BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933437
Length=1309
Score E
Sequences producing significant alignments: (Bits) Value
AT2G29830.1 | Symbols: | Galactose oxidase/kelch repeat superf... 1062 0.0
AT2G29820.1 | Symbols: | Galactose oxidase/kelch repeat superf... 979 0.0
AT2G29610.1 | Symbols: | pseudogene of the F-box protein famil... 436 2e-121
AT2G29800.1 | Symbols: | Galactose oxidase/kelch repeat superf... 196 4e-49
> AT2G29830.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12730411-12731599 REVERSE LENGTH=1189
Length=1189
Score = 1062 bits (575), Expect = 0.0
Identities = 953/1128 (84%), Gaps = 55/1128 (5%)
Strand=Plus/Plus
Query 177 AACGACAATCCTCAAGAAGTACTAGAAGAGAATCTTCCGATTCCTCAAGAACTCCCA-AT 235
||||| ||||||||||||| | || ||||||||||||||||| || | |||| ||| |
Sbjct 86 AACGAGAATCCTCAAGAAG-A--AGTAGAGAATCTTCCGATTCTTCTACAACTTCCAGA- 141
Query 236 AGATA-TCATCGTGAGCATCGTCGCTCTTATCCCAAGATGTCATTACCCGTCGCTATCTC 294
||| | |||||| ||||||||||| || |||||||||||||||||||| |||||||| |
Sbjct 142 AGA-ACTCATCGCAAGCATCGTCGCACTCATCCCAAGATGTCATTACCCATCGCTATCCC 200
Query 295 TCGTCTCCAGAGCCTTTCGTCAAGTAATCACTTCGCATGAACTCTACCTAACGCGCTCGA 354
|||||||||||||||||||||| ||||||||||||| || |||||| || | |||||||
Sbjct 201 TCGTCTCCAGAGCCTTTCGTCACTTAATCACTTCGCAGGAGCTCTACGTAGCACGCTCGA 260
Query 355 ACCTCGGCTTCACCGAACCGGTTCTTTATGCGTTCATCGGATTCCCACCGTATATTC-CT 413
||||||||||||||||||||||||||||||| || |||||||||| | |||||| || |
Sbjct 261 ACCTCGGCTTCACCGAACCGGTTCTTTATGCCTTAATCGGATTCCAAGCGTATACTCGC- 319
Query 414 CCAAGCTGGTTCTTTCTTCGTCGGAGCAACTTAGGATTCCCTTTACAATTACGCATAATC 473
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||
Sbjct 320 CCAAGCTGGTTCTTTCTTCGTCGGAGCAAC------TTCCCATTACAATTACACAGAATC 373
Query 474 CGTTCACTTCCTCCAATGTT-TCCTGCAGCTGCTGTGGTCACCATCGGA-TACAAGATCT 531
|||||||||||||||||||| | ||| || ||||||||||| || || |||||||| |
Sbjct 374 CGTTCACTTCCTCCAATGTTAT-CTGGTGCAGCTGTGGTCACAAT-AGACTACAAGATGT 431
Query 532 ACT-TAATGGGTGGTTATAATTCCCTCGTCGAAT-ATCGAC-CCGT-ATCGACTGTGGTT 587
| | |||||||||||| | | | | | ||| ||| | | | ||||| ||| ||
Sbjct 432 A-TGTAATGGGTGGTT-GCA-T-CGGC-TATAATCATC--CTGCATCATCGAATGTAATT 484
Query 588 GTCATCGATTGCAGATTCCATACGTGG-GGCTATCTCCAGAATATGCGAAGGGCTCGTTA 646
|||||||| |||||||||||||| ||| | ||||||| | ||||| |||||||||||
Sbjct 485 GTCATCGACTGCAGATTCCATACTTGGAAG-TATCTCCCGGATATGAAAAGGGCTCGTTG 543
