BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg932970
Length=1652
Score E
Sequences producing significant alignments: (Bits) Value
AT2G26710.1 | Symbols: BAS1, CYP734A1, CYP72B1 | Cytochrome P45... 2741 0.0
> AT2G26710.1 | Symbols: BAS1, CYP734A1, CYP72B1 | Cytochrome P450
superfamily protein | chr2:11380492-11383612 FORWARD LENGTH=1970
Length=1970
Score = 2741 bits (1484), Expect = 0.0
Identities = 1599/1655 (97%), Gaps = 5/1655 (0%)
Strand=Plus/Plus
Query 1 GACCAAAGAAGAAAACTTTAGCTCTCCtttttgtgttttctctc-tttcttttttgtttt 59
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | |
Sbjct 142 GACCAAAGAAGAAAACTTTAGCTCTCCTTTTTGTGTTTTCTCTCTTTTCTTTGTTGGTGT 201
Query 60 tCCGACAATGGAGGAAGAAAGTAGCAGCTGGTTCATTCCAAAGGTTCTTGTTTTGTCTGT 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 202 TCCGACAATGGAGGAAGAAAGTAGCAGCTGGTTCATTCCAAAGGTTCTTGTTCTGTCTGT 261
Query 120 AATCTTAAGTCTTGTAATAGTGAAGGGTATGTCTCTGTTATGGTGGAGATCAAGAAAGAT 179
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 262 AATCTTAAGTCTTGTAATAGTGAAGGGTATGTCTCTGTTATGGTGGAGACCAAGAAAGAT 321
Query 180 TGAAGAACATTTCTCAAAACAAGGAATTCGAGGTCCTCCTTATCATTTCTTCATCGGAAA 239
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 322 TGAAGAACATTTCTCTAAACAAGGAATTCGAGGTCCTCCTTATCATTTCTTCATCGGAAA 381
Query 240 TGTTAAAGAACTTGTTGGAATGATGCTTAAAGCTTCTTCTCATCCTATGCCTTTCTCTCA 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 382 TGTTAAAGAACTTGTTGGAATGATGCTTAAAGCTTCTTCTCATCCTATGCCTTTCTCTCA 441
Query 300 CAATATTCTTCCTAGAGTTCTCTCTTTTTACCATCACTGGAGAAAAATCTATGGTGCTAC 359
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 442 CAATATTCTTCCTAGAGTTCTCTCTTTTTACCATCACTGGAGAAAAATCTACGGTGCTAC 501
Query 360 ATTTCTGGTCTGGTTCGGTCCAACTTTCCGGTTAACAGTAGCCGATCCCGATTTGATCCG 419
||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| |
Sbjct 502 ATTTCTGGTTTGGTTCGGTCCAACTTTCCGGTTAACGGTAGCCGATCCTGATTTGATCAG 561
Query 420 AGAGATCTTCTCTAAGTCTGAGTTCTACGAGAAAAATGAAGCTCACCCTTTGGTTAAACA 479
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 562 AGAGATCTTCTCTAAGTCTGAGTTCTACGAGAAGAATGAAGCTCACCCTTTGGTTAAACA 621
Query 480 GCTTGAAGGCGATGGACTTCTTAGTCTCAAAGGCGAAAAATGGGCTCATCATCGAAAAAT 539
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 622 ACTTGAAGGCGATGGACTACTTAGTCTCAAAGGTGAAAAATGGGCTCATCATCGAAAAAT 681
Query 540 CATTAGCCCTACTTTTCATCTGGAGAATCTTAAGTTGCTTGTACCAGTGGTGTTGAAGAG 599
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 682 CATTAGCCCTACTTTTCATATGGAGAATCTTAAGTTGCTTGTACCAGTTGTGTTGAAGAG 741
Query 600 TGTGACTGATATGGTGGATAAATGGTCCGAGAAATTATCGGAAAATGGTGAAGTTGAGGT 659
|||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||
Sbjct 742 TGTGACTGATATGGTGGATAAATGGTCCGATAAGTTATCAGAAAACGGTGAAGTTGAGGT 801
Query 660 TGATGTCTATGAGTGGTTTCAGATTTTGACTGAAGATGTTATTAGTAGAACAGCTTTTGG 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 802 AGATGTCTATGAGTGGTTTCAGATTTTGACTGAAGATGTTATTAGTAGAACAGCTTTTGG 861
Query 720 AAGTAGCTACGAAGATGGCCGCGCGA-TTTTTCGACTTCAAGCTCAACAAATGCTTCTTT 778
||||||||| |||||||| || || | |||||||||||||||||||||||||||||||||
Sbjct 862 AAGTAGCTATGAAGATGGTCGAGC-AGTTTTTCGACTTCAAGCTCAACAAATGCTTCTTT 920
