BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg932954
Length=2659
Score E
Sequences producing significant alignments: (Bits) Value
AT5G06350.1 | Symbols: | ARM repeat superfamily protein | chr5... 2416 0.0
AT5G27010.1 | Symbols: | ARM repeat superfamily protein | chr5... 2254 0.0
> AT5G06350.1 | Symbols: | ARM repeat superfamily protein | chr5:1938781-1944357
FORWARD LENGTH=2794
Length=2794
Score = 2416 bits (1308), Expect = 0.0
Identities = 2288/2736 (84%), Gaps = 168/2736 (6%)
Strand=Plus/Plus
Query 21 ATGGTTCGCTCCAAAGCTCCTGCGAAGAAGCAGC-------A--AATTGATTTCAAGAAA 71
|||||||||||||| |||||||| |||||||||| | ||||||||||||||||
Sbjct 1 ATGGTTCGCTCCAAGGCTCCTGCAAAGAAGCAGCAAAAGAAAGGAATTGATTTCAAGAAA 60
Query 72 ATCAAGAGAAAGCTGGGGAGAAAATTACCTCCACCAAAAAATGCAACTAACACAGAGATT 131
|| ||||||||||| |||||||||||||| |||||||| |||||||| ||||| ||||||
Sbjct 61 ATTAAGAGAAAGCTCGGGAGAAAATTACCACCACCAAAGAATGCAACCAACACTGAGATT 120
Query 132 AAATCCAAAGAAATTATAATTCCTGAGCAAAGTGTGGCAGCAGAAAAGACTGGCTTTGCT 191
|||||||||| ||||||| ||||||||||||||||||| || ||||||| |||||| |||
Sbjct 121 AAATCCAAAGCAATTATACTTCCTGAGCAAAGTGTGGCTGCTGAAAAGAGTGGCTTAGCT 180
Query 192 ACAAGTAATAAAAACTTGACCTTGGAGGAGCTTCTAG-TAC-GAAGTCGTCATCCCAATG 249
|||||||| ||| |||||| ||| |||| ||||| | || || || ||||| |||||
Sbjct 181 ACAAGTAAGAAAGGCTTGACTTTGAAGGAACTTCT-GCCACAGACTTC-TCATCACAATG 238
Query 250 CTAAAGTTCGCAAAAATGCGTTACT-TGGTATCCAAGACCTTTT-AAAAAGTCATCCAGT 307
| |||||||||||| |||| || | ||||||| |||||||||| || || ||||||||
Sbjct 239 CCAAAGTTCGCAAAGATGCATT-GTATGGTATCAAAGACCTTTTCAAGAA-TCATCCAGA 296
Query 308 AGAGCTGCAGTCAAAGAAATATACTATCATACA-ATGTCTTAAGGG-ACGCATTAATGAT 365
|||||| |||||| | |||||| |||||||||| | | | |||| |||||||| ||||
Sbjct 297 AGAGCTACAGTCACATAAATATGCTATCATACAGA-AAC-TCAGGGAACGCATTAGTGAT 354
Query 366 GATGATAAGCAAGTGAGAAAAGCTTTTTATGAACTATTTGACACTCAGATCTTTCGTTTT 425
|||||||||| ||||||| | | ||||||| |||||||||| | | | ||||||| | ||
Sbjct 355 GATGATAAGCTAGTGAGAGATGTTTTTTATCAACTATTTGATATTGACATCTTTCCTCTT 414
Query 426 TGTAAACAAGAGGATATCAAGGGACTTATGGTGTCACCTTTGATGCTATCCATATTTCA- 484
||| | ||||||||| | |||| ||||||||||||| |||||||| || ||||||| |
Sbjct 415 TGT--A-AAGAGGATAACCAGGGCCTTATGGTGTCACTTTTGATGCCATACATATTT-AG 470
Query 485 CGCTATGGCTAATTCA-TTGATTGATGTTCGTTTGGAT-GCTTTCGCTTTTTTACACCTT 542
|||||||||| ||||| | |||||||||||||| ||| |||||| ||||| ||||||
Sbjct 471 CGCTATGGCTCATTCAGCT-ATTGATGTTCGTTT-GATGGCTTTCAAATTTTTCCACCTT 528
Query 543 GTTGTGGACTACTACCCGCCTTCATTTTCCATGTATCCTGAAGAGATTCTTGAAAACTAC 602