Query 647 CCATGCAG-CAGCCGGAGTATTTGACGGAAACATTTACGTAATCGGAGGCTGCAAGAAA- 704
|| ||||| || ||||| || ||||||||| ||||| || ||||||||||||||||||
Sbjct 544 CCGTGCAGCCA-CCGGAATAATTGACGGAAGGATTTATGTGATCGGAGGCTGCAAGAAAC 602
Query 705 AGAGATGATGATTGGGTCGAAGTGTTCAATGTGACGACTGAGACTTGGGCAACTGTGCCT 764
| ||||| ||||||||| |||||||| ||||||||||| ||| ||||| ||||||||||
Sbjct 603 A-AGATGCTGATTGGGTTGAAGTGTTTGATGTGACGACTCAGAGTTGGGAAACTGTGCCT 661
Query 765 AGTC-AATGCCCTGAA-GATGCTAGTGAGAATGGAGAGTTTATTACATATGTGGTGATGC 822
|| | |||||||| || ||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 662 AG-CGAATGCCCT-AACGATGCTAATGAGAATGGAGAGTTTATTACGTATGTGGTGATGC 719
Query 823 AGGGGAGGATTTTCACTTTGGAGCTTGGGGGTTGTTTGGCTTACGAACCAGTACAAGGTT 882
|||||||| |||||| |||||| |||| | ||||||| |||||||||||||||||||||
Sbjct 720 AGGGGAGGCTTTTCATTTTGGATCTTGAGTGTTGTTTTTCTTACGAACCAGTACAAGGTT 779
Query 883 TATGGCAGTCATGGGGAGT-AT-TAAGTGAGTTGATGAGATTTTGGCACCCGTCGTCGTC 940
||||| |||||| |||| | || ||||||||||||||||||||||||| ||||||||||
Sbjct 780 TATGGGAGTCAT-GGGA-TGATGGAAGTGAGTTGATGAGATTTTGGCACTCGTCGTCGTC 837
Query 941 TTGTGTGGTTGGAGATTTGTTGTATGCACTTGATCTTACGTGTTCTCGTGGACATCCGAT 1000
||||||||||||||||||||||||||||||||||||||||||| ||| || |||||| ||
Sbjct 838 TTGTGTGGTTGGAGATTTGTTGTATGCACTTGATCTTACGTGTGCTCTTGAACATCCAAT 897
Query 1001 AGTGGTATATTATCCGAATGAATTGGTTTGGAGACCTGTGCA-GGGTGTATATTCTTATA 1059
|||||||||||||||||||||||||||||||||||||||| | ||||||| || || |
Sbjct 898 AGTGGTATATTATCCGAATGAATTGGTTTGGAGACCTGTG-ATGGGTGTAGATACTGCTC 956
Query 1060 ATTTGCCTATTCTCAGTTA-TAATTGGTCTAAGATGGCGAATTTTGGTGGGAAGTTGGTG 1118
||||||||||||||| | | || | ||||| | |||||||||||| |||||||||||||
Sbjct 957 ATTTGCCTATTCTCACTGAATA-TACGTCTACGTTGGCGAATTTTGATGGGAAGTTGGTG 1015
Query 1119 ATTTTGAGTGGTGGCTATTCTT-TGTGG-TT-TAAAGATATTTGGTGCATAGAGATTGCG 1175
|||||| | || ||| | | || || | || | || ||||||||| |||||||||||
Sbjct 1016 ATTTTGGGCGGGGGCGACTGTTCTGAGTCTTCTTCCGAAATTTGGTGCGTAGAGATTGCG 1075
Query 1176 TTGGAAATACGTCAAGGAAATCAGATTTGGGGGGAGGTTGAATCAATCTCGCTTGTGTTT 1235
||||||| |||||||||| ||||||||||||||| |||| ||||| ||||| ||||||
Sbjct 1076 TTGGAAACACGTCAAGGAGATCAGATTTGGGGGGTGGTTAAATCAGTCTCGATTGTGTCA 1135
Query 1236 AGAGACGTGATGATG-GCGCCT-TCCATTGAGCTTTGTCGAACTGTTA 1281
|| ||| || |||| | || | || ||||||||||||||||||||||
Sbjct 1136 AGGGACTTGCCGATGAG-GCATGTC-ATTGAGCTTTGTCGAACTGTTA 1181
Score = 58.4 bits (31), Expect = 2e-07
