BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932698 Length=505 Score E Sequences producing significant alignments: (Bits) Value AT2G25482.1 | Symbols: | Protein of unknown function (DUF784) ... 593 4e-169 > AT2G25482.1 | Symbols: | Protein of unknown function (DUF784) | chr2:10845884-10846348 REVERSE LENGTH=465 Length=465 Score = 593 bits (321), Expect = 4e-169 Identities = 419/467 (90%), Gaps = 4/467 (1%) Strand=Plus/Plus Query 21 ATGGAGAATAAAACCATTCTCATGACAtttttttCAGTTATGGTTTTGCTATCATTTTTT 80 ||||| |||||||||||| || || |||| |||||| | |||||||||||||||| |||| Sbjct 1 ATGGAAAATAAAACCATTTTCTTGGCATTGTTTTCAATCATGGTTTTGCTATCATATTTT 60 Query 81 AATCAAAGTTTGGCCATAGCAGCCGATCTTGAAGAAATGCTAATCAACGAGTTTGATGTG 140 |||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 61 AATCCAAGTTTGGCCATAGCAGCCGATCTTGAGGAGATGCTAATCAACGAGTTTGATGTG 120 Query 141 GTGCTTAAACATTGGCCGAGTCCAGGTGATTATAATCTCAACGTTATACGTGGACAATCA 200 |||||||||||||||||||| || ||||||||||||||||| ||||| ||||||||| || Sbjct 121 GTGCTTAAACATTGGCCGAGCCCGGGTGATTATAATCTCAATGTTATCCGTGGACAACCA 180 Query 201 AGAAAACATCTCAAATATCTTCTTAACTGCGGTGTAAAAATGGGACCTGGTGGGACTGAA 260 |||||||||||||||||||||||| | |||| |||||||||||| ||||||| | |||| Sbjct 181 AGAAAACATCTCAAATATCTTCTTGATTGCGCAGTAAAAATGGGAGCTGGTGGAAATGAA 240 Query 261 TGTAACATTGAATATA-GAGACGGAATTTCTCGGAACAAAAGTACTTCGAGAGATTGTTG 319 |||||||||||| ||| |||||| | ||||||||||||||||| ||||| ||||||||| Sbjct 241 TGTAACATTGAA-ATAAGAGACGTATTTTCTCGGAACAAAAGTTTTTCGAAAGATTGTTG 299 Query 320 TCTGATGATAGTGAAAGCTGGCAAGCAA-TGCCACACAGAATTGATGAAGTTGTTTTTGC 378 || | || ||||||||| ||||| | || ||| ||||||||| |||||| ||||||| | Sbjct 300 TCGGGTGCTAGTGAAAGGTGGCA-GAAAATGCTACACAGAATGGATGAAAATGTTTTTTC 358 Query 379 AATTCTATCAACTCAAACGTTTTAGTTCTAAAGCTATGATCAAAACTAACGAAATATGGA 438 |||||||||||||||| |||||||||||||| || ||||||||||||||||||| ||||| Sbjct 359 AATTCTATCAACTCAACCGTTTTAGTTCTAACGCGATGATCAAAACTAACGAAACATGGA 418 Query 439 ACAAATGTTCTAATGAAACTGAAGCTATTTCACCATTTTCTGGTTAA 485 ||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 419 ACAAATGTTCTAATGGAACTGAATCTATTTCACCATTTTCTGGTTAA 465 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24112390560 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5