BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg932872

Length=267
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G54430.1 | Symbols: ATPHOS32, PHOS32 | Adenine nucleotide al...   239    1e-62


> AT5G54430.1 | Symbols: ATPHOS32, PHOS32 | Adenine nucleotide 
alpha hydrolases-like superfamily protein | chr5:22097166-22099758 
REVERSE LENGTH=1101
Length=1101

 Score =  239 bits (129),  Expect = 1e-62
 Identities = 147/156 (94%), Gaps = 0/156 (0%)
 Strand=Plus/Plus

Query  79   CCTCTCAGAACTCAAATTGAAGATCCAAACGCTCAGTCTCAGCCTAGTCAAGAGCATTTT  138
            ||||| | |||||||||||||||||||||||||||  |||| |||||||||||| |||||
Sbjct  357  CCTCTGAAAACTCAAATTGAAGATCCAAACGCTCAACCTCAACCTAGTCAAGAGGATTTT  416

Query  139  GATGCTTTTACTTCAACCAAAGTTGCGGATCTAGCTAAGCCGTTGAAGGAATTAGGGTTT  198
            ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct  417  GATGCTTTTACTTCAACAAAAGTTGCGGATCTAGCTAAACCGTTGAAGGAGTTAGGGTTT  476

Query  199  CCTTATAAGATCCATATAGTGAAAGATCATGATATG  234
            ||||||||||||||||||||||||||||||||||||
Sbjct  477  CCTTATAAGATCCATATAGTGAAAGATCATGATATG  512



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12215063007


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5