Identities = 31/31 (100%), Gaps = 0/31 (0%)
Strand=Plus/Plus
Query 90 GAAGATAATCAAAACGAGAATCCTCAAGAAG 120
|||||||||||||||||||||||||||||||
Sbjct 74 GAAGATAATCAAAACGAGAATCCTCAAGAAG 104
> AT2G29820.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12728362-12729528 REVERSE LENGTH=1167
Length=1167
Score = 979 bits (530), Expect = 0.0
Identities = 963/1161 (83%), Gaps = 73/1161 (6%)
Strand=Plus/Plus
Query 152 TCCTCAAGAAGAAGAAGA-GATACATAACGACAATCCTCAAGAAGTACTAGAAGAGAATC 210
||||||||||| |||||| || || ||||| ||||||||||||| | || ||||||||
Sbjct 57 TCCTCAAGAAGGAGAAGATAAT-CAAAACGAGAATCCTCAAGAAG-A--AGTAGAGAATC 112
Query 211 TTCCGATTCCTCAAGAACTCCCA-ATAGATA-TCATCGTGAGCA-TCGTCGCTCTTATCC 267
||| || || || |||||| ||| | ||| | |||||| || | || |||| | ||||
Sbjct 113 TTCGGAATCTTCTAGAACTTCCAGA-AGA-ACTCATCGAAAG-ACTCATCGCACACATCC 169
Query 268 CAAGATGTCATTACCCGTCGCTATCTCTCGTCTCCAGAGCCTTTCGTCAAGTAATCACTT 327
|||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 170 CAAGATGTTATTACCCGTATATATCTCTCGTCTCCAGAGACTTTCGTCAAGTAATCACTT 229
Query 328 CGCATGAACTCTACCTAACGCGCTCGAACCTCGGCTTCACCGAACCGGTTCTTTATGCGT 387
|| || |||| | || |||||||||| ||||||||||| |||||||||||||||||| |
Sbjct 230 CGGATAAACTATTCCGAACGCGCTCGCTCCTCGGCTTCAACGAACCGGTTCTTTATGCCT 289
Query 388 TCATCGGATTCCCACCGTATATTCCTCC-AAGCTGGTTCTTTCTTCGTCGGAGCAACTTA 446
| |||||| | ||| | | | ||| || ||||||||||||||||||| ||||||||
Sbjct 290 TAATCGGA-T-CCA-CACAGACTCC-CCTAAGCTGGTTCTTTCTTCGTTGGAGCAAC--- 342
Query 447 GGATTCCCTTTACAATTACGCATAATCCGTTCACTTCCTCCAATGTTTCCTGCAGCTGCT 506
||||| ||| |||||| || |||||||||||||||| || |||| | || ||| |||
Sbjct 343 ---TTCCCATTAGAATTACACAGAATCCGTTCACTTCCTACAGTGTTACTTGGAGCAGCT 399
Query 507 GTGGTCACCATCGGATACAAGATCTACT-TAATGGGTGGTTATAATTCCCTCGTCGAAT- 564
|||||||| |||||||||||||| || | ||||||| || || | | | | | ||||
Sbjct 400 GTGGTCACAATCGGATACAAGATGTA-TGTAATGGGAGG-TACCA-T-CGGC-TTGAATC 454
Query 565 ATCGACCCGTATCGACTGTGGTTGTCATCGATTGCAGATTCCATACGTGGGGCTATCTCC 624
||| | |||||||||||| |||||||||| |||||| |||||||||| ||||||||
Sbjct 455 ATC-A--TGTATCGACTGTGATTGTCATCGACTGCAGAAACCATACGTGGAACTATCTCC 511
Query 625 AGAATATGCGAAGGGCTCGTTACCATGCAGCAGCCGGAGTATTTGACGGAAACATTTACG 684
| ||||| |||||||||||||| |||||| ||||||| | ||| ||||| ||||| |
Sbjct 512 CGGATATGAAAAGGGCTCGTTACCGTGCAGCCGCCGGAGAAATTGGCGGAAGGATTTATG 571
Query 685 TAATCGGAGG-CTGCAAGAAA-AGAGATGATGATTGGGTCGAAGTGTTCAATGTGACGAC 742