Query 779 GTGCTGAAGCTTTTCAAAAAGTCTTCATTCCTGGCTATAGATTTTTTCCGACAAGAGGGA 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 921 GTGCTGAAGCTTTTCAAAAAGTCTTCATTCCTGGCTATAGATTTTTTCCGACAAGAGGGA 980
Query 839 ATTTGAAGTCTTGGAAGTTAGACAAGGAGATAAGGAAGTCATTGTTGAAGTTGATAGAGC 898
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 981 ATTTGAAGTCTTGGAAGTTAGACAAGGAGATAAGGAAGTCGTTGTTGAAGCTGATAGAGC 1040
Query 899 GGCGGAGACAGAACGCTGTAGAGGGAGACGGCGAAGAATGTAAGGAGCCGGCGGCGAAGG 958
|||||||||| |||||| |||| ||||| || ||||||||||||||||||||||||||||
Sbjct 1041 GGCGGAGACAAAACGCTATAGATGGAGAAGGGGAAGAATGTAAGGAGCCGGCGGCGAAGG 1100
Query 959 ATTTATTGGGATTAATGATTCAGGCAAAGAATGTGACGGTTCAGGACATTGTGGAGGAGT 1018
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1101 ATTTGTTGGGATTAATGATTCAGGCAAAGAATGTGACGGTTCAGGACATTGTGGAGGAGT 1160
Query 1019 GTAAAAGCTTTTTCTTCGCCGGGAAACAGACAACTTCTAATCTGCTGACGTGGACGACCA 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1161 GTAAAAGCTTTTTCTTCGCCGGGAAACAGACAACTTCTAATCTGCTGACGTGGACGACCA 1220
Query 1079 TCTTGCTATCCATGCACCCGGAGTGGCAGGCCAAAGCACGTGATGAGGTCCTCAGGGTCT 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221 TCTTGCTATCCATGCACCCGGAGTGGCAGGCCAAAGCACGTGATGAGGTCCTCAGGGTCT 1280
Query 1139 GTGGCTCACGTGATGTCCCTACCAAGGACCATGTCGTTAAGCTTAAAACGTTGAGTATGA 1198
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1281 GCGGCTCACGTGATGTCCCTACCAAGGACCATGTCGTTAAGCTTAAAACGTTGAGTATGA 1340
Query 1199 TCTTGAACGAGTCTTTAAGGTTGTATCCACCAATAGTTGCTACAATTCGACGCGCTAAAT 1258
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1341 TCTTGAACGAGTCTTTAAGGTTGTATCCACCAATAGTAGCTACGATTCGACGCGCTAAAT 1400
Query 1259 CGGATGTGAAGCTAGGAGGGTACAAAATTCCATGTGGCACGGAGCTTCTAATACCAATCA 1318
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1401 CGGATGTGAAGCTAGGAGGGTACAAAATCCCATGTGGCACGGAGCTTCTAATCCCAATCA 1460
Query 1319 TAGCGGTTCATCATGACCAAGCCATTTGGGGTAATGACGTGAACGAATTCAATCCAGCTC 1378
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1461 TAGCGGTCCATCATGACCAAGCCATTTGGGGTAATGACGTGAACGAATTCAATCCAGCTC 1520
Query 1379 GGTTTGCGGATGGAGTGCCGCGTGCTGCCAAACACCCCGTTGGCTTCATACCGTTTGGCC 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1521 GGTTTGCGGATGGAGTGCCGCGTGCTGCCAAACACCCCGTTGGCTTCATACCGTTTGGCC 1580
Query 1439 TCGGAGTTCGAACATGCATTGGTCAGAATCTTGCTATACTTCAGGCCAAATTGACACTGG 1498
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1581 TCGGAGTTCGTACATGCATTGGTCAGAATCTTGCTATACTTCAGGCCAAATTGACACTCG 1640
Query 1499 CGGTAATGATCCAACGTTTCACCTTTCACTTGGCTCCTACTTACCAGCATGCACCAACCG 1558
| |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1641 CTGTAATGATCCAACGCTTCACCTTTCACTTGGCTCCTACTTATCAGCATGCACCTACCG 1700
Query 1559 TCCTAATGTTGCTTTATCCTCAACATGGTGCACCAATCACCTTCCGGAGATTGACCAATC 1618
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1701 TCCTTATGTTGCTTTATCCTCAACATGGTGCACCAATCACCTTCCGGAGATTGACCAATC 1760
Query 1619 ATGAGGATCGCTAGAA-GATCATCAAAGGTCTAAA 1652
|||||||| | | ||| |||| |||| |||| |||
Sbjct 1761 ATGAGGATTGAT-GAAAGATCTTCAACGGTCAAAA 1794
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81626086170
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5