BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933572
Length=830
Score E
Sequences producing significant alignments: (Bits) Value
AT2G30670.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1186 0.0
AT2G29330.1 | Symbols: TRI | tropinone reductase | chr2:1259459... 745 0.0
AT2G29310.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 701 0.0
> AT2G30670.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:13069313-13070904 REVERSE LENGTH=789
Length=789
Score = 1186 bits (642), Expect = 0.0
Identities = 745/794 (94%), Gaps = 10/794 (1%)
Strand=Plus/Plus
Query 21 ATGGATCAAAGATGGAGTCTTCAGGGTATGACTGCTCTTGTAACCGGTGGAGCCAGCGGA 80
|||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1 ATGGATAAAAGATGGAGTCTTCAGGGTATGACCGCTCTTGTAACTGGTGGAGCCAGCGGA 60
Query 81 ATCGGGTATGCCATAGTAGAGGAGCTAGCTGGTCTTGGAGCTAGAATCCATGTATGCGAT 140
|||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 61 ATCGGGCATGCTATAGTAGAGGAGCTAGCCGGTCTTGGAGCTAGAATCTATGTATGCGAT 120
Query 141 ATATCTGAAACACTCCTCAACCAAAGTTTAAGCGAATGGGAAAAGAAACGGTTTCAAGTA 200
|||||||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||||
Sbjct 121 ATATCTGAAACACTGCTCAATCAAAGTTTAAGTGAATGGGAAAAGAAAGGGTTTCAAGTA 180
Query 201 AGTGGTTCAATCTGTGATGTAACCTCTCATTCCGAGAGGGAAACACTTATGCAAAAC-GT 259
||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||| ||
Sbjct 181 AGTGGTTCAATATGTGATGTATCCTCTCATTCCGAGAGGGAAACACTTATGC-AAACAGT 239
Query 260 CTCAACGATGTTTGATGGCAAACTGAACATTCTTGTGAACAACGCTGGCGTAATT-CGCA 318
||||| |||||| |||||||| |||||||||||||||||||| | ||||||| || |
Sbjct 240 CTCAAAGATGTTCGATGGCAAGCTGAACATTCTTGTGAACAATGTTGGCGTAGTTAATC- 298
Query 319 CAAAGCCAACAATAGAATATGTGGCA-CACGATTTCTCGTTCCA-TATTTCAACAAACTT 376
|||||||||||||||||||||||||| | |||||||||||| || |||||||||||||||
Sbjct 299 CAAAGCCAACAATAGAATATGTGGCAGC-CGATTTCTCGTT-CAGTATTTCAACAAACTT 356
Query 377 GGAATCTGCTTATCACCTTAGCCAACTTTCTCATCCTCTCCTAAAAGCTTCGGAATTTGG 436
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 357 GGAATCTGCTTATCACCTTAGCCAACTTTCACATCCTCTCCTAAAAGCTTCAGAATTTGG 416
Query 437 AAGCATCGTCTTTATTTCCTCTGTTGGAGGAGTTGTATCAATGGAGTGTGGATCTATATA 496
||||||| |||| ||||| ||||||||||| ||||| |||||||||||||||||||| ||
Sbjct 417 AAGCATCATCTTCATTTCTTCTGTTGGAGGGGTTGTGTCAATGGAGTGTGGATCTATCTA 476
Query 497 TAGTTTAACGAAAGGAGCTTTGAATCAACTAGCAAAAACTTTGGCATGTGAATGGGCAAG 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 TAGTTTAACGAAAGGAGCTTTGAATCAACTAGCAAAAACTTTGGCATGTGAATGGGCAAG 536