| |||||||| | |||||||| | ||||| ||||||||| ||||||||||||| ||||||
Sbjct 572 TGATCGGAGGAC-GCAAGAAACA-AGATGCTGATTGGGTTGAAGTGTTCAATGCGACGAC 629
Query 743 TGAGACTTGGGCAACTGTGCCTAGTCAATGCCCTGAA-GATGCTAGTGAGAATGGAG-AG 800
||||| ||||| ||||||| ||||| ||||||| || |||||||||| |||||||| |
Sbjct 630 TGAGAGTTGGGAAACTGTGTCTAGTGTATGCCCT-AACGATGCTAGTGCGAATGGAGTA- 687
Query 801 TTTAT-TACATATGTGGTGATGCAGGGGAGGATTTTCACTTTGGAGC-TTGGGGGTTGTT 858
||| | ||||||||||||||||||||||||||||||| ||||||| | || |||||||||
Sbjct 688 TTT-TCTACATATGTGGTGATGCAGGGGAGGATTTTCGCTTTGGATCGTT-GGGGTTGTT 745
Query 859 TGGCTTACGAACCAGTACAAGGTTTATGGCAGTCATGGGGAGTAT-TAAGTGAGTTGATG 917
| |||||| ||||||||||||||||||||||||||||||| || | ||||||||||| |
Sbjct 746 TTGCTTACAAACCAGTACAAGGTTTATGGCAGTCATGGGGTGT-TGCAAGTGAGTTGACG 804
Query 918 AGATTTTGGCACCCGTCGTCGTC--TT-GTGTGGTTGGAGATTTGTTGTATGCACTTGAT 974
|||||||||||||||| |||||| || |||| ||||||| ||||||||| || |||||
Sbjct 805 AGATTTTGGCACCCGTTGTCGTCGTTTACTGTGATTGGAGAGTTGTTGTATACAGTTGAT 864
Query 975 CTTACGTGTTCTCGTGGACATCCGATAGTGGTATATTATCCGAATGAATTGGTTTGGAGA 1034
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 865 CTTACGTGTTCTCTTGGACATCCGATAGTGGTATATTATCCGAATGAATCGGTTTGGAGA 924
Query 1035 CCTGTGCAGGGTGTATATTCTTATAATTTGCCTATTCTCAGTTA-TAATTGGTCTAAGAT 1093
|||||| | || || | ||| || || ||||||||||||| | | |||||| |||||
Sbjct 925 CCTGTG-ATGG-GT-T-TTC--AT--TT-GCCTATTCTCAGTCAATG-TTGGTCCAAGAT 974
Query 1094 GGCGAATTTTGGTGGGAAGTTGGTGATTTTGAGTGGTGGCTATTCTTTGTG--GTTTAAA 1151
||||||||||||||||||||||||||||| || || | ||| | | ||||||
Sbjct 975 AGCGAATTTTGGTGGGAAGTTGGTGATTTTC--TGCAC-CTGT-CTTGG-GACGTTTAA- 1028
Query 1152 G-ATATTTGGTGCATAGAGATTGCGTTGGAAATACGTCAAGGAAATCAGATTTGGGGGGA 1210
| |||||| |||||||| ||||||||||||| |||||||||| ||| ||||||||||
Sbjct 1029 GCATATTTTGTGCATAGTGATTGCGTTGGAAGCACGTCAAGGAGGTCATATTTGGGGGGT 1088
Query 1211 GGTTGAATCAATCTCGCTTGTGTTTAGAGACG-TGATGATGGCGCCTTCCATT-GAGCTT 1268
||||||||||| ||||| |||||||| |||| | |||||| ||||| |||| | ||||
Sbjct 1089 GGTTGAATCAAACTCGCGCGTGTTTAGGGACGAT-ATGATGTTGCCTTACATTCG-GCTT 1146
Query 1269 TGTCGAACTGTTACTTTTTGA 1289
|||| ||||||||||||||||
Sbjct 1147 TGTCAAACTGTTACTTTTTGA 1167
Score = 62.1 bits (33), Expect = 1e-08
Identities = 58/69 (84%), Gaps = 6/69 (9%)
Strand=Plus/Plus
Query 58 CTAATGGCGGCGATCCAACCAAGAAT-CT---GCA--AGAAGATAATCAAAACGAGAATC 111