|||||||| | |||||||||| | |||||| || || ||||| ||||||| |||||||||
Sbjct 529 GTTGTGGAGTTCTACCCGCCTACCTTTTCCTTGGATGCTGAAAAGATTCTCGAAAACTAC 588
Query 603 AAGGATATCATTATTCAGAGCAACCATTTTTATGTGCAAGATAAAACCAATCTAAAGGTA 662
|||| || ||||| |||| || |||||||||||| ||||||||| ||| ||||||||
Sbjct 589 AAGG--AT-ATTATACAGAAAAATCATTTTTATGTGGAAGATAAAAGCAAGCTAAAGGTG 645
Query 663 GCTCTTTCCGGGTTGTCACATTGCCTCTCGCTGTTGCCATGTGATGAGATCCACACCAAA 722
|||||||| ||||||||||||||||||||| | |||||||||||||||| | ||||||||
Sbjct 646 GCTCTTTCTGGGTTGTCACATTGCCTCTCGGTTTTGCCATGTGATGAGAGCGACACCAAA 705
Query 723 TCACAGAAAAAGC-AT-TTCCAACAAAATGAAACCCTACTCGCCTATGAGCAAGATGCTG 780
||||| |||||| | ||| | || |||||||| |||||| |||||||||||||||||
Sbjct 706 TCACAAAAAAAGGGACCTTC-A-CAGAATGAAACACTACTCACCTATGAGCAAGATGCTA 763
Query 781 CAAAAGAA-G-GTT--TT--GCCCACGTCTCTGTGAGATTGAAGGAGATTGTTGGAGCCT 834
||||||| | ||| || ||||| |||| | ||||||||||||| |||||| || ||
Sbjct 764 CAAAAGATTGTGTTCGTTATGCCCATGTCTATCAGAGATTGAAGGAGGTTGTTGCAGTCT 823
Query 835 TAATCAATTGTTTCCAAGATTTCATTCCACTGCTTCGTGCTCCACGAGGATTGGATCCAC 894
||||||||||||||||||||||||||||| || ||| |||||| |||||||| ||| |||
Sbjct 824 TAATCAATTGTTTCCAAGATTTCATTCCATTGATTCATGCTCCGCGAGGATTCGATGCAC 883
Query 895 AATCATTAATTGATTGCGTGCACCATATCCT-CTGCAGCATATGTTATGCCATCAAGTTT 953
| ||||| | |||||| | || ||||| || | |||||||| ||||||| |||||||||
Sbjct 884 ATTCATT--T-GATTGCATACAACATATACTTC-GCAGCATAGGTTATGCAATCAAGTTT 939
Query 954 TCGCA--C--A--CTCA-G-ACA--CATACTGCA-----AC-TGAAGAAGAAGAAGTTAC 997
|| || | | | || | | | || |||||| || || | |||||||||||
Sbjct 940 TC-CATTCGTAGGCACAAGCAAAGACAGACTGCATGGCGACCTGCATCTGAAGAAGTTAC 998
Query 998 TCTGATGAAACTGGATCACCACATTTCATCAATGTTATCAAAAAAGTTACTTGCTTCTTT 1057
|||||||| | ||||||| ||||| |||| ||| | | |||||||||||||| ||| ||
Sbjct 999 TCTGATGATATTGGATCAGGACATTGCATCGATGCTGTTAAAAAAGTTACTTGGTTCATT 1058
Query 1058 TCCCCTT-ATTCCC-AAAATC--TGCGTTTCTA-AAAGGAATGATGA-AAGCTACTTTAT 1111
|||||| || || |||| | | | ||| | ||||| |||||| ||| |||||||
Sbjct 1059 TCCCCTCGAT-CCAGAAAA-CAAT-C-TTTATGGAAAGGG-TGATGATAAG-TACTTTAA 1112
Query 1112 CCTCAACGGTGTATTGACAGAAATCTTTTTGGAAGTAAGTGAATGGAGCCACCTTCCTTG 1171
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1113 ACTCAACAGTGTATTGACAGAAATCTTTTTGGAAGTAAGTGAATGGAGCCACCTTCCTAC 1172
Query 1172 TGACCTTTCCTATAGATTTCTGGAATTTATTGAGAATACCCTACTAGGCAAGATCATCAG 1231
||| |||||| |||||| ||||||||||||||||||||| |||||||||||||||| |||
Sbjct 1173 TGATCTTTCCAATAGATATCTGGAATTTATTGAGAATACACTACTAGGCAAGATCACCAG 1232
