BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932839 Length=1181 Score E Sequences producing significant alignments: (Bits) Value AT1G64840.1 | Symbols: | Protein of unknown function (DUF295) ... 619 2e-176 AT2G24250.1 | Symbols: | Protein of unknown function (DUF295) ... 344 1e-93 > AT1G64840.1 | Symbols: | Protein of unknown function (DUF295) | chr1:24093558-24095399 FORWARD LENGTH=1637 Length=1637 Score = 619 bits (335), Expect = 2e-176 Identities = 559/665 (84%), Gaps = 24/665 (4%) Strand=Plus/Plus Query 527 GGAGGAGAAGAATTTGTTGTGC-TCCTCAACTACAC-TAAAAATTTGTAT-GTGTTAAGA 583 |||||||| ||||| ||||||| || || |||| | ||| |||||| | ||||| ||| Sbjct 740 GGAGGAGACGAATTCGTTGTGCTTCTTC-GCTAC-CGTAATCATTTGT-TGGTGTTGAGA 796 Query 584 AGCACTGAAATGAGATGGATGAAGCTTAAGGTAACAT-CAGATGCTTCATGCTCGGATTT 642 || |||||||||| ||||||||| | ||| ||| | || |||||||||| || ||| Sbjct 797 AGTTCTGAAATGAGGTGGATGAAGGTCAAGAAAACCTCCA-TTGCTTCATGCAAGGGTTT 855 Query 643 AGTC-GCTTTTAGAGGCAGATTTTATGCAGCCTTTCTCAACGGGGACATTTTCATTTTCG 701 |||| | ||||||||| |||||||||| | | ||||| ||||||||||||| | |||||| Sbjct 856 AGTCAG-TTTTAGAGGTAGATTTTATGTAACTTTTCTTAACGGGGACATTTACGTTTTCG 914 Query 702 ATCCTTATTCAATGCAACGGACTCCCCTGGTGCCCTCTGAGCCTC-GACGATCAAGCAAT 760 |||||||||| || ||| ||||| |||| ||||||| ||||||| | || || ||||| Sbjct 915 ATCCTTATTCGTTGGAACAGACTCTCCTGATGCCCTCAGAGCCTCTG-CGCTCGAGCAAG 973 Query 761 TATCTGATTCCATCTGGCAATGATGAGCTTTTTCTGGTTGAGAAATTCAACCCATTTCCT 820 |||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||||||| Sbjct 974 TATCTGATTCCAAATGGCAGTGATGAGCTTTTCCTGGTTGAGAAGTTCAACCCATTTCCT 1033 Query 821 GAATG-TGGTCG-AATAGATTTTAAG-CGGTTCATATGTAGAGTGAGTAGGCTAGATGAG 877 ||| | || | | | | || ||| || |||||| ||||||||||||||||||||||||| Sbjct 1034 GAA-GCTGAT-GTATTGGA-TTTGAGTCGGTTCGCATGTAGAGTGAGTAGGCTAGATGAG 1090 Query 878 GAAGCTGGTAAATGGGTTGTGGTCAGT-GATTTGGGAGACTGTGTTTTGTTTATTGGACA 936 || |||||| ||||||||| ||| | | |||||||||||| |||| |||||||||||||| Sbjct 1091 GAGGCTGGTCAATGGGTTGAGGTGA-TCGATTTGGGAGACCGTGTGTTGTTTATTGGACA 1149 Query 937 CTTTGGAAATATTTGCTGCTCGGCTAAGGAGCTTCCTCATGACTGCGGTGTGAGTGGGAA 996 |||||||||| | |||||||| ||||||||||||||| ||| || |||||||||||||| Sbjct 1150 CTTTGGAAATGTCTGCTGCTCAGCTAAGGAGCTTCCTGATGGTTGTGGTGTGAGTGGGAA 1209 Query 997 CTCAATTTTGTTCACCAATGAACCAGGCAATGTAACTTTTGCCTACAAATATGGAGTGCA 1056 ||||||||||||||||||||| |||||| ||||||| |||||||| ||||| ||||| || Sbjct 1210 CTCAATTTTGTTCACCAATGAGCCAGGCTATGTAACGTTTGCCTATAAATACGGAGTACA 1269 Query 1057 GACAGGAAGGGCTGAAGACGACCTTAAT-TGTTGGAGATTATCAAGACAGATTCGTGTGA 1115 ||||||||||| |||||||| |||||| | ||||||||| |||||| | || || || | Sbjct 1270 TACAGGAAGGGCGGAAGACGAACTTAATAT-TTGGAGATTCTCAAGAGAAATACGAGTAA 1328 Query 1116 CGATCCTCAACACATTTCCAGTTGTGGCTCTCCGGCTTGAGTGACAAGCTAAAAA-CTCA 1174 |||| ||||||||||||| ||||||||||| ||||||||| | |||||| |||| ||| Sbjct 1329 TGATCGTCAACACATTTCCTGTTGTGGCTCTTCGGCTTGAGAGGCAAGCTGAAAATCTC- 1387 Query 1175 GCTTT 1179 ||||| Sbjct 1388 GCTTT 1392 > AT2G24250.1 | Symbols: | Protein of unknown function (DUF295) | chr2:10313286-10314910 REVERSE LENGTH=1335 