BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933581
Length=1136
Score E
Sequences producing significant alignments: (Bits) Value
AT2G30740.1 | Symbols: | Protein kinase superfamily protein | ... 1744 0.0
AT2G30730.1 | Symbols: | Protein kinase superfamily protein | ... 1192 0.0
AT1G06700.1 | Symbols: | Protein kinase superfamily protein | ... 1136 0.0
> AT2G30740.1 | Symbols: | Protein kinase superfamily protein
| chr2:13095976-13098594 FORWARD LENGTH=1498
Length=1498
Score = 1744 bits (944), Expect = 0.0
Identities = 1079/1144 (94%), Gaps = 9/1144 (1%)
Strand=Plus/Plus
Query 1 ATTTG-AAGAAGAGAACAAGGATGCGCAAGTGGATCTGTTGTGGGGAGAAAAGAGGAGAT 59
||||| |||||||||||||||||||| | |||||||||||||||||| |||| |||||||
Sbjct 68 ATTTGAAAGAAGAGAACAAGGATGCGTAGGTGGATCTGTTGTGGGGATAAAAAAGGAGAT 127
Query 60 TCAGATTTATCAAATGAGGAGGTGCATCTGAAAAGTCCATGGCAGCAA-TCTGACGCAAA 118
||||||||||||||||| ||||||||| |||||||||||||||| || ||||| |||||
Sbjct 128 TCAGATTTATCAAATGAAGAGGTGCATTTGAAAAGTCCATGGCA-AAATTCTGAGGCAAA 186
Query 119 TCAAAAGAATCAAAAACCACCAGCTGTTGCAAAACCTGAGGCGCAGAAGGAAGCTCTTCC 178
|||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct 187 TCAAAAGAATCAAAAACCACAAGCTGTTGTAAAGCCTGAGGCGCAGAAAGAAGCTCTTCC 246
Query 179 CATCGAAGTTCCTCCCTTGTCTGTTGACGAGGTTAAAGAAAAGACTGACAATTTTGGATC 238
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 247 CATCGAAGTTCCTCCCTTGTCTGTGGATGAGGTTAAAGAAAAGACTGACAATTTTGGATC 306
Query 239 AAAGTCTCTGATTGGTGAGGGATCTTATGGAAGGGTATATTATGCAACTCTAAATGATGG 298
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 307 TAAGTCTCTGATTGGTGAGGGTTCTTATGGAAGGGTATATTATGCAACTCTAAATGATGG 366
Query 299 GAAAGCAGTGGCTTTGAAGAAACTCGATGTTGCCCCTGAAGCTGAAACAAATTCTGAGTT 358
||||||||| ||||||||||||||||||||||| ||||||||||||||||| | |||||
Sbjct 367 GAAAGCAGTTGCTTTGAAGAAACTCGATGTTGCACCTGAAGCTGAAACAAACACCGAGTT 426
Query 359 CTTGAGTCAGGTTTCCATGGTTTCAAGATTGAAGCATGAGAATCTCATTCAACTGGTTGG 418
| ||| |||||||||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct 427 CCTGAATCAGGTTTCCATGGTTTCAAGACTAAAACATGAGAATCTCATTCAACTGGTTGG 486
Query 419 TTATTGTGTTGATGAAAACCTTCGTGTTCTTGCTTATGAGTTTGCAACAATGGGATCACT 478
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 487 TTATTGTGTTGATGAAAACCTCCGTGTTCTTGCTTATGAGTTTGCAACAATGGGATCACT 546
Query 479 GCACGACATTCTCCATGGTAGGAAGGGAGTTCAAGGTGCACAGCCTGGTCCAACACTTGA 538
|||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 547 GCACGACATTCTACATGGTAGGAAGGGAGTTCAAGGAGCACAGCCAGGTCCAACACTTGA 606