|||| |||| |||||||| ||| ||| || | | |||||||||||||||||||||||
Sbjct 32 CTAACGGCGACGATCCAAACAATAATCCTCAAGAAGGAGAAGATAATCAAAACGAGAATC 91
Query 112 CTCAAGAAG 120
|||||||||
Sbjct 92 CTCAAGAAG 100
> AT2G29610.1 | Symbols: | pseudogene of the F-box protein family,
contains Pfam profile PF00646: F-box domain | chr2:12661312-12662417
FORWARD LENGTH=1106
Length=1106
Score = 436 bits (236), Expect = 2e-121
Identities = 376/441 (85%), Gaps = 19/441 (4%)
Strand=Plus/Plus
Query 862 CTTACGAACCAGTACAAGGTTTATGGCAGTCAT-GGG-GAGTATTAAGTGAGTTGATGAG 919
|||||||||||||||||||||||||| |||||| ||| ||| | |||||||||||||||
Sbjct 567 CTTACGAACCAGTACAAGGTTTATGGGAGTCATGGGGTGAGGA--AAGTGAGTTGATGAG 624
Query 920 ATTTTGGCAC-CCGTCGTCGTCTTGTGTGGTTGGAGATTTGTTGTATGCACTTGATCTTA 978
|||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 625 ATTTTGGCACTCGGT-GTCGTCTTGTGTGGTTGGAGATTTGTTGTATGCACTTGATCTTA 683
Query 979 CGTGTTCTCGTGGACATCCGATAGTGGTATATTATCCGAATGAATTGGTTTGGAGACCTG 1038
||||| ||| || |||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 684 CGTGTGCTCTTGAACATCCAATAGTGGTATATTATCCGAATGAATTCGTTTGGAGACCTG 743
Query 1039 TGCA-GGGTGTATATTCTTATAATTTGCCTATTCTCAGTTA-TAATTGGTCTAAGATGGC 1096
|| | ||||||| || || | |||||||||||||| || | || | |||||| | ||||
Sbjct 744 TG-ATGGGTGTAGATACTGCTCATTTGCCTATTCTCTGTGAATA-TAGGTCTACGTTGGC 801
Query 1097 GAATTTTGGTGGGAAGTTGGTGATTTTGAGTGGTGGCTATTCTT-TGTGG-TT-TAAAGA 1153
|||||||| ||||||||||||||||||| | || ||| | | || || | || | ||
Sbjct 802 GAATTTTGATGGGAAGTTGGTGATTTTGGGCGGGGGCGACTGTTCTGAGTCTTCTTCCGA 861
Query 1154 TATTTGGTGCATAGAGATTGCGTTGGAAATACGTCAAGGAAATCAGATTTGGGGGGAGGT 1213
||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||
Sbjct 862 AATTTGGTGCGTAGAGATTGCGTTGGAAACACGTCAAGGAGATCAGATTTGGGGGGTGGT 921
Query 1214 TGAATCAATCTCGCTTGTGTTTAGAGACGTGATGATG-GCGCCT-TCCATTGAGCTTTGT 1271
| ||||| ||||| |||||| || ||| || |||| | || | || ||||||||||||
Sbjct 922 TAAATCAGTCTCGATTGTGTCAAGGGACTTGCCGATGAG-GCATGTC-ATTGAGCTTTGT 979
Query 1272 CGAACTGTTACTT-TTTGATG 1291
|||||||||| | |||||||
Sbjct 980 CGAACTGTTA-TGGTTTGATG 999
> AT2G29800.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12722939-12724602 REVERSE LENGTH=1565
Length=1565
Score = 196 bits (106), Expect = 4e-49
Identities = 948/1330 (71%), Gaps = 155/1330 (12%)
Strand=Plus/Plus
Query 34 TCTCTGAAACTTCCGACGACGGATCTAATGGCGGCGATCC-AACCAAGAATCTGCAAGAA 92
