BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933625
Length=1279
Score E
Sequences producing significant alignments: (Bits) Value
AT2G30980.1 | Symbols: ASKdZeta, ATSK23, BIL1, ATSK2-2, SKdZeta... 2080 0.0
AT1G06390.1 | Symbols: GSK1, ATGSK1, ATSK22, SK22, BIL2, ATSK2-... 1408 0.0
AT5G26751.1 | Symbols: ATSK11, SK 11 | shaggy-related kinase 11... 453 2e-126
> AT2G30980.1 | Symbols: ASKdZeta, ATSK23, BIL1, ATSK2-2, SKdZeta
| SHAGGY-related protein kinase dZeta | chr2:13182069-13185949
REVERSE LENGTH=1599
Length=1599
Score = 2080 bits (1126), Expect = 0.0
Identities = 1230/1281 (96%), Gaps = 4/1281 (0%)
Strand=Plus/Plus
Query 1 AGTTAGAGCTGTAAAAGCACATGACTTCAATACCATTGGGGCATCCTCAGCCGCCGTCTT 60
|||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||
Sbjct 60 AGTTAGAGCTGTAAAAGCACATGACTTCGATACCATTGGGGCCTCCTCAGCCTCCGTCTT 119
Query 61 TAGCTCCTCAGCCGCCGCATCTTCACGGCGGAGATGCTTTGAAACGTCGTCCCGATATGG 120
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 120 TAGCTCCTCAGCCGCCGCATCTTCACGGCGGAGATTCTTTGAAACGTCGTCCCGATATAG 179
Query 121 ATTC-A-GACAAGGAAATGTCTTCTGCTGTTATAGAAGGAAATGATGCTGTTACCGGTCA 178
| | | ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 180 A--CAACGACAAGGAAATGTCTGCTGCTGTTATAGAAGGAAATGATGCTGTTACCGGTCA 237
Query 179 TATCATTTCTACTACAATTGGTGGCAAAAATGGTGAACCTAAACAGACTATTAGTTACAT 238
|| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 238 CATAATTTCTACTACAATTGGAGGCAAAAATGGTGAACCTAAACAGACCATTAGTTACAT 297
Query 239 GGCCGAACGGGTTGTTGGAACAGGATCATTCGGAATTGTATTCCAGGCAAAATGCTTGGA 298
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 GGCCGAACGTGTTGTTGGAACAGGATCATTCGGAATTGTATTCCAGGCAAAATGCTTGGA 357
Query 299 AACTGGAGAATCAGTAGCCATTAAGAAGGTTTTGCAAGATCGCCGCTATAAAAACCGAGA 358
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 358 AACTGGAGAATCAGTAGCCATTAAGAAGGTTTTGCAAGATCGCCGTTATAAAAACCGAGA 417
Query 359 GTTACAATTAATGCGACTAATGGACCACCCAAATGTGGTTTCCTTGAAGCATTGTTTCTT 418
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 418 GTTGCAATTAATGCGACTAATGGACCATCCAAATGTGGTTTCCTTGAAGCATTGTTTCTT 477
Query 419 CTCTACAACCACTAGAGATGAGCTCTTCCTCAATCTGGTTATGGAGTATGTACCAGAGAC 478
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 478 CTCTACAACGACTAGAGATGAGCTCTTCCTCAATCTCGTTATGGAGTATGTACCAGAGAC 537
Query 479 GCTGTACCGGGTTTTGAAGCACTATACTGGTTCAAACCAGCGGATGCCTATTTTCTATGT 538
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 538 ATTGTACCGGGTTTTGAAGCACTATACTAGTTCAAACCAGCGGATGCCTATCTTCTATGT 597
Query 539 CAAACTTTACACATACCAAATCTTCAGAGGCTTGGCTTATATCCATACTGCTCCTGGTGT 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 CAAACTTTACACATACCAAATCTTCAGAGGCTTGGCTTATATCCATACTGCTCCTGGTGT 657
Query 599 CTGCCACAGAGATGTGAAACCTCAAAATCTTTTGGTTGATCCCCTCACCCATCAGTGTAA 658
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 658 CTGCCACAGAGATGTGAAACCACAAAATCTTTTGGTTGATCCCCTCACCCATCAGTGTAA 717
Query 659 GCTCTGTGATTTTGGAAGTGCAAAAGTATTGGTGAAAGGTGAAGCAAACATATCATATAT 718
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 718 GCTCTGTGATTTTGGAAGTGCAAAAGTACTGGTGAAAGGTGAAGCAAACATATCATATAT 777
Query 719 CTGTTCTCGGTATTACCGAGCTCCAGAACTCATCTTTGGGGCTACAGAGTATACATCATC 778
