BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg933547 Length=2437 Score E Sequences producing significant alignments: (Bits) Value AT2G30470.1 | Symbols: HSI2, VAL1 | high-level expression of su... 3775 0.0 > AT2G30470.1 | Symbols: HSI2, VAL1 | high-level expression of sugar-inducible gene 2 | chr2:12980507-12985043 REVERSE LENGTH=3089 Length=3089 Score = 3775 bits (2044), Expect = 0.0 Identities = 2304/2426 (95%), Gaps = 32/2426 (1%) Strand=Plus/Plus Query 11 TGG-GTTTGTGATGTTTGAAGTCAAAATGGTGTCAAAGATGTGCATGAACGCTTCATGTG 69 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 309 TGGAGTTTGTGATGTTTGAAGTCAAAATGGGGTCAAAGATGTGCATGAACGCTTCATGTG 368 Query 70 GTACGACTTCTACTGTTGAATGGAAGAAAGGTTGGCCTCTTCGATCTGGTCTTCTCGCTG 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 369 GTACGACTTCTACTGTTGAATGGAAGAAAGGTTGGCCTCTTCGATCTGGTCTTCTCGCTG 428 Query 130 ATCTCTGTTATCGTTGCGGATCTGCGTATGAGAGTTCTCTTTTCTGTGAACAATTCCATA 189 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 429 ATCTCTGTTATCGTTGCGGATCTGCGTATGAGAGTTCTCTATTCTGTGAACAATTTCATA 488 Query 190 AGGACCAATCTGGTTGGAGGGAATGCTATTTGTGTAACAAGAGACTACATTGCGGATGCA 249 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 489 AGGACCAATCTGGTTGGAGGGAATGCTATTTGTGTAGCAAGAGACTACATTGTGGATGCA 548 Query 250 TTGCTTCTAAGGTAACGATTGAGCTT-ATGGACTATGGTGGTGTTGGTTGTAGTACTTGT 308 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| Sbjct 549 TTGCTTCTAAGGTAACGATTGAG-TTAATGGACTATGGTGGTGTTGGTTGTAGTACATGT 607 Query 309 ACTTGCTGCCATCAACTCAATTTGAACACGAGGGGTGAGAATCCAGGTGTTTTTAGCAGA 368 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 608 GCTTGCTGCCATCAACTCAATTTGAACACAAGGGGTGAGAATCCAGGTGTTTTTAGCAGA 667 Query 369 TTGCCAATG-AAACTGTTAGCTGATAGACAACATGTAAATGGCGAAAGCGGAATGAATAT 427 ||||||||| |||| |||||||||||| |||||||||||| | || ||| | Sbjct 668 TTGCCAATGAAAAC-GTTAGCTGATAGGCAACATGTAAAT---G---GC-----GAA-A- 713 Query 428 TGACGGAGGAAGAAACGAAGCCGGTCTCTTTTCTCAGCCACTAGTCATGGGCGGCGATAA 487 | ||||||||||||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct 714 -G-CGGAGGAAGAAACGAAGGCGATCTCTTTTCTCAGCCACTAGTCATGGGCGGAGATAA 771 Query 488 AAGGGAAGAGTTCATGCCTCACCGCGGGCTTGGTCAGCTAATGAATTCAGAAAACACCAC 547 |||||||||||||||||||||||| ||| ||||| ||||||||| | |||||| || || Sbjct 772 AAGGGAAGAGTTCATGCCTCACCGTGGGTTTGGTAAGCTAATGAGTCCAGAAAGTACAAC 831 Query 548 CACCGGGTATAGGCTGGATGCTGCTGGGGAAATACATGAATCATCACCTTCACAGCCATC 607 ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct 832 CACCGGGCATAGGCTGGATGCTGCTGGGGAAATGCATGAATCATCACCTTTACAGCCATC 891 Query 608 TTTGAATATGGGTTTGGCTGTAAATCCTTTTAGCCCATCTTTTGCAACCGAGGGTGTCGA 667 ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| Sbjct 892 TTTAAATATGGGTTTGGCTGTGAATCCGTTTAGCCCATCTTTTGCAACCGAGGCTGTCGA 951 Query 668 GGGAAAGAAACACATCAGTGCTTCTCAGTCCAACATGGTCCATTGCTCTGCCTCTAATAT 727 ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 952 GGGAATGAAACACATCAGTCCTTCTCAGTCCAACATGGTCCATTGCTCTGCTTCTAATAT 1011 Query 728 ACTGCAAAAGCCATCAAAACCTGCTATTTCAACTCCTCCTGTGGCTAGTAAATCCGCTCA 