Length=1335 Score = 344 bits (186), Expect = 1e-93 Identities = 608/799 (76%), Gaps = 79/799 (10%) Strand=Plus/Plus Query 49 ATCATCAATGATGCCTGACTGGTCTCAGCTCCCGGATGAGCTACTAAACCTTATCTCCAA 108 |||||| || ||||| ||||||||||||||||| || |||||||| || |||||| ||| Sbjct 87 ATCATCGATAATGCCAGACTGGTCTCAGCTCCCTGAAGAGCTACTTCACATTATCT-CAA 145 Query 109 -GAATCT---GGA-CAACTGTTTTGATGTTCTTCATGCTCGTTCTGTTTGCCGTTCGTGG 163 | |||| ||| | ||| ||| |||| | ||||||| || ||||||||||| || ||| Sbjct 146 CGCATCTAGAGGATC-ACTATTTCGATGCTGTTCATGCCCGCTCTGTTTGCCGCTCATGG 204 Query 164 CGATCAACGTTTCCCTTTCCTTGTTGC-CTATTACGCCCGAGTTACTCTCTTCCCGCTTT 222 ||||| || ||||| ||||||| || | |||||||||| ||||||||||||||||| | Sbjct 205 CGATCCACATTTCCATTTCCTTCTT-CTCTATTACGCCAAAGTTACTCTCTTCCCGC--T 261 Query 223 CGCCGACTTCCCTTTTGTAAGCGAAGACTT-T--TGCACCCTCGAGAAGATCCATTTGTT 279 |||||||| | |||| ||||||| | |||||||| |||||| ||| |||||| Sbjct 262 -------TTCCCTTTAGAAAGCAAAGACTTGTGCTGCACCCTGGAGAAGGTCCCTTTGTT 314 Query 280 CCTCTATAGAGTTCGAA--CC-CCTGCTGCTGC-G-T--TACCATCCGCGTATTTTCTGG 332 ||||| |||||||| || || |||| |||||| | | | || |||| |||||||||| Sbjct 315 CCTCTTTAGAGTTCTAACTCCTCCTGATGCTGCTGATGCTTCC-TCCGAATATTTTCTGG 373 Query 333 GAGGAATAGGTCGAGATGAGTCAGAGGATCATATGGAGCTTCCATCTCCTCTTCAGTGCT 392 ||||| |||| | |||| ||||| | |||||| ||||||||||||||||||||||||||| Sbjct 374 GAGGATTAGGCCAAGATAAGTCAAATGATCATGTGGAGCTTCCATCTCCTCTTCAGTGCT 433 Query 393 CAGTGAGAGTGAAAAT-CCGAGGATCTGATCCTACCTTGATGAACATTG-TCGGCTGCCA 450 |||||| ||| || | || |||| |||| || | ||||||||||| | | | |||||| Sbjct 434 CAGTGAAAGTCAATGTTCC-AGGAACTGAGCCAATTTTGATGAACAT-GCTTGACTGCCA 491 Query 451 GATTGTCCCTCTGGGATATCAA-TACAGAATGATG---GGTTGGGATCCTGAAAAATTG- 505 ||| |||||||||| || || |||||| ||||| ||||| |||||||| ||| Sbjct 492 GATCATCCCTCTGGGCCAT-AAGTACAGATTGATGATCGGTTGCAATCCTGAAGAATACA 550 Query 506 G-GCAACAGAT-TACAGG-AG--G-----GG-GGAGGAGAAGAATTTGTTGTGCTCCTCA 554 | ||| | | | | | | | || ||||||| ||||| |||| ||||||| Sbjct 551 GTGCAGCTTTTCTTCCGCTAAACGAACAAGGAGGAGGAGGCGAATTCGTTGCGCTCCTCG 610 Query 555 ACTACACTAAAAATTTGTAT--G-TGTTAAGAAGCACTGAAATGAGATGGATGAAGCTTA 611 ||| |||| | ||||| | | |||||||||| ||||||||||||||||| |||| Sbjct 611 ACTGCACTGA---TTTGTTTTTGGTGTTAAGAAGTACTGAAATGAGATGGATTCGGCTTG 667 Query 612 AGGTAACA-TCAGA-TGCTTCATGCTC-GGATTTAGTCGCTTTTAGAGGCAGATTTTATG 668 || ||| ||| | ||||||||| | ||| ||| || |||||||||| || || |||| Sbjct 668 AGA-AACCCTCA-ACTGCTTCATG-TAAGGAGTTATTCACTTTTAGAGGAAGGTTCTATG 724 Query 669 CAGCCTTTCTC-AACGGGGACATTTTCATTTTCGATCCTTATTCAATGCAA-CGGACTCC 726 || | ||||| || ||||||| ||| || ||||||||| ||| || || || ||||| Sbjct 725 CAAC-TTTCTTTAATGGGGACACGTTCGTTATCGATCCTTCTTCGCTGGAAGCG-ACTCC 782 Query 727 CCTGGTGCCCTC-TGAGCCTCGACGATC-AAGCAATTATCTGATTCCATCTGGCAATGAT 784 ||| || || | | ||||| || || | || |||| |||||||||||||||| Sbjct 783 CCTAACACC-TCAT-A---TCGAC--TCCAA-C--TT-TCTGGTTCCATCTGGCAATGAG 831 Query 785 GAGCTTTTTCTGGTTGAGA 803 |||||||| |||||| ||| Sbjct 832 GAGCTTTTCCTGGTTAAGA 850 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57981629475 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5