BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932726 Length=979 Score E Sequences producing significant alignments: (Bits) Value AT2G25660.1 | Symbols: emb2410 | embryo defective 2410 | chr2:1... 1482 0.0 > AT2G25660.1 | Symbols: emb2410 | embryo defective 2410 | chr2:10916203-10927390 REVERSE LENGTH=6754 Length=6754 Score = 1482 bits (802), Expect = 0.0 Identities = 837/854 (98%), Gaps = 2/854 (0%) Strand=Plus/Plus Query 36 CAAAATCTCTGTCTACAAGCTGAAAATCTTCGAGACTTGCTCGAGGAGATACGTGGGTAT 95 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 4129 CAAAATCTCTGTCTACAAGCTGAAAATCTTCGAGACTTGCTTGAGGAGATACGTGGGTAT 4188 Query 96 TATACTCCACCAAGTGAAGTCGTTCCTGAAGATCTAAGTCTTCCAGGTTTAGCTGAGCTC 155 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4189 TATACTCCACCAAGTGAAGTCGTTCTTGAAGATCTAAGTCTTCCAGGTTTAGCTGAGCTC 4248 Query 156 AAAGGTCATTGGCATGGTTCGCTTGATGCTAGTGGTGGAGGCAATGGAGACACTTTGGCC 215 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4249 AAGGGTCATTGGCATGGTTCGCTTGATGCTAGTGGTGGAGGCAATGGAGACACTTTGGCC 4308 Query 216 GAATTTGACTTCCATGGAGATGATTGGGAGTGGGGGACTTACAAAACACAGCGTGTTCTG 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4309 GAATTTGACTTCCATGGAGATGATTGGGAGTGGGGGACTTACAAAACACAGCGTGTTCTG 4368 Query 276 GCTACTGGTTCGTATAGCAATGATGATGGTTTACGTCTTAAGGAGATGCTTATTCAAAAA 335 |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 4369 GCTACTGGTTCGTATAACAATGATGATGGTTTACGTCTTAAGGAGATGCTCATTCAAAAA 4428 Query 336 GGAAACGCTACACTGCATGCAGATGGGACCTTATTGGGGCCAAAAACCAATCTTCATTTT 395 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 4429 GGAAACGCTACACTGCACGCAGATGGGACCTTATTGGGGCCAAAAACAAATCTTCATTTT 4488 Query 396 GCTGTTCTGAATTTCCCTGTTAGTTTGATACCTACCTTGGTTGAGGTTGTTGAATCATCA 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4489 GCTGTTCTGAATTTCCCTGTTAGTTTGATACCTACCTTGGTTGAGGTTGTTGAATCATCA 4548 Query 456 GCTACTGATCTTGTTCACTCTTTGAGGAAACTCTTGTCACCAATCAAAGGCATTTTGCAC 515 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4549 GCTACTGATATTGTTCACTCTTTGAGGAAACTCTTGTCACCAATCAAAGGCATTTTGCAC 4608 Query 516 ATGGAAGGGGATCTTAGAGGGAGTCTTGAAAAACCAGAATGTGATGTACAAGTTAGATTA 575 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 4609 ATGGAAGGGGATCTTAGAGGGAGTCTTGAAAAACCAGAATGTGATGTACAAGTTAGGTTA 4668 Query 576 TTGGATGGTGCTGTTGGTGGTATAGACCTTGGACGAGCTGAAGTTTTTGCTTCTCTTACA 635 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4669 TTGGATGGTGCTGTTGGTGGTATAGACCTTGGACGAGCTGAAGTTTTTGCTTCTCTTACA 4728 Query 636 TCTAACAGTCGTTTTCTTTTCAACTCCAACTTTGAACCATTTGTCCAAAATGGTCATGTC 695 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4729 TCTAACAGTCGTTTTCTTTTCAACTCCAACTTTGAACCATTTGTCCAAAATGGTCATGTC 4788 Query 696 CATATACAAGGAAGTGTTCCTGTTAGCTTTTCGCAGAAAAA-ATTGTCTGAGGGAGAAGA 754 ||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||| Sbjct 4789 CATATACAAGGAAGTGTTCCTGTTAGCTTTTCGCAGAAAAATAT-GTCTGAAGGAGAAGT 4847 Query 755 CAGCGAAACAGATAGAGGTGGTGCAGTGAAAATCCCTAGTTGGGCAAAAGAAAAGGAAGA 814 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 4848 CAGCGAAACAGATAGAGGTGGTGCAGTGAAAATCCCGAGTTGGGCAAAAGAGAAGGAAGA 4907 Query 815 TGATGAGAAGAGAACCTCAAGGGATAGGAGCGAAGAGAGATGGGATAGCCAACTAGCTGA 874 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 4908 TGATGAGAAGAGAACCTCAAGGGATAGGAGCGAAGAGAGATGGGACAGCCAACTAGCTGA 4967 Query 875 GAGTCTCAAGTGTT 888 |||||||||| ||| Sbjct 4968 GAGTCTCAAGGGTT 4981 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47923376238 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5