BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg933133 Length=316 Score E Sequences producing significant alignments: (Bits) Value AT5G34828.1 | Symbols: | Plant thionin family protein | chr5:1... 333 6e-91 AT5G36805.1 | Symbols: | Plant thionin family protein | chr5:1... 267 6e-71 AT5G36720.1 | Symbols: | Plant thionin family protein | chr5:1... 267 6e-71 AT5G38378.1 | Symbols: | Plant thionin family protein | chr5:1... 261 3e-69 AT3G24465.1 | Symbols: | Plant thionin family protein | chr3:8... 244 3e-64 AT1G58245.1 | Symbols: | Plant thionin family protein | chr1:2... 235 2e-61 > AT5G34828.1 | Symbols: | Plant thionin family protein | chr5:13094069-13094344 REVERSE LENGTH=276 Length=276 Score = 333 bits (180), Expect = 6e-91 Identities = 247/279 (89%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 21 ATGGCGACTCAAACAATGAAAAAGATCTACAGTGTTTTGATGATTGTAGTTTTATTTACG 80 ||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||||| Sbjct 1 ATGGCGACTCAAACAATAAAAAAGATATACAGTGTTTTGATCATTGTAGCTTTATTTACG 60 Query 81 ATGATGGTTTCAACATACGCGAGTACGGTAGAAGTGTGTGTTAAGCATTGTGTCCCGAAT 140 |||||||||||||||| ||||||||| ||||| | |||||||| ||||||||||| ||| Sbjct 61 ATGATGGTTTCAACATTTGCGAGTACGATAGAAATATGTGTTAAACATTGTGTCCCAAAT 120 Query 141 CAGTGTATGAAAGT-TTCTAAAAAGGCAACTATTCTTTTATGTGAGAATGCTTGCAAAAA 199 ||||| || ||||| || ||||||||||||| ||| |||||||||||||||||||||||| Sbjct 121 CAGTGCATAAAAGTGTT-TAAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCAAAAA 179 Query 200 ACTCTGCAACCAAGA-CAAATTTGCTCATGAGAAATACTACACAACT-CCTCCTGGAGAC 257 |||||||||||| || |||||||||||||| ||||| |||| | | | |||||| |||| Sbjct 180 ACTCTGCAACCA-GAACAAATTTGCTCATGTGAAATTCTACTCCA-TGCCTCCTCAAGAC 237 Query 258 TTATGCGAGGttttttttGGGTTACTATGTAATAATTGA 296 || ||||||| |||||||| |||||||||||||| ||| Sbjct 238 TTGTGCGAGGGATTTTTTGGTTTACTATGTAATAACTGA 276 > AT5G36805.1 | Symbols: | Plant thionin family protein | chr5:14488961-14489224 REVERSE LENGTH=264 Length=264 Score = 267 bits (144), Expect = 6e-71 Identities = 180/198 (91%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 21 ATGGCGACTCAAACAATGAAAAAGATCTACAGTGTTTTGATGATTGTAGTTTTATTTACG 80 ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 1 ATGGCAACTCAAACAATAAAAAAGATATACAGTGTTTTGATGATTGTAGTTTTATTAACG 60 Query 81 ATGATGGTTTCAACATACGCGAGTACGGTAGAAGTGTGTGTTAAGCATTGTGTCCCGAAT 140 ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 61 ATGATTGTTTCAACATACGCGAGTACGGTGGAAGTATGTGTTAAGCATTGTGTCCCGAAT 120 Query 141 CAGTGTATGAAAGTTTCTAAAAAGGCAACTATTCTTTTATGTGAGAATGCTTGCAAAAAA 200 || || |||||||||||| ||||||||||| ||| |||||||||| |||||||| |||| Sbjct 121 CAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACAAAA 180 Query 201 CTCTGCAACCAAGACAAA 218 |||||||| || ||||| Sbjct 181 CTCTGCAATGAAAACAAA 198 > AT5G36720.1 | Symbols: | Plant thionin family protein | chr5:14429661-14429924 REVERSE LENGTH=264 Length=264 Score = 267 bits (144), Expect = 6e-71 Identities = 180/198 (91%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 21 ATGGCGACTCAAACAATGAAAAAGATCTACAGTGTTTTGATGATTGTAGTTTTATTTACG 80 ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 1 ATGGCAACTCAAACAATAAAAAAGATATACAGTGTTTTGATGATTGTAGTTTTATTAACG 60 Query 81 ATGATGGTTTCAACATACGCGAGTACGGTAGAAGTGTGTGTTAAGCATTGTGTCCCGAAT 140 ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 