Query 539 CTGGTTAACAAGGGTGAAGATAGCAGTTGAGGCAGCTAGGGGTTTAGAATACCTTCATGA 598
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 607 CTGGTTAACGAGGGTGAAGATAGCTGTTGAGGCAGCTAGGGGTTTAGAATACCTTCATGA 666
Query 599 GAAGGTTCAGCCTCCTGTGATACATAGAGACATAAGATCTAGCAATGTGCTTCTTTTTGA 658
|||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct 667 GAAGGTTCAGCCTCCTGTAATACATAGAGACATAAGATCTAGCAATGTTCTCCTTTTTGA 726
Query 659 AGACTATCAAGCAAAAGTTGCTGATTTCAATCTCTCAAATCAAGCTCCTGATAATGCTGC 718
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 727 AGACTATCAAGCAAAAGTTGCAGATTTTAATCTCTCAAATCAAGCTCCTGATAATGCTGC 786
Query 719 TCGTCTTCACTCTACAAGAGTCTTGGGCACCTTTGGCTATCACGCTCCAGAATATGCTAT 778
||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||
Sbjct 787 TCGTCTTCACTCTACGAGAGTTTTAGGCACCTTTGGCTATCACGCTCCAGAATATGCTAT 846
Query 779 GACCGGACAGTTGACGCAGAAGAGTGACGTGTATAGCTTTGGGGTTGTTCTTCTAGAGCT 838
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 847 GACAGGACAGTTAACGCAGAAGAGTGACGTGTATAGCTTTGGGGTTGTTCTTCTAGAGCT 906
Query 839 TTTGACAGGGAGGAAACCTGTAGATCACACAATGCCACGTGGCCAACAAAGTCTTGTAAC 898
||||||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct 907 TTTGACAGGAAGGAAACCTGTAGATCATACAATGCCACGCGGCCAACAGAGTCTTGTAAC 966
Query 899 CTGGGCTACACCAAGACTCAGTGAAGATAAAGTGAAGCAGTGTGTTGATCCAAAGCTAAA 958
||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 967 TTGGGCTACACCGAGACTCAGTGAAGATAAAGTGAAGCAATGTGTTGATCCAAAGTTAAA 1026
Query 959 AGGAGAATATCCTCCTAAATCAGTAGCTAAGCTAGCAGCGGTGGCAGCATTGTGTGTACA 1018
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct 1027 AGGAGAATATCCTCCTAAATCAGTAGCCAAGCTAGCAGCGGTGGCAGCATTATGTGTGCA 1086
Query 1019 ATACGAATCTGAGTTTAGACCCAACATGAGTATAGTTGTAAAAGCTTTGCAGCCACTTCT 1078
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1087 ATACGAATCTGAGTTTAGACCAAATATGAGTATAGTTGTAAAAGCTTTGCAGCCACTTCT 1146
Query 1079 CAAACCACCAGCACCAGCCCCAG------TACCGGAATCCTGAGTTTGTGCGCCTTTTAA 1132
||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 1147 CAAACCACCAGCACCAGCCCCAGCCCCAGTACCGGAATCCTGAGTTTGTGCACCTTTTAA 1206
Query 1133 ATAC 1136
||||
Sbjct 1207 ATAC 1210
> AT2G30730.1 | Symbols: | Protein kinase superfamily protein
| chr2:13093145-13094677 FORWARD LENGTH=1017
Length=1017
Score = 1192 bits (645), Expect = 0.0
Identities = 866/971 (89%), Gaps = 21/971 (2%)
Strand=Plus/Plus
Query 114 GCAAATCAAAAGAATCAAAAACCACCAGCTGTTGCAAAACCTGAGGCGCAGAAGGAAGCT 173
||||||||||||||||||||||||| || | ||||||| ||| | || | | | |