Query 557 AGATGGCATAAGAACCAACTCTGTTGCTCCTAATTTTATCCATACTGCTATGGCTCAACt 616
||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 537 AGATGGCATAAGAGCCAACTCTGTTGCTCCTAATTTTATCTACACTGCTATGGCTCAACC 596
Query 617 ttttttCAAAGACGCCGATTATGAGAAGAGTTTGGTTAGTAGAACTCCACTTGGTCGCGC 676
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 597 TTTTTTCAAAGACGCCGATTACGAGAAGAGTTTGGTTAGTAGAACTCCACTTGGTCGCGC 656
Query 677 TGGAGAGCCAAGA-GAGGTTGCATCACTTGTGGCTTTTCTATGTCTACCTGCTGCTTCAT 735
||||||||||| | |||||| ||||||||||||||||||| ||||||||||| |||||||
Sbjct 657 TGGAGAGCCAA-ATGAGGTTTCATCACTTGTGGCTTTTCTGTGTCTACCTGCAGCTTCAT 715
Query 736 ATATTACTGGTCAGACCATTTGTGTTGATGGAGGTCTCACTGTCAACGGTTTCTCCTATA 795
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 716 ATATTACTGGTCAGACCATTTGTGTTGATGGAGGTCTCACTGTCAATGGTTTCTCCTATA 775
Query 796 AGCCACAGGCCTGA 809
|||||||||| |||
Sbjct 776 AGCCACAGGCTTGA 789
> AT2G29330.1 | Symbols: TRI | tropinone reductase | chr2:12594590-12596330
FORWARD LENGTH=931
Length=931
Score = 745 bits (403), Expect = 0.0
Identities = 675/804 (84%), Gaps = 28/804 (3%)
Strand=Plus/Plus
Query 21 ATGGATCAAAGATGGAGTCTTCAGGGTATGACTGCTCTTGTAACCGGTGGAGCCAGCGGA 80
|||||| |||| |||||||| || ||| ||||||||||||| ||||||||||||||||||
Sbjct 15 ATGGATAAAAGGTGGAGTCTCCAAGGTTTGACTGCTCTTGTGACCGGTGGAGCCAGCGGA 74
Query 81 ATCGGGT-ATGCCATAGTAGAGGAGCTAGCTGGTCTTGGAGCTAGAATCCATGTATGCGA 139
||| ||| |||| |||||||| || || || ||| |||| || | ||||||||| || ||
Sbjct 75 ATC-GGTCATGCTATAGTAGAAGAACTCGCCGGTTTTGGGGCCAAAATCCATGTGTGTGA 133
Query 140 TATATCTG-AAACACTCCTCAACCAAAGTTTAAGCGAATGGGAAAAGAAACGGTTTCAAG 198
||||| | |||| || ||||| ||||||||| ||||||||| |||||| |||||||||
Sbjct 134 CATATC-GAAAACTCTGCTCAATCAAAGTTTATCCGAATGGGAGAAGAAAGGGTTTCAAG 192
Query 199 TAAGTGGTTCAATCTGTGATGTAACCTCTCATTC-CGAGAGGGAAACACTTATGCAAAAC 257
| ||||||||| |||| |||| | || || || ||| || ||||||||||||| ||||
Sbjct 193 TGAGTGGTTCAGTCTGCGATGCATCCAATC-GTCTCGAAAGAGAAACACTTATGC-AAAC 250
Query 258 -GTCTCAACGATGTTTGATGGCAAACTGAACATTCTTGTGAACAACGCTGGCGTAATTCG 316
||| | || || ||||||||||| || ||||||||||||||||| | |||| ||||||
Sbjct 251 TGTCACCACAATATTTGATGGCAAGCTTAACATTCTTGTGAACAATGTTGGCACAATTCG 310
Query 317 CACAAAGCCAACAATAGAATATGTGGCACACGATTTCTCGTTCCATATTTCAACAAACTT 376
||||||||||||||||||||||| |||| | ||||| ||||||| |||||||||||||||
Sbjct 311 CACAAAGCCAACAATAGAATATGAGGCAGAAGATTTTTCGTTCCTTATTTCAACAAACTT 370
