| | |||||||| |||||||||||||||||||| |||||||||||
Sbjct 429 AGAACCCGGTTCAAACCCTGAGATCAAGCAATTTGCTTGCACCCGGTTCAAAGCAGAGTT 488
Query 518 CCCTATATTTGATAAGGTTGACGTGAATGGACCAAGCACAGCGCCCATCTACGAA-TTCT 576
||||||||| || |||||||| |||||||||||||||||||| || |||||| || ||||
Sbjct 489 CCCTATATTCGACAAGGTTGATGTGAATGGACCAAGCACAGCTCCAATCTAC-AAGTTCT 547
Query 577 TGAAATCAAACGCAGGAGGATTC-TTGGGTGGTCTCATTAAATGGAACTTTGA-AAAGTT 634
||||||| || || || || ||| |||| || | |||| |||||||||||||| ||| ||
Sbjct 548 TGAAATCCAATGCTGGTGGTTTCCTTGG-TGATATCATCAAATGGAACTTTGAGAAA-TT 605
Query 635 TTTGATCGATAAAAAGGG-AAAGGTCGTTGAGAGGTACCCTCCCACCACATCCCCTTTCC 693
||| | ||||||||||| |||| | || ||||| ||||||||||| || || |||||||
Sbjct 606 CTTGGTTGATAAAAAGGGCAAAGTT-GTCGAGAGATACCCTCCCACAACTTCTCCTTTCC 664
Query 694 AAATCGAGAAAGACATCCAGAAGTTGCTTGCCGCTTAA 731
|||||||||| |||||||||||||||||||| ||||||
Sbjct 665 AAATCGAGAAGGACATCCAGAAGTTGCTTGCGGCTTAA 702
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 36469990722
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5