BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932867 Length=304 Score E Sequences producing significant alignments: (Bits) Value AT2G22740.2 | Symbols: SUVH6 | SU(VAR)3-9 homolog 6 | chr2:9662... 176 1e-43 > AT2G22740.2 | Symbols: SUVH6 | SU(VAR)3-9 homolog 6 | chr2:9662638-9666981 REVERSE LENGTH=2588 Length=2588 Score = 176 bits (95), Expect = 1e-43 Identities = 181/219 (83%), Gaps = 19/219 (9%) Strand=Plus/Plus Query 1 TTGTGAATGGAAATAGGTGTTA-TATATGGAGAATAATAAGATAGTACATAAAGAGACAT 59 |||||||||||||| || | | | |||||||||| | ||| ||||||| |||| || Sbjct 120 TTGTGAATGGAAAT-GG-G--AGT-TATGGAGAAT--T-TGATGGTACATACGGAGATAT 171 Query 60 CAAAGATTAAGTCGT-TGAACAATAGAGAGGTTTTAGTGGAGAAACGAGGAGTGTCAGTT 118 ||||| ||||||| | || |||| | || | |||||||||||||||||||||||| Sbjct 172 CAAAGGTTAAGTC-TCAGAGCAATGGTGA-G-----GTGGAGAAACGAGGAGTGTCAGTT 224 Query 119 TTGGAGAATGGAGGTGTTTGCAAGATTGATCGTATGACAGGGCTAAAGTTCAAGCGCCGG 178 ||||||||||| |||||||||||| ||||||| |||| ||||| ||||| ||||| ||| Sbjct 225 TTGGAGAATGGTGGTGTTTGCAAGCTTGATCGAATGAGTGGGCTTAAGTTTAAGCGTCGG 284 Query 179 AATGTTTTTGCTGTGAGGGA-TTTCCCACCGGGTTGTGG 216 || ||||||||||||||||| ||||| |||||||||||| Sbjct 285 AAGGTTTTTGCTGTGAGGGACTTTCC-ACCGGGTTGTGG 322 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14074969720 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5