Sbjct 31 GCAAATCAAAAGAATCAAAAACCACAAGATCTTGCAAAGCCT-A-----AGGA-G-A-TT 81
Query 174 CTTCCCATCGA-AGTTCCTCCCTTGTCTGTTGACGAGGTTAAAGAAAAGACTGACAATTT 232
|||||||| | ||||||| ||||||| || || |||||||| ||| |||||||||||||
Sbjct 82 CTTCCCAT-TATAGTTCCTTCCTTGTCAGTGGATGAGGTTAATGAACAGACTGACAATTT 140
Query 233 TGGATCAAAGTCTCTGATTGGTGAGGGATCTTATGGAAGGGTATATTATGCAACTCTAAA 292
|||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 141 TGGACCAAATTCTCTGATTGGTGAGGGATCTTATGGAAGGGTATACTATGCAACTCTAAA 200
Query 293 TGATGGGAAAGCAGTGGCTTTGAAGAAACTCGATGTTGCCCCTGAAGCTGAAACAAATTC 352
|||||| |||||||| |||||||||||||||||| |||| ||||||| ||||||||| |
Sbjct 201 TGATGGAAAAGCAGTTGCTTTGAAGAAACTCGATCTTGCACCTGAAGATGAAACAAACAC 260
Query 353 TGAGTTCTTGAGTCAGGTTTCCATGGTTTCAAGATTGAAGCATGAGAATCTCATTCAACT 412
||||| || || ||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 261 CGAGTTTTTAAGCCAGGTTTCCATGGTTTCAAGACTAAAGCATGAGAATCTCATTCAACT 320
Query 413 GGTTGGTTATTGTGTTGATGAAAACCTTCGTGTTCTTGCTTATGAGTTTGCAACAATGGG 472
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 321 GGTCGGTTATTGTGTTGATGAAAACCTTCGTGTTCTTGCTTATGAGTTTGCAACAATGGG 380
Query 473 ATCACTGCACGACATTCTCCATGGTAGGAAGGGAGTTCAAGGTGCAC-AGCCTGGTCCAA 531
|||| ||||||| ||||| |||||||||||||||||||||| ||||| | || |||||||
Sbjct 381 ATCATTGCACGATATTCTGCATGGTAGGAAGGGAGTTCAAGATGCACTA-CCAGGTCCAA 439
Query 532 CACTTGACTGGTTAACAAGGGTGAAGATAGCAGTTGAGGCAGCTAGGGGTTTAGAATACC 591
||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 440 CACTTGACTGGATAACAAGGGTGAAGATAGCCGTTGAGGCAGCTAGAGGTTTAGAATACC 499
Query 592 TTCATGAGAAGGTTCAGCCTCCTGTGATACATAGAGACATAAGATCTAGCAATGTGCTTC 651
||||||||||||||||||||| || ||||||||||||||||||||||||||| | ||||
Sbjct 500 TTCATGAGAAGGTTCAGCCTCAAGTAATACATAGAGACATAAGATCTAGCAATATACTTC 559
Query 652 TTTTTGAAGACTATCAAGCAAAAGTTGCTGATTTCAATCTCTCAAATCAAGCTCCTGATA 711
||||||| ||||||||||||||| |||||||||| ||||| ||||||||| |||||||||
Sbjct 560 TTTTTGACGACTATCAAGCAAAAATTGCTGATTTTAATCTTTCAAATCAATCTCCTGATA 619
Query 712 ATGCTGCTCGTCTT-CACTCTACAAGAGTCTTGGGCACCTTTGGCTATCACGCTCCAGAA 770
||||||||||| || || ||||||||||| ||||||| |||||||||| || ||||||||
Sbjct 620 ATGCTGCTCGT-TTACAATCTACAAGAGTTTTGGGCAGCTTTGGCTATTACTCTCCAGAA 678
Query 771 TATGCTATGACCGGACAGTTGACGCAGAAGAGTGACGTGTATAGCTTTGGGGTTGTTCTT 830
||||||||||| ||| ||||||| || |||||||| || ||| | ||||||||||| |||
Sbjct 679 TATGCTATGACTGGAGAGTTGACACATAAGAGTGATGTATATGGTTTTGGGGTTGTACTT 738
Query 831 CTAGAGCTTTTGACAGGGAGGAAACCTGTAGATCACACAATGCCACGTGGCCAACAAAGT 890