Query 1232 GAGCATTAGTC--C--ACC--TATTCACGAAAA-AGCTTTGCTTGCACTCGTGCCTTTTG 1284
||||||||| | | | |||||||||||| | |||| ||||||||| |||| |||
Sbjct 1233 GAGCATTAGGCTTCGTAAAGATATTCACGAAAAGA-CTTTACTTGCACTCTTGCCCTTTC 1291
Query 1285 TTCCAAAACTTACTT-TGAGGGTGGACCGTGATTGGAGAGATAAACTGATGCAGGCGTTC 1343
|||||||||||| || ||||||| |||||||||||||||||||| || || |||| ||
Sbjct 1292 TTCCAAAACTTA-TTCTGAGGGTAGACCGTGATTGGAGAGATAATCTTCTGGAGGCATTT 1350
Query 1344 ACTATTACTTTAAGCGATTGCAAACCAGAGTCTCCACTTCAA-TTAGCCTGCATTTCAAT 1402
|||||||| || ||||||||||||||||||||| ||| ||| ||||||||||||||||
Sbjct 1351 ACTATTACCTTCAGCGATTGCAAACCAGAGTCTAAACT-CAAATTAGCCTGCATTTCAAC 1409
Query 1403 TGTTAGAGA-ACTGATTATCCCTAATGGAAATATCCTTTATCCCAATG-A--T---CCAA 1455
||||||||| | ||||||||||||||||| |||||||||||||||||| | | ||||
Sbjct 1410 TGTTAGAGACA-TGATTATCCCTAATGGAGATATCCTTTATCCCAATGCAAGTGATCCAA 1468
Query 1456 CCGTAGATAACTACCAGCGT-GCTTGGGTCAACAAACTTCCGTCACTGCTTCATCAGTTG 1514
| ||| || |||||||| || |||||||||||||||||||| || |||||| ||||||||
Sbjct 1469 CGGTACATTACTACCAG-GTTGCTTGGGTCAACAAACTTCCATCGCTGCTTAATCAGTTG 1527
Query 1515 GGTGATAAGCATCCCGTTTCTACCCAGGTTGTTTTGCAACTTTTGCTTGACCTTGGGCGA 1574
||| || |||||||||| ||||| |||||||| |||||||| || || ||||||||||||
Sbjct 1528 GGTAATGAGCATCCCGTATCTACTCAGGTTGTGTTGCAACTCTTACTCGACCTTGGGCGA 1587
Query 1575 GTTGGGTTTCTGAAGAATACTTCCCCTGCATTTGAAGAAGGCGTCAGAAACTTCTTCAAC 1634
||||||| |||||| | ||||||| | | |||||| | | ||||||||||||||| |
Sbjct 1588 GTTGGGTGTCTGAA---TGCTTCCCCCACCTGTGAAGATGACATCAGAAACTTCTTCAGC 1644
Query 1635 CCTTATCAGGGAGAAGGTGATGTGCCTGGTGGACCATTTGCAAGTCTCCCTAGGGAAGCC 1694
| || |||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||
Sbjct 1645 CTTTGTCAGGGAGAAGGTGATGTACCTGGTGGACCTTTTGCAAGTCTCCCTCGGGAAGCC 1704
Query 1695 CAAGAACTTGCTCTCTCTTTCCTTTACTACTTCACCATAGACCATTTCAGCTCCCCTATG 1754
|||||||| ||||||| |||||||||||||||||||| |||| | |||||||||||||||
Sbjct 1705 CAAGAACTGGCTCTCTGTTTCCTTTACTACTTCACCACAGACAAATTCAGCTCCCCTATG 1764
Query 1755 CTGAGAGCAATAGTTTCATGCTGTTTATATGAACAACTTAAACCAGCTGTGTTGTATCGG 1814
||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 1765 ATGAAAGCAATAGTTTCATGCTGTTTATATCCACAACTTGAACCAGCTGTGTTGTATCGG 1824
Query 1815 ATAGTGGAAATTCTTCACACTGCGTATAGAGATGGATATATTCAGATTACAGATCATTTT 1874
||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||
Sbjct 1825 ATAGTGGAAATTCTTCACACTGCCTATAGAGCTGGATATATCCAGATTACAGATCATTTT 1884
Query 1875 AGCTTC-TTCATCACTCT-AATTGCGCGTTTCAAAGTTGTCCCTCCAGAGA-TGGGG--A 1929
|||||| || ||||| || |||||| ||||||||||||||||| ||| | || | |