Query 377 GGAATCTGCTTATCACCTTAGCCAACTTTCTCATCCTCTCCTAAAAGCTTC-GG-AATTT 434
||||||||||||||| || ||||||||||| ||||| |||||||| ||||| || ||
Sbjct 371 GGAATCTGCTTATCATCTAAGCCAACTTTCACATCCACTCCTAAAGGCTTCAGGCAA--C 428
Query 435 GGAAGCA-T-CGTCTTTATTTCCTCTGTTGGA-GGAGTTGTATCAATGGAGTG-TGGATC 490
|||| | | | | ||||||||||||| || | ||| | |||||| | || || || |||
Sbjct 429 GGAATTATTAC-T-TTTATTTCCTCTGCTGCAGGGA-TCGTATCATTTGA-TGCTGCATC 484
Query 491 TATATATAGTTTAACGAAAGGAGCTTTGAATCAACTAGCA-AAAACTTTGGCATGTGAAT 549
|| ||| || |||||||||||||||||||||| |||||| ||| |||||| |||||||
Sbjct 485 CATTTATGGTCTAACGAAAGGAGCTTTGAATCAGCTAGCACGAAA-TTTGGCGTGTGAAT 543
Query 550 GGGCAAGAGATGGCATAAGAACCAACTCTGTTGCTCCTAATTTTATCCA-TACTGCTATG 608
|||||| ||| ||||| || ||||| | ||||| ||||||||||| || |||||| ||
Sbjct 544 GGGCAAAAGACGGCATTCGAGCCAACGCGGTTGCGCCTAATTTTAT-CACCACTGCTCTG 602
Query 609 GCTCAACtttttttCAAAGACGCCGATTATGAGAAGAG-TTTGGT-TAGTAGAACTCCAC 666
||| ||| |||| || ||||||| | || | | | ||| ||| || |||||||||||||
Sbjct 603 GCTAAACCTTTTCTCGAAGACGCTGGTT-TTA-ACGAGATTTTGTCGAGTAGAACTCCAC 660
Query 667 TTGGTCGCGCTGGAGAGCCAAGAGAGGTTGCATCACTTGTGGCTTTTCTATGTCTACCTG 726
|||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 661 TTGGTCGCGCTGGAGAACCAAGAGAGGTTGCCTCACTTGTGGCTTTTCTGTGTCTACCTG 720
Query 727 CTGCTTCATATATTACTGGTCAGACCATTTGTGTTGATGGAGGTCTCACTGTCAACGGTT 786
|||||||||||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct 721 CTGCTTCATATATTACTGGTCAGACCATTTGTGTTGATGGAGGTCTCACTGTTAATGGCT 780
Query 787 TCTCCTATAAGCCACAGGCCTGAG 810
|||| ||| ||||| |||| ||||
Sbjct 781 TCTCATATCAGCCATAGGCTTGAG 804
> AT2G29310.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:12590059-12591363 FORWARD LENGTH=901
Length=901
Score = 701 bits (379), Expect = 0.0
Identities = 682/826 (83%), Gaps = 29/826 (4%)
Strand=Plus/Plus
Query 18 AAAATGGATCAA-AGATGGAGTCTTCAGGGTATGACTGCTCTTGTAACCGGTGGAGCCAG 76
||||||||| || ||||||||||| || ||||||||||||||||||||||||| ||||||
Sbjct 7 AAAATGGAT-AAGAGATGGAGTCTACAAGGTATGACTGCTCTTGTAACCGGTGCAGCCAG 65
Query 77 CGGAATCGGGTATGCCATAGTAGAGGAGCTAGCTGGTCTTGGAGCTAGAATCCATGTATG 136
||||||||||||||||||||||||||| |||| || ||||||||| ||||||| ||||
Sbjct 66 TGGAATCGGGTATGCCATAGTAGAGGAGTTAGCAAGTTTTGGAGCTATAATCCATATATG 125
Query 137 CGATATATCTGAAACACTCCTCAACCAAAGTTTAAGCGAATGGGAAAAGAAACGGTTTCA 196
|| || |||||||| || |||| ||||||||||| ||||||||||||||| |||||||
Sbjct 126 TGACATCTCTGAAACTCTTCTCAGTCAAAGTTTAAGTGAATGGGAAAAGAAAGGGTTTCA 185