787 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1012 ACTGCAAAAGCCATCAAGACCTGCTATTTCAACTCCTCCTGTGGCTAGTAAATCCGCTCA 1071 Query 788 GGCGCGGATTGGAAGGCCTCCTGTCGAAGGGCGAGGGAAAGGCCACTTACTTCCGCGGTA 847 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct 1072 GGCGCGGATTGGAAGGCCTCCTGTCGAAGGGCGAGGGAGAGGCCACTTGCTTCCGCGGTA 1131 Query 848 TTGGCCAAAATATACGGATAAAGAGGTTCAGCAGATCTCTGGAAATTTGAATCTGAACAT 907 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1132 TTGGCCAAAATATACGGATAAAGAGGTTCAGCAGATCTCTGGAAATTTGAATTTGAACAT 1191 Query 908 TGTACCTCTCTTTGAGAAAACTCTTAGTGCCAGTGATGCTGGTCGCATTGGTCGTCTAGT 967 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1192 TGTACCTCTCTTTGAGAAAACTCTTAGTGCCAGTGATGCTGGTCGCATTGGTCGTCTAGT 1251 Query 968 TCTTCCAAAAGCCTGTGCAGAGGCATATTTTCCTCCGATTAGTCAATCGGAGGGCATTCC 1027 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1252 TCTTCCAAAAGCCTGTGCAGAGGCATATTTTCCTCCGATTAGTCAATCCGAAGGCATTCC 1311 Query 1028 TCTGAAAATCCAAGATGTGAGGGGTAAGGAGTGGACGTTCCAGTTCAGATATTGGCCCAA 1087 | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1312 TTTGAAAATCCAAGATGTGAGGGGTAGGGAGTGGACGTTCCAGTTCAGATATTGGCCCAA 1371 Query 1088 TAACAACAGTAGAATGTATGTTTTAGAAGGTGTCACTCCATGCATACAGTCCATGATGCT 1147 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1372 TAACAATAGTAGAATGTATGTTTTAGAAGGTGTCACTCCATGCATACAGTCCATGATGCT 1431 Query 1148 ACAGGCTGGTGATACAGTAACTTTCAGTCGGGTTGATCCTGGTGGAAAACTAATCATGGG 1207 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1432 ACAGGCTGGTGATACAGTAACTTTCAGTCGGGTTGATCCTGGCGGAAAACTAATCATGGG 1491 Query 1208 TTCTAGAAAGGCAGCTAATGCTGGAGACATGCAGGGTTGTGGTCTCACCAATGGAACTTC 1267 ||| || ||||||||||||||||||||||||||||||||||| |||||||| ||||| || Sbjct 1492 TTCCAGGAAGGCAGCTAATGCTGGAGACATGCAGGGTTGTGGGCTCACCAACGGAACATC 1551 Query 1268 AACCGAGGACACATCATCGTCTGGTGTTACAGAAAACCCACCCTCCATAAATGGTTCATC 1327 ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 1552 AACTGAGGACACATCATCGTCTGGTGTAACAGAAAACCCACCCTCCATAAATGGTTCCTC 1611 Query 1328 GTGTCCCTCACTAATACCGCAAGAATTGAACGGTATGCCTGAAAATTTGAGCTCACAGAA 1387 |||| |||||||||||| |||| ||||| ||||||||||| ||||||| || Sbjct 1612 GTGTATTTCACTAATACCGAAAGAGTTGAATGGTATGCCTGAGAATTTGA----AC---- 1663 Query 1388 GAGTGAGACTAACGGGGGCAGGATAGGTGATGATCCTACACGAGTTAAAGAGAAGAAGAG 1447 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1664 -AGTGAGACTAACGGGGGCAGGATAGGTGATGATCCTACACGAGTTAAAGAGAAGAAGAG 1722 Query 1448 AACTCGAACCATTGGGGCAAAAAATAAGAGACTTCTTTTGCATAGTGAAGAATCTATGGA 1507 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1723 AACTCGAACCATTGGTGCAAAAAATAAGAGACTTCTTTTGCATAGTGAAGAATCTATGGA 1782 Query 1508 GCTGAGACTCACCTGGGAAGAAGCTCAGGACTTGCTTCGTCCCTCTCCTAGTGCAAAGCC 1567 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1783 GCTGAGACTCACTTGGGAAGAAGCTCAGGACTTGCTTCGTCCCTCTCCTAGTGTAAAGCC 1842 Query 1568 TACCATCGTCGTCATTGAGGAGAAAGAAATTGAAGAATATGACGAACCTCCTGTCTTTGG 1627 ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1843 