Sbjct 1885 AGCTTCCTT-ATCAC-CTTAATTGCACGTTTCAAAGTTGTCCCAG-AGAAACTGCAGTCA 1941
Query 1930 T---T-GAGTGTGATGAGCGGCGGGAGACA-------ACATTCAAAGCACTTACAAACCT 1978
| | |||||| |||| ||| | || | | ||||| |||| | ||||||| ||
Sbjct 1942 TCGATAGAGTGTAATGAACGG-GAGACATATTGTGGCACATTTAAAGAAGTTACAAAGCT 2000
Query 1979 TGTGTGCTCATGTTTGTCAGGAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGAGAA 2038
|||||||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||
Sbjct 2001 TGTGTGCTCATGTTTGTCAGAAATGGGTGATAGTTCTCTTGTCCTTCAGATTGTAGAGAA 2060
Query 2039 AGCTTTTG-TCGAACAAATAGGCAAATACTTTATTTTGAAGCCTGCTTTGGACAATGGGT 2097
|| |||| |||||||||||| | ||| ||||||||| ||||| |||||||
Sbjct 2061 AG-TTTTACTCGAACAAATAG-----T--TTT-----GAAGCCTGCGTTGGATAATGGGT 2107
Query 2098 GTGGCATACTCAGGATGATCTGCACGTTGGACTCTAAACCC-ACCAGACTTTCTGAAAGC 2156
||| ||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||
Sbjct 2108 GTGCCATACTCAGGATGATCTGCGTGTTGGACTCTAC-CCCTACCACACTTTCTGAAAGG 2166
Query 2157 AGTGTAACCACTCTAAGTGAATTCTTGCCGGGGTATTTGATGGATATAGTCAATTGTATA 2216
|||||||||||||||||||| ||||| ||||| ||| |||| | |||||||||||||||
Sbjct 2167 AGTGTAACCACTCTAAGTGAGTTCTTACCGGGATATATGATCAACATAGTCAATTGTATA 2226
Query 2217 CCAGAAGATAAGGAGAAGTCTTCTTACCTTTACATACAAACATGTCTCTACTATTTAGTA 2276
||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 2227 CCAGAGGATAAGGAGAA--CT-CTTACCTTTACATACAAACATGTCTCTACTATTTAGTA 2283
Query 2277 CCTTGCTTTTTGCT-GTTTGACCGGAGCTCCAAACTCACAGAAGAGGTTCTGAAAAGATT 2335
||||||| ||| || ||| | ||||||||||||||||||||| ||||||||| |||| |
Sbjct 2284 CCTTGCTATTT-CTTGTTCAATCGGAGCTCCAAACTCACAGAACAGGTTCTGATAAGAAT 2342
Query 2336 GCGATTGATGGTTAGTGAAAACACTAAAGCGATGCTGGAATC---ACCGGTCTGGGAGAG 2392
||||| ||| ||||||||||||| |||||| || ||||| || | | |||||||
Sbjct 2343 GCGATCAATGATTAGTGAAAACACAAAAGCG---CTAGAATCGGTACAAGACAGGGAGAG 2399
Query 2393 CAGTCGAAACTTGTTGAATTTGATACAATGCATTGTCTCTGTGATCCTGCTGATGCACAA 2452
| ||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 2400 CGGTCGAAACTCATTGAATATGATACAATGCATTATCTCTGTGATCCTGCTGATGCACAA 2459
Query 2453 CGACGTCAGAGTTAGGAAGATAATATCATCATTCAAGTCAGAGATCGATTTGATTCTGCA 2512
|||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||| ||
Sbjct 2460 CGACGTCAAAGTTAGGAAGATAATATCGTCATTCAAGCCCGAGATCGATTTGATTCTTCA 2519
Query 2513 CAGCGTTGTCACGTTGCAGTCCTC--GA-GCATGA-C---A--GTAGAAGGAAAGCATAT 2563
| |||| |||||||||||||||| || ||| || | | |||||||||||||||||
Sbjct 2520 GAACGTTATCACGTTGCAGTCCTCACGAAGCACGAGCTTGACTGTAGAAGGAAAGCATAT 2579
Query 2564 GATGAAGATTGCAGGAGAGCGACTTAGGATTGCATCCAATAGCTTA---G--TAA----G 2614
