BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933511
Length=418
Score E
Sequences producing significant alignments: (Bits) Value
AT2G30150.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 468 2e-131
AT2G30140.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 272 2e-72
> AT2G30150.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr2:12874706-12876122 FORWARD LENGTH=1323
Length=1323
Score = 468 bits (253), Expect = 2e-131
Identities = 304/329 (92%), Gaps = 2/329 (1%)
Strand=Plus/Plus
Query 71 TAACTCGACTTTGGAAGGGATATATTCGGGTGTACAGATGCTTACATTTCCCCTTTTTCG 130
||||||||| ||||||||||||| |||||| |||| | ||||||||||||| ||||| |
Sbjct 996 TAACTCGACATTGGAAGGGATATGTTCGGGAGTACCGTTGCTTACATTTCCTGTTTTTTG 1055
Query 131 GGATCAGTTTCTGAATGCGAAGATGATTGTCGAGGAGCGGAGAGTTGGAATGAGGATCGA 190
|||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||||
Sbjct 1056 GGATCAGTTTCTGAATGCTAAGATGATTGTTGAGGAGTGGAGAGTTGGAATGGGGATCGA 1115
Query 191 GAGCAAGAAGCAGATGGAGTTGTTGATAGTGAGTGATGAGATTAAGGAATTGGTAAAAAG 250
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1116 GAGGAAGAAGCAGATGGAGTTGTTGATAGTGAGTGATGAGATCAAGGAATTGGTAAAAAG 1175
Query 251 GTTTATGGATGGAGAGAGTGAAGAAGGGAAAGAGATGAGAAGAAGAACTTGTGATCTCAG 310
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1176 GTTTATGGATGGAGAGAGTGAAGAAGGGAAAGAGATGAGAAGAAGGACTTGTGATCTCAG 1235
Query 311 TGGGATATGTCGAGGAGCGGTTGCGGAAACC-GGTTCTTCTGATGCTAACATCGACGCTT 369
|| ||||||||| |||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct 1236 TGAGATATGTCGTGGAGCGGTTGCG-AAAGGTGGTTCTTCTGATGCTAACATCGATGCTT 1294
Query 370 TCCTTAAAGATATTACCAAGATCGTCTGA 398
|| ||||||||||||| |||||||| |||
Sbjct 1295 TCATTAAAGATATTACTAAGATCGTGTGA 1323
> AT2G30140.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr2:12872134-12873820 FORWARD LENGTH=1563
Length=1563
Score = 272 bits (147), Expect = 2e-72
Identities = 252/301 (84%), Gaps = 14/301 (5%)
Strand=Plus/Plus
Query 71 TAACTCGACTTTGGAAGGGATATATTCGGGTGTA-CAGATGCTTA-CATTTCCCCTT-TT 127
||||||||| ||||||||||||||||| || ||| || |||| || | ||| || || ||
Sbjct 1107 TAACTCGACATTGGAAGGGATATATTCAGGAGTACCA-ATGC-TAGCGTTT-CCGTTGTT 1163
Query 128 TCGGGATCAGTTTCTGAATGCGAAGATGATTGTCGAGGAGC-GGAGAGTTGGAATGAGGA 186
| |||||||| ||||||| || ||||||||||| ||||| | ||||||| ||||||||||
Sbjct 1164 TTGGGATCAGATTCTGAACGCTAAGATGATTGTTGAGGA-CTGGAGAGTCGGAATGAGGA 1222
Query 187 TCGAGAGCAAGAAGCAG-ATGGAGTTGTTGATAGTGAGTGATGAGATTAAGGAATTGGTA 245
||||||| | ||| || || ||||||||||||| ||| || ||||| |||||| | ||
Sbjct 1223 TCGAGAGGACGAAAAAGAAT-GAGTTGTTGATAGGGAGAGAGGAGATCAAGGAAGTAGTG 1281
Query 246 AAAAGGTTTATGGATGGAGAGAGTGAAGAAGGGAAAGAGATGAGAAGAAGAACTTGTGAT 305
|| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 1282 AAGAGGTTTATGGATAGAGAGAGTGAAGAAGGGAAAGAGATGAGAAGAAGGGCTTGTGAC 1341
Query 306 CTCAGTGGGAT-ATGTCGAGGAGCGGTTGCGGAAACCGGTTCTTCTGATGCTAA-CATCG 363
|| |||| || | |||||||||| |||||| ||| |||||| ||| ||| ||| |||||
Sbjct 1342 CTTAGTGAAATCA-GTCGAGGAGCTGTTGCGAAAAGCGGTTCGTCTAATG-TAAACATCG 1399
Query 364 A 364
|
Sbjct 1400 A 1400
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 19805493106
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5