TACCATCGTTGTCATTGAGGAGCAAGAAATTGAAGAATATGACGAACCTCCTGTCTTTGG 1902 Query 1628 AAAGAGGACTATAGTCACTACAAGACCTTCAGGTGAACAGGAACGCTGGGCAACTTGCGA 1687 ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 1903 AAAGAGGACTATAGTCACTACAAAACCTTCAGGTGAACAGGAACGATGGGCAACTTGCGA 1962 Query 1688 CGACTGCTCTAAATGGAGAAGGTTACCTGTAGACGCTCTTCTTCCCTTTAAATGGACATG 1747 ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 1963 CGACTGCTCTAAATGGAGAAGGTTACCTGTAGATGCTCTTCTTTCCTTTAAATGGACATG 2022 Query 1748 TATAGACAATGTTTGGGACGTGAGCAGGTGTTCATGTTCTGCACCGGAGGAGAGTCTGAA 1807 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 2023 TATAGACAATGTTTGGGATGTGAGTAGGTGTTCATGTTCTGCACCGGAGGAGAGTCTGAA 2082 Query 1808 GGAACTTGAGAATGTTCTTAAAGTAGGAAGAGAGTACAAGAAGAGAAGAACTGGGGAAAG 1867 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2083 GGAACTTGAGAATGTTCTTAAAGTAGGAAGAGAGCACAAGAAGAGAAGAACTGGGGAAAG 2142 Query 1868 CCAGGCAGCAAAAAGTCAGCAAGAACCGTGTGGTTTGGATGCACTGGCGAGTGCAGCAGT 1927 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2143 CCAGGCAGCAAAAAGTCAGCAAGAACCGTGTGGTTTGGACGCACTGGCGAGTGCAGCAGT 2202 Query 1928 CTTAGGAGACACAATAGGCGAGCCAGAGGTTGCCACCACGACCAGACATCCAAGGCACAG 1987 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 2203 CTTAGGAGACACAATAGGCGAGCCAGAGGTAGCGACCACGACCAGACATCCAAGGCACAG 2262 Query 1988 GGCTGGATGCTCTTGCATCGTGTGCATTCAGCCACCAAGTGGGAAAGGTAGACACAAGCC 2047 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2263 GGCTGGATGCTCTTGCATCGTGTGCATTCAGCCACCAAGTGGGAAAGGTAGGCACAAGCC 2322 Query 2048 TACATGTGGGTGCACTGTGTGTAGCACCGTGAAGAGAAGGTTCAAAACGCTTATGATGAG 2107 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2323 TACATGTGGCTGCACTGTGTGTAGCACCGTGAAGAGAAGGTTCAAGACGCTTATGATGAG 2382 Query 2108 GAGGAAGAAGAAGCAGTTGGAGCGCGATGTAACAGCAGCAGAAGATAAGAAGAAGAAGGA 2167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2383 GAGGAAGAAGAAGCAGTTGGAGCGCGATGTAACAGCAGCAGAAGATAAGAAGAAGAAGGA 2442 Query 2168 CATGGAACTGGCTGAGTCTGATAAGAGTAAGGAGGAGAAGGATGTGAACACAGCGAGGAT 2227 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 2443 CATGGAACTGGCTGAGTCTGATAAGAGTAAGGAGGAGAAGGAAGTGAACACAGCGAGAAT 2502 Query 2228 AGATCTGAACAGTGATCCATACAACAAAGAAGATGCTGAAGCTGTGGCGGTGGAGAAAGA 2287 ||| |||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| Sbjct 2503 AGACCTGAACAGTGATCCATACAATAAAGAAGATGTTGAAGCTGTTGCGGTGGAGAAAGA 2562 Query 2288 AGAGAGTCGAAAAAGAGCAATTGGACAGTGTTCAGGG-GTGGTGACTCAAGGCGCCGGTG 2346 ||||||||||||||||||||| ||||||||||| ||| |||||| |||||| |||| ||| Sbjct 2563 AGAGAGTCGAAAAAGAGCAATAGGACAGTGTTC-GGGCGTGGTGGCTCAAGACGCCAGTG 2621 Query 2347 ATGTATTAGGCGTTACGGAGTTAGAAGGAGAGGCTAAGAAAGTTGGTGAAGAGCCGAGAG 2406 |||| ||||| ||||| |||||||||||||||| |||||| ||| ||||||||||||||| Sbjct 2622 ATGTTTTAGGAGTTACAGAGTTAGAAGGAGAGGGTAAGAATGTTCGTGAAGAGCCGAGAG 2681 Query 2407 TTTCAAGCTAATATGGAAGGAGAAAA 2432 ||||||||| ||||||||||| |||| Sbjct 2682 TTTCAAGCTGATATGGAAGGA-AAAA 2706 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 121033513995 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5