|||||| ||||| |||||||||||||||||||| ||||| |||||| | ||| |
Sbjct 2580 GATGAAAATTGCGGGAGAGCGACTTAGGATTGCGTCCAAAAGCTTACTCGCGTAATTAAG 2639
Query 2615 TTGTACAACTGTGACAATAGAATGATTTGTGCTCTC 2650
|| ||||||||| ||| || ||||||||||||||||
Sbjct 2640 TTCTACAACTGTAACA-TAAAATGATTTGTGCTCTC 2674
> AT5G27010.1 | Symbols: | ARM repeat superfamily protein | chr5:9503315-9507569
REVERSE LENGTH=2592
Length=2592
Score = 2254 bits (1220), Expect = 0.0
Identities = 2186/2628 (83%), Gaps = 163/2628 (6%)
Strand=Plus/Plus
Query 56 AATTGATTTCAAGAAAATCAAGAGAAAGCTGGGGAGAAAATTACCTCCACCAAAAAATGC 115
||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 45 AATCGATTTCAAGAAAATCAAGAGAAAGCTCGGGAGAAAATTACCTCCACCAAATAATGC 104
Query 116 AACTAACACAGAGATTAAATCCAAAGAAATTATAATTCCTGAGCAAAGTGTGGCAGCAGA 175
|||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct 105 AACTAACACAGAGATTAAATCCAAAGCAATTATACTTCATGAGCAAAGTGTGGCAGCAGA 164
Query 176 AA-AGACTGGCTTTGCTACAAGTAATAAAAACTTGACCTTGGAGGAGCTTCTAGTA-CGA 233
|| ||| |||||| ||||||||||| ||| ||||||||| |||||| || | |||
Sbjct 165 AAGAGA-TGGCTTCGCTACAAGTAAGAAAGGTTTGACCTTGCTTGAGCTT-AAGAACCGA 222
Query 234 AGTCGTCATCCCAATGCTAAAGTTCGCAAAAATGCGTTACTTGGTATCCAAGACCTTTTA 293
| | | |||||||||||||||||||||||| |||| |||| ||||||| |||| ||||||
Sbjct 223 ACTGGGCATCCCAATGCTAAAGTTCGCAAAGATGCATTACATGGTATCAAAGATCTTTTA 282
Query 294 AAA-AGTCATCCAGTAGAGCTGCAGTCAAAGAAATATACTATCATACA-AT-GTCTTAAG 350
||| | |||||| | |||||||| |||||| |||||| ||| | |||| || ||| ||
Sbjct 283 AAACA-TCATCCTGCAGAGCTGCTGTCAAATAAATATGCTA-C-TACACATAAACTT-AG 338
Query 351 -GGACGCATTAATGATGATGATAAGCAAGTGAGAAAAGCTTTTTATGA-ACTATTTGACA 408
| || ||||| ||||||||||||| ||| ||| | | ||||||| | |||| ||| |
Sbjct 339 AGAACTCATTACTGATGATGATAAGTTAGTAAGAGACGATTTTTAT-ACACTA-TTG--A 394
Query 409 CTCAGATCTTTCGTT-TTTGTAAACAAGAGGATA-T--CAAGGGACTTATGGTGTCACCT 464
|| |||||||| || |||| | ||||||||| | |||||| |||||||| ||| |
Sbjct 395 CTGGGATCTTTC-TTGCTTGT--A-AAGAGGATATTAACAAGGGTCTTATGGTTTCAAGT 450
Query 465 TTGATGCTATCCATATTTCA-CGCTATGGCTAATTCAT-TGATTGATGTTCGTTTGGAT- 521
||||||| || ||||||| | ||||||| |||| |||| | ||||| |||||||| |||
Sbjct 451 TTGATGCCATACATATTT-ACCGCTATGACTAAGTCATCT-ATTGAAGTTCGTTT-GATG 507
Query 522 GCTTTCGCTTTTTTACACCTTGTTGTGGACTACTACCCGCCTTCATTTTCCATGTATCCT 581
|||||| ||||| | ||||||| |||| | ||| ||||| | || ||| | ||| ||
Sbjct 508 GCTTTCAAATTTTTCCGCCTTGTTTTGGAGTTTTACTCGCCTACCTTCTCCTTATATGCT 567
Query 582 GAAGAGATTCTTGAAAACTACAAGGATATCATTATTCAGAGCAACCATTTTTATGTGCAA 641