|||||||||||||||||||||| ||||| ||||||| ||| |||| |||| | | |||
Sbjct 11 TCTCTGAAACTTCCGACGACGGCTCTAACGGCGGCGTTCCAAACC-AGAAAC--C-CGAA 66
Query 93 GATAATCAAAACGAGAATCCTCAAGAAGTAGATGAGCTA-CATAACGAGAATCCTCCG-A 150
| || | || |||| || ||||||| | | ||| | || |||||||| | ||| |
Sbjct 67 G--AA-CCCCACAAGAACCCACAAGAAGAAAAAGAG-AATCAAAACGAGAA--C-CCGAA 119
Query 151 TTCCTCAAGAAGAAGAAGA-GATACATAACGACAATCCTCAAGAAGTACTAGAAGAGAAT 209
| | ||| |||||||| ||| ||| ||| | |||||||| |||| | |
Sbjct 120 TGAAGC-AGATGAAGAAGACGAT-CAT-----CAAGAC-GAAGAAGTA-GAGAA-TG-TT 168
Query 210 CTTCCGATTCCTC-AAGAACTCCCAATAGATA-TCATCGTGAGCATC-GTCGCTCTTATC 266
| ||||||||||| || || ||||| || || | |||| | || | |||| | ||
Sbjct 169 CCTCCGATTCCTCGAA-AAATCCCACCAG-TACTAATCGAAAACA-CTATCGCACCCCTC 225
Query 267 CCAAGATGTCATTACCCGTCGCTATCTCTCGTCTCCAGA-GCCTTTCGTCAAGTAATCAC 325
| ||||||||||||||| |||||||||| |||| | | |||||||||||||||||| |
Sbjct 226 CGGAGATGTCATTACCCGAAGCTATCTCTCCTCTCTA-ACGCCTTTCGTCAAGTAATCTC 284
Query 326 TTC-GCATGAACTCTACCTAACG--CGCTCGAACCTCGGCTTC-ACCGAACCGGTTCTTT 381
||| | | || |||| || || | |||||| | ||||| || || |||||||||||||
Sbjct 285 TTCAG-AGGATCTCTTCC-AA-GTTCGCTCGCTCATCGGC-TCAACGGAACCGGTTCTTT 340
Query 382 ATGCGTTCAT--CG---GA-TTCCCACCGTAT-ATTCCTCCAAGCTGGTTCTTTCTTCGT 434
|| | || || || | | |||| | | | | ||| |||||| |||| |
Sbjct 341 ATACCTTGATCACGTTCAAGTACCCAACATTTGA-AGAAGGAAGATGGTTCATTCTCCAA 399
Query 435 CGGAGCAACTTAGGATTCC-CTTTACAATT--AC-GCATAATCCGTTCACTTCCTCCAAT 490
||||| ||| | || || ||||| |||| || | ||| | || |||||||| ||
Sbjct 400 CGGAGAAAC--A--ATACCTCTTTAAAATTGAACTGTGTAA--C-ATCTCTTCCTCCCAT 452
Query 491 GTTTCCTGCA-GCTGCTGTGGTCACCATCGGAT-ACAAGATCTACT-TAATGGGTGGTTA 547
||||| || | || ||| ||||| || || | ||||||| || | || ||||||||||
Sbjct 453 GTTTCTTGGATGC-ACTGCCGTCACAATAGG-TCACAAGATTTA-TGTAGTGGGTGGTTA 509
Query 548 TAA-TTCCCTCGT-CGAATATCGACCCGTATCG-ACTGTGGTTGTCATCGATTGCAGATT 604
||| || || | | | |||| | || || | |||||| ||| || ||||| |||||
Sbjct 510 TAACTT-CCGC-TAC-AATA--AAACCATA-AGTACTGTGCTTGAGATAGATTGTAGATT 563
Query 605 CCATACGTG-GGGCTATCTCCAGAATATGCGA-AGGGCTCGTTAC-CATGCAG-CAGCCG 660
| ||||||| | | |||||| ||||||| | |||| ||||| | | |||| | || |
Sbjct 564 CAATACGTGTCGAC-ATCTCCGGAATATG-AAGAGGGATCGTTGCTC-CGCAGTC-GCTG 619
Query 661 GAGT-ATTTGACGGAAACATTTACGTAATCGGAGG-CTGCAAGAAAAGAGATGATGATTG 718
|||| | | ||||||| ||||||||| ||| || | || ||| | || |||||||||