|||||||| ||||||||||||||||| || || || |||||||| || ||||||||||||
Sbjct 739 CTAGAGCTCTTGACAGGGAGGAAACCAGTTGACCATACAATGCCGCGAGGCCAACAAAGT 798
Query 891 CTTGTAACCTGGGCTACACC-AAGACTCAGTGAAGATAAAGT-GAAGCAGTGTGTTGATC 948
|||||||| ||||||||||| || ||| |||||||||| ||| || | ||||||||||||
Sbjct 799 CTTGTAACTTGGGCTACACCGAA-ACTTAGTGAAGATACAGTAGAGG-AGTGTGTTGATC 856
Query 949 CAAAGCTAAAAGGAGAATATCCTCCTAAATCAGTAGCTAAGCTAGCAGCGGTGGCAGCAT 1008
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 857 CAAAGCTAAAGGGAGAATATTCTCCTAAATCAGTAGCTAAGCTAGCAGCGGTGGCAGCAT 916
Query 1009 TGTGTGTACAATACGAATCTGAGTT-TAGACCCAACATGAGTATAGTTGTAAAAGCTTTG 1067
||||||| ||||| |||||| | || |||||| || ||||||| |||||| |||||||||
Sbjct 917 TGTGTGTGCAATATGAATCTAA-TTGTAGACCAAAAATGAGTACAGTTGTGAAAGCTTTG 975
Query 1068 CAGCCACTTCT 1078
|| | ||||||
Sbjct 976 CAACAACTTCT 986
> AT1G06700.1 | Symbols: | Protein kinase superfamily protein
| chr1:2052483-2055280 REVERSE LENGTH=1535
Length=1535
Score = 1136 bits (615), Expect = 0.0
Identities = 913/1057 (86%), Gaps = 20/1057 (2%)
Strand=Plus/Plus
Query 69 TCAAATGAGGAGGTGCATCTGAAAAGTCCATGGCAGCAATCTGACGCAAATCAAAAGAA- 127
|||||||| ||| || ||||||||| || |||||||||||| |||||||| |||||
Sbjct 222 TCAAATGAAGAGCAACAACTGAAAAGTTCACAGCAGCAATCTGATGCAAATCATAAGAAT 281
Query 128 TCAAAAACCACCAGCTGTTGCAAAACCTGAGGCGCAGAAGGAAGCTCTTCCCATCGAAGT 187
|| ||||||| || |||||||||||| ||||| |||||||||||||||||||||| ||
Sbjct 282 TC-AAAACCAGCACCTGTTGCAAAACATGAGGTTAAGAAGGAAGCTCTTCCCATCGAGGT 340
Query 188 TCCTCCCTTGTCTGTT-GACGAGGTTAAAGAAAAGACTGACAATTTTGGATCAAAGTCTC 246
|||||||||||| || || ||||| || ||||||||||| ||||||||||| ||| | |
Sbjct 341 CCCTCCCTTGTCT-TTGGATGAGGTCAAGGAAAAGACTGAAAATTTTGGATCCAAGGCAC 399
Query 247 TGATTGGTG-AGGGATCTTATGGAAGGGTATATTATGCAACTCTAAATGATGG-GAAAGC 304
||||||||| |||| |||||||| || ||||||||||| || ||||||||||| | ||
Sbjct 400 TGATTGGTGAAGGG-TCTTATGGGAGAGTATATTATGCGACACTAAATGATGGTG-TGGC 457
Query 305 AGTGGCTTTGAAGAAACTCGATGTTGCCCCTGAAGCTGAAACAAATTCTGAGTTCTTGAG 364
|| ||| |||||||||| ||||| || ||||||||||||||| || | || ||||||||
Sbjct 458 GGTTGCTCTGAAGAAACTTGATGTCGCACCTGAAGCTGAAACAGATACCGAATTCTTGAG 517
Query 365 TCAGGTTTCCATGGTTTCAAGATTGAAGCATGAGAATCTCATTCAACTGGTTGGTTATTG 424
||||||||||||||| || || |||||||||| |||||||||||| || |||||| |||
Sbjct 518 TCAGGTTTCCATGGTCTCTAGGCTGAAGCATGAAAATCTCATTCAATTGCTTGGTTTTTG 577
Query 425 TGTTGATGAAAACCTTCGTGTTCTTGCTTATGAGTTTGCAACAATGGGATCACTGCACGA 484
|||||||| |||||| || || ||||| ||||||||||||||||||||||| |||| ||