Query 197 AGTAAGTGGTTCAATCTGTGATGTAACCTCTCATTCCGAGAGGGAAACACTTATGCAAAA 256
||| ||||||||||||||||||||| | |||| |||| || |||| ||| |||||||
Sbjct 186 AGTGAGTGGTTCAATCTGTGATGTAGCTTCTCGGCCCGATAGAGAAAAACTGATGCAAAC 245
Query 257 CGTCTCAACGATGTTTGATGGCAAACTGAACATTCTTGTGAACAACGCTGGCGTAATTCG 316
|||||| || |||||||||||||||| ||||||||||| ||||| | ||| ||||| ||
Sbjct 246 CGTCTCCTCGCTGTTTGATGGCAAACTCAACATTCTTGTAAACAATGTTGGTGTAATACG 305
Query 317 CACAAAGCCAACAATAGAATATGTGGCACACGATTTCTCGTT-CCATATTTCAACAAACT 375
||||||||||| ||||||||||||| | |||||||| || ||| || |||||||| |
Sbjct 306 TGGAAAGCCAACAACAGAATATGTGGCAGAGGATTTCTC-TTACCACATCTCAACAAATT 364
Query 376 TGGAATCTGCTTAT-CACCTTAGCCAACTTTCTCATCCTCTCCTAAAAGCTTC-GGAATT 433
||||| | |||| | || ||||||| ||||| |||| ||| |||| ||||| || |||
Sbjct 365 TGGAACCAGCTT-TCCATTTTAGCCAGCTTTCACATCTTCTTTTAAAGGCTTCAGG-ATT 422
Query 434 TGGAAGCATCGTCTTTATTTCCTCTGTTGGAGGAGTTGTATCAATGGAGTGTGGATCTAT 493
|||||||||||||||||| ||||||| | ||| ||||||||| | | |||||||| ||
Sbjct 423 TGGAAGCATCGTCTTTATGTCCTCTGCTACAGGGGTTGTATCAGTTCAATGTGGATCCAT 482
Query 494 ATATAGTTTAACGAAAGGAGCTTTGAATCAACTAGC-AAAAACTTTGGCATGTGAATGGG 552
|||||| |||| |||||||||||||| || || | | ||| ||| |||||||||||||
Sbjct 483 TTATAGTCTAACTAAAGGAGCTTTGAACCAGTTAACTAGAAA-TTTAGCATGTGAATGGG 541
Query 553 CAAGAGATGGCATAAGAACCAACT-CTGTTGCTCCTAATTTTATCCATACTGCTATGGCT 611
||| ||| ||||||||| |||| | ||||||| |||||| || || | ||| || || ||
Sbjct 542 CAAAAGACGGCATAAGAGCCAA-TGCTGTTGCACCTAATGTTGTCAAGACTCCTTTGTCT 600
Query 612 CAACt-ttttttCAAAGACGCCGATTAT-GAGAAGAG-TTTGGTT-AGTAGAACTCCACT 667
||| | || | || | |||| || || | || || | || ||| ||||||||||||||
Sbjct 601 CAA-TCTTATCTCGAGGACGTCGGTT-TCAAGGAG-GCATT-GTTCAGTAGAACTCCACT 656
Query 668 TGGTCGCGCTGGAGAGCC-AA-GAGAGGTTGCATCACTTGTGGCTTTTCTA-TGTCTACC 724
|||||||||||||||||| || || || |||||||||| |||| | |||| ||||||||
Sbjct 657 TGGTCGCGCTGGAGAGCCGAATGA-AG-TTGCATCACTAGTGG-TCTTCTTGTGTCTACC 713
Query 725 TGCTGCTTCATATATTACTGGTCAGACCATTTGTGTTGATGGAGGTCTCACTGTCAACGG 784
|| ||||| |||||||||||||| ||||||||| ||||||| ||| ||||||| || |
Sbjct 714 AGCAGCTTCTTATATTACTGGTCAAACCATTTGTATTGATGGTGGTTTCACTGTTAATGC 773
Query 785 TTTCTCCTATAAGCCACAGGCCTGAGAGATGAGACTTGTGTGTGTT 830
||||| |||||||||||||| ||| | ||| | ||||| ||||||
Sbjct 774 CTTCTCTTATAAGCCACAGGCTTGATA-ATG-GCCTTGT-TGTGTT 816
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 40438488335
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5