Sbjct 620 GAGTGA-TCGACGGAAGGATTTACGTAGTCGCCGGAC-GCCAGAGACGATTTGATGATTG 677
Query 719 GGTCGAAGTGTTCAATGT-GACGACTGAGACTTGGGCAAC-TGTGCCTAGTCAATGCCCT 776
||||||||||||| |||| || |||||||| |||| ||| ||||||| ||| || | ||
Sbjct 678 GGTCGAAGTGTTCGATGTAGA-GACTGAGAGATGGG-AACTTGTGCCTGGTCCATTCTCT 735
Query 777 GAAGATGCTAGTGAGAATGGAGAGTTTATTACATATGTGGTGATGCAGGGGAGGATTTTC 836
||||||| | |||| |||||||| | ||||||| || | | ||||| |
Sbjct 736 TCCTTTGCTAGTTCTAGTGGAAAGTTTATTGTACATGTGGTTTTGGATAATAAGATTTAC 795
Query 837 ACTT-TGGA-GCTTGGGGGTTGTTTGGCTTACGAACC-AGTACAAGGTTTATGGCAGTCA 893
| || |||| | || |||||| || ||||| || || | | || |||| || |
Sbjct 796 A-TTATGGATG-GTGACTATTGTTTTGCGTACGATCCAAG-GCGACGTAGATGGGAGACT 852
Query 894 TGGGGAGTAT-TAAGTG-AGTTGATGAGATT-TTGGCACCCGTCGTCGTCTTGTGTGGTT 950
|||||| | ||||| | || ||| || |||||| | | ||||||||||||||||
Sbjct 853 TGGGGA-CCTGAAAGTGCA-CAGAGGAG-TTATTGGCA--C-TTGTCGTCTTGTGTGGTT 906
Query 951 GGA-GATTTGTTGTATGC-ACTTGAT-CTTACGTG-TTCTCGTGGA-CATCCGATAGTGG 1005
|| ||||||||||| || | ||| | || | | || | |||| | | |||| || |
Sbjct 907 -GATGATTTGTTGTACGCGA-TTGTTCCTCGGGAGATT-T-TTGGAGC-TTCGATTGTCG 961
Query 1006 TATATTATCCGAA--TGAATTGGTTTGGAGACCTGTGCA-GGGTGTATATTCTTATAATT 1062
| ||| |||| || ||| | | |||||||||||| || |||| | || | | ||
Sbjct 962 TTTATGATCC-AAGGGGAA-TAGCTTGGAGACCTGT-CATGGGT-T-TA-GAGT-T--TT 1012
Query 1063 TGCCTATTCTCAGTTATAATT-G-GTCTAAGATGGCGAATTTTGGTGGGAAGTTGGTGAT 1120
||||| |||| ||| || || | |||||| |||||||||||||||||||||||||||||
Sbjct 1013 GGCCTAATCTC-GTT-TATTTCGAGTCTAAAATGGCGAATTTTGGTGGGAAGTTGGTGAT 1070
Query 1121 TTTGAG-TGGT---GGC-TATTCTTTG-TGGTTT-A-AAGATA--TTTGGTGCATAGAGA 1170
|||| | || | || || | |||| | || | || | | |||||||| | |||
Sbjct 1071 TTTGGGATGTTATCGGAGTAGT-TTTGATTATTACAGAAAAGACGTTTGGTGCGTTGAGG 1129
Query 1171 TTGCGTTGGA-AATACGTCAAGGAAA-TCAGATTTGGGGGGAGGTTGAATCAATCTCGCT 1228
| || ||||| || || | ||| | ||| ||||||||| |||| |||||| |||||||
Sbjct 1130 TGGCTTTGGAGAA-ACATGAAG-ATGGTCAAATTTGGGGGAAGGTCGAATCACTCTCGCT 1187
Query 1229 TGTGTTTAG-AGACG-TGATGATGGCGCCTTCCATTGAGCTTTGTCGAACTGTTACTTTT 1286
|||| | | | | | ||| | |||||| | ||||||||| |||||||||||| ||
Sbjct 1188 TGTGAAT-GCATTCCCT-ATG-T--CGCCTTTCTTTGAGCTTTCTCGAACTGTTACGATT 1242
Query 1287 TGATGATTCG 1296
|||||| |||
Sbjct 1243 TGATGACTCG 1252
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64407299235
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5