||| ||||||| ||||||||||||| || ||||||| | |||||||||||| | |||
Sbjct 568 GAAAAGATTCTCGAAAACTACAAGG--AT-GTTATTCATAATAACCATTTTTATATACAA 624
Query 642 GATAAAACCAATCTAAAGGTAGCTCTTTCCGGGTTGTCACATTGCCTCTCGCTGTTGCCA 701
||||||| || || ||||||| ||||| |||||| || ||||| | ||||||||||||
Sbjct 625 GATAAAAAGAAGCTTAAGGTAGTTCTTTTGGGGTTGGCAGATTGCTTGTCGCTGTTGCCA 684
Query 702 TGTGATGAGATCCACACCAAATCACAGAAAAA-GCA-TTTCCAACAAAATGAAACCCTAC 759
|||||| ||| | ||| ||||| ||||||| | | ||| ||| ||||||| ||||
Sbjct 685 TGTGATCAGAGCGACAATGAATCAAAGAAAAAGGGACTTT--TACAGTATGAAACGCTAC 742
Query 760 TCGCCTATGAGCAAGATGCTGCAAAAGAA---G---GTTTTGCCCACGTCTCTGTGAGAT 813
|||||| ||||||||||||||| |||||| | |||||||||| ||||||| || |
Sbjct 743 TCGCCTGTGAGCAAGATGCTGCGAAAGAATGTGTTCGTTTTGCCCATGTCTCTGGGATAC 802
Query 814 TGAAGGAGATTGTTGGAGCCTTAATCAATTGTTTCCAAGATTTCATTCCACTGCTTCGTG 873
||||||||||||||| || ||||||||||||||||||||||||| ||||| | ||| ||
Sbjct 803 TGAAGGAGATTGTTGCAGTCTTAATCAATTGTTTCCAAGATTTCCTTCCATTAATTCATG 862
Query 874 CTCCACGAGGATTGGATCCACAATCATTAATTGATTGCGTGCACCATAT-CCTCTGCAGC 932
|| | | | || | || | ||||| | |||||||| | | |||||| | || | |||
Sbjct 863 CTTCGCAAAGAATCAATAAAGAATCA-T--TTGATTGCATCCGCCATATACTTC-GTAGC 918
Query 933 ATATGTTATGCCATCAAG--TT---TTC----GCACACTC--AGACACA-T-ACT-GC-A 977
||| ||||||| |||||| || ||| |||||||| ||||||| | | | || |
Sbjct 919 ATAGGTTATGCAATCAAGTTTTCCATTCGTAGGCACACTCAAAGACACACTAAATGGCTA 978
Query 978 ACTGAAGAAGAAGAAGTTACTCTGATGAAACTGGATCACCACATTTCATCAATGTTATCA 1037
|| | |||||| ||||||||||| |||||||| ||||| |||||||||||||
Sbjct 979 CCTTCACCTGAAGAAAATACTCTGATGATACTGGATCGTGACATTGCATCAATGTTATCG 1038
Query 1038 AAAAAGTTACTTGCTTCTTTTCCCCTTATTC-CCAAAATCTGCGTTTCTAAAAGGAATGA 1096
||||||||||||| ||||||||| |||| || | |||| | ||||| | | |
Sbjct 1039 AAAAAGTTACTTGGTTCTTTTCCACTTAATCACGAAAA-CAATTTTTCT-----G--T-A 1089
Query 1097 TGAAAGCTACTTTATCCTCAACGGTGTATTGACAGAAATCTTTTTGGAAGTAAGTGAATG 1156
| || | | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1090 -G--AG--A----A----CAATGGTGTATTGACAGAAATCTTTTTGGAAGTAAGTGAATG 1136
Query 1157 GAGCCACCTTCCTTGTGACCTTTCCTATAGATTTCTGGAATTTATTGAGAATACCCTACT 1216
|||||||||||||||||| |||||| |||||||||| ||||||||||||||| || ||||
Sbjct 1137 GAGCCACCTTCCTTGTGATCTTTCCAATAGATTTCTAGAATTTATTGAGAATGCCTTACT 1196
Query 1217 AGGCAAGATCATCAGGAGCATTAGTCCACCTATTCACGAAAAAG-CTTTGCTTGCACTCG 1275
||| ||||||| ||| |||| |||| | || | | ||| |||| |||||||||
Sbjct 1197 AGGAAAGATCACCAGAAGCAATAGT----C--TT---G-ATAAGACTTTACTTGCACTCT 1246
