BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg933391

Length=460
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G29170.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfam...   126    2e-28


> AT2G29170.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily 
protein | chr2:12541864-12542282 REVERSE LENGTH=326
Length=326

 Score =  126 bits (68),  Expect = 2e-28
 Identities = 78/83 (94%), Gaps = 0/83 (0%)
 Strand=Plus/Plus

Query  253  CAGAAGAAAATTTGAGAGACAATTCTAGATGGAGCCTTGGAGGCATGACCGCTCTCGTAA  312
            |||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||| |
Sbjct  13   CAGAAGAAAACTTGAGAGACAAATGTAGATGGAGCCTTGGAGGCATGACCGCTCTCGTTA  72

Query  313  CCGGTGGCTCGAAAGGCCTCGGG  335
            |||||||||| ||||||||||||
Sbjct  73   CCGGTGGCTCCAAAGGCCTCGGG  95



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 21916738564


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5