BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg933035

Length=355
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G38760.1 | Symbols: ANNAT3, ANN3 | annexin 3 | chr2:16200994...   226    1e-58


> AT2G38760.1 | Symbols: ANNAT3, ANN3 | annexin 3 | chr2:16200994-16202669 
FORWARD LENGTH=1237
Length=1237

 Score =  226 bits (122),  Expect = 1e-58
 Identities = 142/152 (93%), Gaps = 0/152 (0%)
 Strand=Plus/Plus

Query  157  AGGAGAAGAAGAAGAAGAGCATAGAGAATTTGAAGGTTATAGTGGAGATCTCTTGCAAAA  216
            |||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||  |
Sbjct  385  AGGAGAAGAAGAAGAAAAGCTTAGAGAATTTGAAGGTTATAGTAGAGATCTCTTGCACGA  444

Query  217  CTTCTCCAAACCATTTGATTGTTGTGAGGAAAGCTTATTGTTCTCTCTTTCACTCATCTC  276
            |||| |||||||||||||||| ||||||||||||||||||||| |||||| |||| ||||
Sbjct  445  CTTCCCCAAACCATTTGATTGCTGTGAGGAAAGCTTATTGTTCACTCTTTGACTCTTCTC  504

Query  277  TTGAAGAACACATTGCTTCTTCTCTGCCTTTT  308
            ||||||||||||||||||||||||||||||||
Sbjct  505  TTGAAGAACACATTGCTTCTTCTCTGCCTTTT  536



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 16638624919


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5