Query 1276 TGCCTTTTGTTCCAAAACTTACTT-TGAGGGTGGACCGTGATTGGAGAGATAAACTGATG 1334
|||| ||||||||||||||| ||| ||||||||||||||||| |||||||||| || |||
Sbjct 1247 TGCCCTTTGTTCCAAAACTT-CTTCTGAGGGTGGACCGTGATCGGAGAGATAATCTTATG 1305
Query 1335 CAGGCGTTCACTATTA-CTTTAAGCGATTGCAAACCAGAGTCTCCACTTCAATTAGCCTG 1393
||||| || ||||||| ||| || | ||||||||||||||||| ||||| ||||||||||
Sbjct 1306 CAGGCATTTACTATTACCTTCAA-CAATTGCAAACCAGAGTCTTCACTTAAATTAGCCTG 1364
Query 1394 CATTTCAATTGTTAGAGAACTGATTATCCCTAATGGAAATATCCTTTATCCCAATGATCC 1453
||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1365 CATTTCAGTTGTTAAAGATTTGATTATCCCTAATGGAGATATCCTTTATCCCAATGATCC 1424
Query 1454 AACCGTAGATAACTACCAGCGTGCTTGGGTCAACAAACTTCCGTCACTGCTTCATCAGTT 1513
||||||| ||||||||||||| |||||||||||||||||||| ||||||||| | |||||
Sbjct 1425 AACCGTAAATAACTACCAGCGCGCTTGGGTCAACAAACTTCCATCACTGCTTAACCAGTT 1484
Query 1514 GGGTGATAAGCATCCCGTTTCTACCCAGGTTGTTTTGCAACTTTTGCTTGACCTTGGGCG 1573
|||||||||||||| || |||||| |||||||||||||||||||||| ||||||| |||
Sbjct 1485 GGGTGATAAGCATCATGTATCTACCAAGGTTGTTTTGCAACTTTTGCTCGACCTTGCGCG 1544
Query 1574 AGTTGGGTTTCTGAAGAATACTTCCCCTGCATTTGAAGAAGGCG-TCAGAAACTTCTTCA 1632
|||||| | ||| |||| |||| || ||||||||||| | | | |||| ||||||||
Sbjct 1545 AGTTGGATGTCT---GAATGCTTCTCCAACATTTGAAGAA-GAGATAAGAAGCTTCTTCA 1600
Query 1633 ACCCTTATCAGGGAGAAGGTGATGTGCCTGGTGGACCATTTGCAAGTCTCCCTAGGGAAG 1692
||||| ||| ||||||||||| ||||| |||||||| |||| |||||||||||||||||
Sbjct 1601 TCCCTTTTCATGGAGAAGGTGAGGTGCCAGGTGGACCTTTTGTAAGTCTCCCTAGGGAAG 1660
Query 1693 CCCAAGAACTTGCTCTCTCTTTCCTTTACTACTTCACCATAGACCATTTCAGCTCCCCTA 1752
|||||| | ||||||| ||||||||||||||||| ||||||| |||||||||||||||
Sbjct 1661 TACAAGAAGTGGCTCTCTGTTTCCTTTACTACTTCATCATAGACAATTTCAGCTCCCCTA 1720
Query 1753 TGCTGAGAGCAATAGTTTCATGCTGTTTATATGAACAACTTAAACCAGCTGTGTTGTATC 1812
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1721 TGCTGAAAGCAATAGTTTCATGCTGTTTATATGAACAACTTGAACCAGCTGTGTTGTATC 1780
Query 1813 GGATAGTGGAAATTCTTCACACTGCGTATAGAGATGGATATATTCAGATTACAGATCATT 1872
||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||
Sbjct 1781 GGATAGTGGAAATTCTTCAAACTGCCTATAGAGGTGGATATATTCAGATTACAGATCATT 1840
Query 1873 TTAGCTTCTTCATCACTCTA-ATTGCGCGTTTCAAAGTTGTCCCTCCAGAGA-TG----- 1925
||||||||||||| || || ||| | ||||||||||||||||| ||| | ||
Sbjct 1841 TTAGCTTCTTCATTAC-CTTGATTTCACGTTTCAAAGTTGTCCCAG-AGAAACTGAACTC 1898
Query 1926 GG-GATTGAGTGTGATGAGCGGCGGG-AGA------CAACATTCAAAGCACTTACAAACC 1977
|| |||||||||||||||| || || | | || |||| ||| ||||||||||||
