BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg933061

Length=421
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G14240.1 | Symbols:  | Subtilase family protein | chr3:47414...   612    9e-175


> AT3G14240.1 | Symbols:  | Subtilase family protein | chr3:4741473-4744117 
REVERSE LENGTH=2645
Length=2645

 Score =  612 bits (331),  Expect = 9e-175
 Identities = 377/399 (94%), Gaps = 3/399 (1%)
 Strand=Plus/Plus

Query  1     ATGAAGCAACCAACGGGAAAATGAATGAAACGACTGAGTTTCGTTCTCCGCGTGACTCCG  60
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct  716   ATGAAGCAACCAACGGGAAAATGAATGAAACGACTGAGTTTCGCTCTCCGCGTGACTCCG  775

Query  61    ATGGACATGGGACTCACACAGCTTCAATCTCCGCCGGCCATTACGTTTTTCTGGCGTCAA  120
             ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct  776   ATGGACATGGGACTCACACAGCTTCAATCTCCGCCGGCCGTTACGTTTTTCCGGCGTCAA  835

Query  121   CTCTTGGCTATGCTCGCGGCGTCGCTGCTGGGATGGCTCCGAAAGCTAGACTCGCCGCTT  180
             |||| ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct  836   CTCTCGGCTACGCTCACGGCGTCGCTGCTGGGATGGCTCCAAAAGCTAGACTCGCCGCTT  895

Query  181   ACAAAGTCTGTTGGAACTCCGGTTGTTACGACTCCGATATCTTAGCTGCTTTTGACACCA  240
             |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| 
Sbjct  896   ACAAAGTCTGTTGGAACTCCGGTTGTTACGACTCCGATATCTTAGCCGCTTTCGACACCG  955

Query  241   CCGTAGCCGACGGTGTCGATGTCATCTCTCTCTCCGTTGGAGGCGTCGTGGTTCCTTATT  300
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  956   CCGTTGCCGACGGTGTCGATGTCATCTCTCTCTCCGTTGGAGGCGTCGTGGTTCCTTATT  1015

Query  301   ACCTCGATGCCATCGCCATTGGAGCTTTTGGAGCTATTGACAGAGGGATATTCGTCTCTG  360
             |||| || || ||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct  1016  ACCTAGACGCTATCGCTATTGGAGCTTTTGGAGCTATTGACAGAGGCATATTCGTCTCTG  1075

Query  361   CTTCCGCCGGAAACGGAGGTCCTGCTTG-TTTA-CGGTG  397
             |||||||||| ||||||||||| | | | |||| |||||
Sbjct  1076  CTTCCGCCGGTAACGGAGGTCCCGGT-GCTTTAACGGTG  1113



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 19956296353


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5