61 ATGATTGTTTCAACATACGCGAGTACGGTGGAAGTATGTGTTAAGCATTGTGTCCCGAAT 120 Query 141 CAGTGTATGAAAGTTTCTAAAAAGGCAACTATTCTTTTATGTGAGAATGCTTGCAAAAAA 200 || || |||||||||||| ||||||||||| ||| |||||||||| |||||||| |||| Sbjct 121 CAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACAAAA 180 Query 201 CTCTGCAACCAAGACAAA 218 |||||||| || ||||| Sbjct 181 CTCTGCAATGAAAACAAA 198 > AT5G38378.1 | Symbols: | Plant thionin family protein | chr5:15344448-15344711 FORWARD LENGTH=264 Length=264 Score = 261 bits (141), Expect = 3e-69 Identities = 180/199 (90%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 21 ATGGCGACTCAAACAATGAAAAAGATCTACAGTGTTTTGATGATTGTAGTTTTATTTACG 80 ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCAACTCAAACAATAAAAAAGATATACAGTGTTTTGATGATTGTAGTTTTATTTACG 60 Query 81 ATGATGGTTTCAAC-ATACGCGAGTACGGTAGAAGTGTGTGTTAAGCATTGTGTCCCGAA 139 |||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 61 ATGATGGTTTCAACCA-ACGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGAA 119 Query 140 TCAGTGTATGAAAGTTTCTAAAAAGGCAACTATTCTTTTATGTGAGAATGCTTGCAAAAA 199 || || |||||||||||| | ||||||||| ||| |||||||||| |||||||| ||| Sbjct 120 CCAATGCATGAAAGTTTCTCAGAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACAAA 179 Query 200 ACTCTGCAACCAAGACAAA 218 ||||||||| || ||||| Sbjct 180 ACTCTGCAATGAAAACAAA 198 > AT3G24465.1 | Symbols: | Plant thionin family protein | chr3:8894877-8895140 REVERSE LENGTH=264 Length=264 Score = 244 bits (132), Expect = 3e-64 Identities = 176/198 (89%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 21 ATGGCGACTCAAACAATGAAAAAGATCTACAGTGTTTTGATGATTGTAGTTTTATTTACG 80 ||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCAACTCAAACAACAAAAAAGATATACAGTGTTTTGATGATTGTAGTTTTATTTACG 60 Query 81 ATGATGGTTTCAACATACGCGAGTACGGTAGAAGTGTGTGTTAAGCATTGTGTCCCGAAT 140 ||||| ||||||||||||||||||||| | |||||||||||||| || ||| |||||||| Sbjct 61 ATGATTGTTTCAACATACGCGAGTACGATGGAAGTGTGTGTTAAACACTGTATCCCGAAT 120 Query 141 CAGTGTATGAAAGTTTCTAAAAAGGCAACTATTCTTTTATGTGAGAATGCTTGCAAAAAA 200 || || |||||||||||| ||||||||||| ||| |||||||||| |||||||| |||| Sbjct 121 CAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACAAAA 180 Query 201 CTCTGCAACCAAGACAAA 218 || ||||| || ||||| Sbjct 181 CTTTGCAATGAAAACAAA 198 > AT1G58245.1 | Symbols: | Plant thionin family protein | chr1:21584252-21584524 REVERSE LENGTH=273 Length=273 Score = 235 bits (127), Expect = 2e-61 Identities = 175/199 (88%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 36 ATGAAAAAGATCTACAGTGTTTTGATGATTGTAGTTTTATTTACGATGATGGTTTCAACA 95 ||||||||||| | ||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 ATGAAAAAGATATGCAGAGTTTTGATGATAGTAGTTTTATTTACGATGATGGTTTCAACA 60 Query 96 TACGCGAGTACGGTAGAAGTGTGTGTTAAGCATTGTGTCCCGAATCAGTGTATGAAAGTT 155 || |||||||| | |||||||||||||| ||||||||||| ||||| || ||||||||| Sbjct 61 TATGCGAGTACACTGGAAGTGTGTGTTAAACATTGTGTCCCAAATCAATGCATGAAAGTT 120 Query 156 TCTAAAAAGGCAACTATTCTTTTATGTGAGAATGCTTGCAAAAAACTCTGCAACCAAGAC 215 ||| ||||||||||| | | ||| ||||| ||||| ||||||||||||||||| || || Sbjct 121 TCTGAAAAGGCAACTCTACCTTTGTGTGAAAATGCATGCAAAAAACTCTGCAATGAAAAC 180 Query 216 AAATTTGCTCATGAGAAAT 234 || ||| |||||||||||| Sbjct 181 AAGTTTTCTCATGAGAAAT 199 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14678182708 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5