Sbjct 1899 GGCGATTGAGTGTGATGAGAGGAAGGCAAATTGTGGCA-CATTTAAAACACTTACAAACC 1957
Query 1978 TTGTGTGCTCATGTTTGTCAGGAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGAGA 2037
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1958 TTGTGTGCTCATATTTGTCAGAAATGGGTGATAGCTCTCTTGTCCTCCAGATTCTAGAGA 2017
Query 2038 AAGCTTTTGTCGAACAAATAGGCAAATACTTTATTTTGAAGCCTGCTTTGGACAATGGGT 2097
||| |||||||||||||||| | | ||| ||||||||| |||||||||||||
Sbjct 2018 AAGTTTTTGTCGAACAAATA---A--T--TTT-----GAAGCCTGCGTTGGACAATGGGT 2065
Query 2098 GTGGC-ATACTCAGGATGATCTGCACGTTGGACTCTAAACCCACCAGACTTTCTGAAAGC 2156
||| | |||||||||||||||||| |||| ||||||||||| || ||||||||||||| |
Sbjct 2066 GTG-CTATACTCAGGATGATCTGCGCGTTAGACTCTAAACCTACAAGACTTTCTGAAATC 2124
Query 2157 AGTGTAACCACTCTAAGTGAATTCTTGCCGGGGTATTTGATGGATATAGTCAATTGTATA 2216
|||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct 2125 AGTGTAACCACTCTAAGTGAATTCTTACCGGGATATTTGATCGATATAGTCAATTGTATA 2184
Query 2217 CCAGAAGATAAGGAGAAGTCTTCTTACCTTTACATACAAACATGTCTCTACTATTTAGTA 2276
||||||||||| |||| | | |||||||||| || ||||||||||| ||||||||| ||
Sbjct 2185 CCAGAAGATAAAGAGA-GA-T-CTTACCTTTATATGCAAACATGTCTGTACTATTTATTA 2241
Query 2277 CCTTGCTTTTTGCTGTTTGACCGGAGCTCCAAACTCACAGAAGAGGTTCTGAAAAGATTG 2336
||||||| || ||||| |||||||||||||||||||||||| |||||||||||||| ||
Sbjct 2242 CCTTGCTACTTCCTGTTCGACCGGAGCTCCAAACTCACAGAACAGGTTCTGAAAAGAATG 2301
Query 2337 CGAT-TGATGGTTAGTGAAAACACTAAA-GCGATGCTGGAATCAC--CG-GTCTGGGAGA 2391
|||| | |||||||||||||| |||| || || ||||||| | | | ||||||
Sbjct 2302 CGATCT-ATGGTTAGTGAAAATG-TAAAAGC-AT--TGGAATCGGTTCAAGACAGGGAGA 2356
Query 2392 GCAGTCGAAACTTGTTGAATTTGATACAATGCATTGTCTCTGTGATCCTGCTGATGCACA 2451
| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2357 GTGGTCGAGACTCATTGAATTTGATACAATGCATTGTCTCTGTGATCCTGCTGATGCACA 2416
Query 2452 ACGACGTCAGAGTTAGGAAGATAATATCATCATTCAAGTCAGAGATCGATTTGATTCTGC 2511
|||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 2417 ACGATGTCAAAGTTAGGAAGATAATATCATCATCCAAGTCAGAGATTGATTTGATTCTGC 2476
Query 2512 ACAGCGTTGT-CACGTTGCAGTCCTC--GA-GCATGA-C---A--GTAGAAGGAAAGCAT 2561
| | |||| | ||| ||||||||||| || ||| || | | |||||||||||||||
Sbjct 2477 AGAACGTT-TACACATTGCAGTCCTCACGAAGCACGAGCTTGACTGTAGAAGGAAAGCAT 2535
Query 2562 ATGATGAAGATTGCAGGAGAGCGACTTAGGATTGCATCCAATAGCTTA 2609
|||||||| ||||||| |||||||||||| ||||||||||||||||||
Sbjct 2536 ATGATGAAAATTGCAGCAGAGCGACTTAGCATTGCATCCAATAGCTTA 2583
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 132039393976
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5