Sbjct 578 TGTTGATGGAAACCTCCGCGTCCTTGCATATGAGTTTGCAACAATGGGATCGTTGCATGA 637
Query 485 CATTC-TCCATGGTAGGAAGGGAGTTCAAGGTGCACAGCCTGGTCCAACACTTGACTGGT 543
|| || | ||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct 638 CA-TCTTGCATGGTAGGAAGGGAGTTCAAGGAGCACAACCAGGTCCAACACTTGACTGGA 696
Query 544 TAACAAGGGTGAAGATAGCAGTTGAGGCAGCTAGGGGTTTAGAATACCTTCATGAGAAGG 603
|||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||| |
Sbjct 697 TAACGAGGGTGAAGATAGCGGTTGAGGCAGCTAGGGGTTTGGAATACCTCCATGAGAA-G 755
Query 604 T-TCAGCCTCCTGTGATACATAGAGACATAAGATCTAGCAATGTGCTTCTTTTTGAAGAC 662
| |||||||||||| || ||||| |||||||||||||||||||| |||||||||||||||
Sbjct 756 TCTCAGCCTCCTGTAATCCATAGGGACATAAGATCTAGCAATGTCCTTCTTTTTGAAGAC 815
Query 663 TATC-AAGCAAAAG-TTGCTGATTTCAATCTCTCAAATCAAGCTCCTGATAATGCTGCTC 720
|| | |||| |||| ||||||||||||||||||| |||||||| |||||||||||||| |
Sbjct 816 TA-CAAAGC-AAAGATTGCTGATTTCAATCTCTCGAATCAAGCACCTGATAATGCTGCCC 873
Query 721 GTCTTCACTCTACAAGAGTCTTGGGCACCTTTGGCTATCACGCTCCAGAATATGCTATGA 780
|||||||||| |||||||||||||| || ||||| ||||| |||||||||||||| ||||
Sbjct 874 GTCTTCACTCAACAAGAGTCTTGGGGACTTTTGGTTATCATGCTCCAGAATATGCAATGA 933
Query 781 CCGGACAGTTGACGCAGAAGAGTGACGTGTATAGCTTTGGGGTTGTTCTTCTAGAGCTT- 839
| |||||||| || ||||||||||| ||||| |||||||| ||||| |||||||| |||
Sbjct 934 CTGGACAGTTAACTCAGAAGAGTGATGTGTACAGCTTTGGTGTTGTACTTCTAGAACTTC 993
Query 840 TTGACAGGGAGGAAACCTGTAGATCACACAATGCC-ACGTGGCCAACAAAGTCTTGTAAC 898
|| |||||||||||||| || ||||| || ||||| | | || ||||| |||||||||||
Sbjct 994 TT-ACAGGGAGGAAACCGGTGGATCATACCATGCCTA-GAGGTCAACAGAGTCTTGTAAC 1051
Query 899 CTGGGCTACACCAAGACTCAGTGAAGATAAAGTGAAGCAGTGTGTTGATCCAAAGCTAAA 958
|||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1052 CTGGGCGACACCAAGACTCAGTGAAGATAAAGTGAAACAGTGCATTGATCCAAAGCTAAA 1111
Query 959 AGGAGAATATCCTCCTAAATCAGTAGCTAAGCTAGCAGCGGTGGCAGCATTGTGTGTACA 1018
|| || || ||||| ||| |||| |||||||||||||||||||||||||||||||| ||
Sbjct 1112 AGCCGATTACCCTCCAAAAGCAGTTGCTAAGCTAGCAGCGGTGGCAGCATTGTGTGTGCA 1171
Query 1019 ATACGAATCTGAGTTTAGACCCAACATGAGTATAGTTGTAAAAGCTTTGCAGCCACTTCT 1078
||||||| ||||||||||||| || ||||| |||||||| || || | ||||| || ||
Sbjct 1172 ATACGAAGCTGAGTTTAGACCAAATATGAGCATAGTTGTGAAGGCGCTACAGCCTCTCCT 1231
Query 1079 CAAACCACCAGCACCAGCCCCAGTACCGGAATCCTGA 1115
||||| |||||| |||| |||| ||| ||||| |||
Sbjct 1232 GAAACCTCCAGCAGCAGCTCCAGCACCAGAATCTTGA 1268
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55722604950
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5