BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932856 Length=1295 Score E Sequences producing significant alignments: (Bits) Value AT2G26180.1 | Symbols: IQD6 | IQ-domain 6 | chr2:11143290-11145... 2056 0.0 > AT2G26180.1 | Symbols: IQD6 | IQ-domain 6 | chr2:11143290-11145103 REVERSE LENGTH=1515 Length=1515 Score = 2056 bits (1113), Expect = 0.0 Identities = 1234/1293 (95%), Gaps = 5/1293 (0%) Strand=Plus/Plus Query 1 AGATCGAATCTTTTTCATCTATGGGTGCTTCAGGGAAATGGGTCAAGTCCATTATTGGTC 60 |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 102 AGATCGAAACTTTTTAATCTATGGGTGCTTCAGGGAAATGGGTCAAGTCCATTATCGGTC 161 Query 61 ACAAGAAGCTAGAGAAAGATGAAATCGAAAAGGGTAATGGGAAAAACAAGAAATGGAAGC 120 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 162 TCAAGAAGCTAGAGAAGGATGAAATCGAAAAGGGTAATGGGAAAAACAAGAAATGGAAGC 221 Query 121 TATGGAGGACTACTTCAGTGGATTCATGGAAGGGTTTTCGAGGTAAACATCGGTCTGAAT 180 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | Sbjct 222 TATGGAGGACTACTTCAGTAGATTCATGGAAGGGTTTTCGAGGAAAACATCGGTCTGATT 281 Query 181 CAGAGGGTCTTGATTCTTCAACTGTTTACTCTGCTGCTGTTGCTACTGTGCTTAGAGCTC 240 |||| ||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 282 CAGACGGTGTTGATTCTTCTACTGTTTACTCTGCTGCTGTTGCTACTGTTCTTAGAGCTC 341 Query 241 CTCCTAAAGATTTCAAAGCTGTAAGAGAAGAATGGGCTGCTATTAGAATCCAAACCGCTT 300 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 342 CTCCTAAAGATTTCAAAGCTGTTAGAGAAGAATGGGCTGCTATTAGAATCCAAACCGCTT 401 Query 301 TTCGTGGATTCTTGGCGAGAAGAGCGTTGAGGGCGTTGAAAGGGATAGTGAGGTTACAAG 360 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 402 TTCGTGGATTCTTGGCGAGAAGAGCGTTGAGGGCATTGAAAGGGATAGTGAGGTTACAAG 461 Query 361 CTTTAGTTAGAGGAAGACAAGTGAGGAAACAAGCAGCTGTGACATTAAGATGCATGCAAG 420 ||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct 462 CTTTAGTGAGAGGAAGACAAGTTAGGAAACAAGCAGCTGTTACATTGAGATGCATGCAAG 521 Query 421 CTTTGGTGAGAGTACAAGCTCGTGTTAGAGCTCGTCGTGTGAGGATGACTGTTGAAGGAC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 522 CTTTGGTGAGAGTACAAGCTCGTGTTAGAGCTCGTCGTGTGAGGATGACTGTTGAAGGAC 581 Query 481 AAGCTGTTCAAAAGCTTTTAGATGAACACAGAACCAAATCTGATCTTTTGAAAGAAGTCG 540 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 582 AAGCTGTTCAAAAGCTTTTAGATGAACATAGAACCAAATCTGATCTCTTGAAAGAAGTCG 641 Query 541 AGGAAGGTTGGTGTGATAGGAAAGGTACTGTGGATGATATTAAGTCAAAGTTGCAGAAGA 600 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 642 AGGAAGGGTGGTGTGATAGGAAAGGTACTGTGGATGATATTAAGTCAAAGTTGCAGCAGA 701 Query 601 GACAAGAAGGTGCTTTTAAGAGAGAACGTGCTTTGGCTTATGCTCTAGCTCAAAAGCAAT 660 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 702 GACAAGAAGGTGCTTTTAAGAGGGAACGTGCTTTGGCTTATGCTCTTGCTCAAAAGCAAT 761 Query 661 GGAGGTCAACTACTAGCTCAAACCTTAAGACGAATAGTTCGATTTCATATCTTAAAAGTC 720 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 762 GGAGGTCAACTACTAGCTCAAACCTTAAGACGAATAGTTCGATTTCGTATCTTAAAAGTC 821 Query 721 AAGAGTTTGATAAGAATAGTTGGGGATGGAGTTGGTTGGAGCGTTGGATGGCTGCTAGGC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 822 AAGAGTTTGATAAGAATAGTTGGGGATGGAGTTGGTTGGAGCGTTGGATGGCTGCTAGGC 881 Query 781 CATGGGAGACTAGACTTATGGACACTGTTGATGCCGCTGCCACGCCTCCTCCTCCGCCTC 840 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 882 CATGGGAGACTAGACTTATGGACACTGTTGATACCGCTGCCACGCCTCCTCCTCTGCCTC 941 Query 841 ATAAGCATTTGAAATCACCTGAAACCGTGGATGTTGTTAAAGTCAGAAGAAACAATGTGA 900 |||| |||||||||||||| ||||| | |||||||||| |||| |||||||||||||||| Sbjct 942 ATAAACATTTGAAATCACCGGAAACTGCGGATGTTGTTCAAGTTAGAAGAAACAATGTGA 1001 Query 901 CCACTAGGGTATCTGCAAAACCTCCTCCTCATATGTTGTCTTCAAGTCCTGGTTATGAGT 960 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1002 CCACTAGAGTATCTGCAAAACCTCCTCCTCATATGCTGTCTTCAAGTCCTGGTTATGAGT 1061 Query 961 TTAATGAAAGCTCCGGTTCATCTTCGATTTGTACTTCAACTACACCTGTTTCTGGAAACA 1020 |||| || ||||| |||||||| |||||||||||||||||||| |||||||||||||| | Sbjct 1062 TTAACGAGAGCTCAGGTTCATCCTCGATTTGTACTTCAACTACGCCTGTTTCTGGAAAAA 1121 Query 1021 CTGGCCTTGTTTCAGACAACTCTAGCAGTCAAGCAAAAAAGAACAAGCCAAGTTACATGA 1080 |||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct 1122 CTGGACTTGTTTCAGATAACTCTAGCAGTCAAGCAAAAAAGCACAAGCCAAGTTACATGA 1181 Query 1081 GCTTGACTGAATCAACAAAGGCTAAGCGAAGAACTAACCGCGGTCTCAGGCAATCTATGG 1140 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1182 GCTTGACTGAATCGACAAAGGCTAAGCGAAGAACTAACCGCGGTCTCAGGCAATCTATGG 1241 Query 1141 ATGAGTTTCAGTTTATGAAGAACTCTGGATTGTTTACTGGGGAGTTGAAGACTAGTCATG 1200 ||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| | Sbjct 1242 ATGAGTTTCAGTTTATGAAGAACTCTGGAATGTTTACAGGGGAATTGAAGACTAGTCCTT 1301 Query 1201 CCTCAGATCCTTCCTATGTTAGTTTCTCTAAACCACTCGTTGTTCCTACTCGATTCGAGA 1260 |||||||||||| | |||||||||||| |||||||||| |||||||||||||||||||| Sbjct 1302 CCTCAGATCCTT--T-TGTTAGTTTCTCCAAACCACTCGGTGTTCCTACTCGATTCGAGA 1358 Query 1261 AGCTGAGAGGGTAA-TGTGACCTTGTTTAGATT 1292 ||| |||||| ||| |||||||||||| ||||| Sbjct 1359 AGCCGAGAGGTTAAATGTGACCTTGTT-AGATT 1390 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 63704491605 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5