BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932978 Length=593 Score E Sequences producing significant alignments: (Bits) Value AT1G27750.1 | Symbols: | nucleic acid binding | chr1:9657385-9... 451 3e-126 AT2G39450.1 | Symbols: MTP11, ATMTP11 | Cation efflux family pr... 174 7e-43 > AT1G27750.1 | Symbols: | nucleic acid binding | chr1:9657385-9661958 FORWARD LENGTH=3476 Length=3476 Score = 451 bits (244), Expect = 3e-126 Identities = 368/424 (87%), Gaps = 23/424 (5%) Strand=Plus/Plus Query 1 GAAGCAGGAACAGAGATGAGATGCGAAGAGTGCATGACTGCTATAAGCGTCTCAAATCTT 60 |||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 210 GAAGTAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTTAAATCTT 269 Query 61 CTATTGGTCAGAGAGATGGTGGTGGATGCTCTGCGAATCTTGAGCAAGCGTATCGTTCCC 120 | ||| ||||||||||||||| || |||||||||||||||||||||||||||| |||| Sbjct 270 GTGTTGCTCAGAGAGATGGTGGCGGCCGCTCTGCGAATCTTGAGCAAGCGTATCGCTCCC 329 Query 121 TCATATCCGCTTCCAGAGTTAGTTGCTTATACTTGCAGGCTGTACTAGCGTTAAGCGGCC 180 |||| ||||||||| || || | | |||||||||||||||| ||| Sbjct 330 TCATCTCCGCTTCC--AG--AG--G--------T------TGTACTAGCGTTAAGC-GCC 368 Query 181 TTGTGGCTGATCTCATTCTTCGGTATGCACTATACTGCCCTACTGCTGTCGGAGATGCAT 240 |||||||||||||| ||| ||| |||||| | ||||| ||||| ||| | ||||||||| Sbjct 369 TTGTGGCTGATCTCGTTCCTCGATATGCATTGTACTGTCCTACGGCTATTGGAGATGCAG 428 Query 241 TGCAAGCTGTTATCGACATGCATAACTTCAGCGTGGAAGCTTTAAAGAGAGGACAAGATA 300 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 429 TGCAAGCTGTTATTGACATGCATAACTTCAGCTTGGAAGCTTTAAAGAGAGGACAAGATG 488 Query 301 CTGATGGTGTTGCTTTTCAAACTGCTAAAGCCTGCATATTTGGTCTGGTTGACCTATGTT 360 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 489 CTGATGGTGTTGCTTTTCAAACTGCTAAAGCCTGCATATTTGGTCTAGTTGACCTATGTT 548 Query 361 CTGCTGCTT-ATTCAAAGACAACATCATCACCAGGGGGTCGTGATATCCGCTCTGCTGTG 419 ||||||||| || | |||| ||| ||||||||||||| ||| |||||| ||||||| ||| Sbjct 549 CTGCTGCTTTAT-CGAAGAAAACGTCATCACCAGGGGCTCGAGATATCTGCTCTGCCGTG 607 Query 420 TTCA 423 |||| Sbjct 608 TTCA 611 > AT2G39450.1 | Symbols: MTP11, ATMTP11 | Cation efflux family protein | chr2:16471632-16473818 REVERSE LENGTH=1380 Length=1380 Score = 174 bits (94), Expect = 7e-43 Identities = 102/106 (96%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 459 GGTCCGGAAGACAATGTGGCAGATTATTACCAGCAACAGGTAGAGATGCTTGAGGGCTTT 518 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 249 GGTCCGGAAGACAATGTGGCAGATTATTACCAGCAGCAAGTAGAGATGCTTGAGGGCTTT 308 Query 519 ACTGAAATGGAAGAACTTGCAGAACGTGGCTTTGTTCCTGGTATGT 564 ||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 309 ACTGAAATGGATGAACTTGCAGAACGTGGCTTTGTTCCTGGAATGT 354 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28532995496 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5