||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 778 CTGCTCTCGGTATTACCGAGCTCCAGAACTCATCTTTGGTGCCACAGAGTATACATCATC 837
Query 779 CATTGATATATGGTCTGCTGGTTGTGTTCTGGCAGAGCTCCTACTTGGCCAGCCGTTATT 838
||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct 838 CATTGATATATGGTCTGCTGGTTGTGTTCTGGCAGAGCTACTTCTTGGGCAGCCGTTATT 897
Query 839 CCCCGGAGAGAACTCTGTGGATCAGCTAGTGGAGATCATAAAGGTTCTTGGTACTCCAAC 898
||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 898 CCCGGGAGAAAATTCTGTGGACCAGCTAGTGGAGATCATAAAGGTTCTTGGTACTCCAAC 957
Query 899 TCGAGAAGAAATTCGATGCATGAACCCAAACTACACCGACTTCAGATTCCCACAAATCAA 958
||| |||||||| || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 958 TCGCGAAGAAATCCGGTGCATGAACCCAAACTACACAGACTTCAGATTCCCACAAATCAA 1017
Query 959 AGCTCACCCTTGGCATAAGGTTTTCCACAAGCGGATGCCTCCAGAAGCCATTGACCTCGC 1018
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 1018 AGCCCACCCTTGGCATAAGGTTTTCCACAAGCGGATGCCTCCGGAAGCCATTGACCTTGC 1077
Query 1019 ATCTCGACTTCTTCAATACTCACCAAGTCTACGTTGCACTGCGCTCGAAGCATGTGCACA 1078
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1078 ATCTCGGCTTCTTCAATACTCACCAAGTCTACGTTGCACTGCGCTCGAGGCATGTGCGCA 1137
Query 1079 TCCGTTTTTCAATGAACTCCGTGAGCCAAATGCTCGTCTTCCAAATGGCCGACCTCTACC 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 TCCGTTTTTCAATGAACTCCGTGAGCCAAATGCTCGTCTTCCAAATGGCCGACCTCTACC 1197
Query 1139 ACCGTTGTTCAACTTCAAACAAGAGTTGTCTGGGGCGTCACCGGAGCTTATCAACAGGCT 1198
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1198 ACCGTTGTTCAACTTCAAACAAGAGTTGTCTGGGGCTTCACCGGAGCTTATCAACAGGCT 1257
Query 1199 AATACCAGAGCATGTGAGGCGACAGATGAATGGTGGCTTTCCATTTCAAGCTGGTCCCTA 1258
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1258 AATACCAGAGCATGTGAGGCGACAGATGAATGGTGGCTTTCCATTTCAAGCTGGACCCTA 1317
Query 1259 GAAAAACGATTTCGAAATGCT 1279
||||| |||| |||| |||||
Sbjct 1318 GAAAAGCGATCTCGAGATGCT 1338
> AT1G06390.1 | Symbols: GSK1, ATGSK1, ATSK22, SK22, BIL2, ATSK2-3
| GSK3/SHAGGY-like protein kinase 1 | chr1:1946788-1950755
FORWARD LENGTH=1634
Length=1634
Score = 1408 bits (762), Expect = 0.0
Identities = 1072/1222 (88%), Gaps = 20/1222 (2%)
Strand=Plus/Plus
Query 13 AAAAGCACATGACTTCAATACCATTGGGGCATCCTCAGCCGCCGT-CT-TTAGCTCCTCA 70
||||||||||| | ||| ||||||||||| |||||||| | | || || ||| | |
Sbjct 65 AAAAGCACATGGCCTCATTACCATTGGGG---CCTCAGCC-TCATGCTCTT-GCT-C-C- 116
Query 71 GCCGCCGCATCTTCACGGCGGAGATGCTTTGAAACGTCGTCCCG-ATATGGATTCAGACA 129
||||| ||| ||||||| ||| || ||||||||||| ||||| | || ||||||| || |
Sbjct 117 GCCGCTGCAGCTTCACGACGGCGACGCTTTGAAACGCCGTCCTGAAT-TGGATTCTGATA 175
Query 130 AGGAAATGTCTTCTGCTGTTATAGAAGGAAATGATGCTGTTACCGGTCATATCATTTCTA 189
||||||||||| | |||||||| || |||||||| |||||||| |||||||||||||| |
Sbjct 176 AGGAAATGTCTGCAGCTGTTATTGAGGGAAATGACGCTGTTACTGGTCATATCATTTCCA 235
Query 190 CTACAATTGGTGGCAAAAATGGTGAACCTAAA-CAGACTATTAGTTACATGGCCGAACGG 248
|||| ||||| |||||||| || ||||| ||| ||||| |||||||||||||| || |||
Sbjct 236 CTACTATTGGAGGCAAAAACGGCGAACC-AAAGCAGACCATTAGTTACATGGCTGAGCGG 294
Query 249 GTTGTTGGAACAGGATCATTCGGAATTGTATTCCAGGCAAAATGCTTGGAAACTGGAGAA 308
|||||||||||||| |||||||| ||||| || ||||| |||||||||||||||||||||
Sbjct 295 GTTGTTGGAACAGGTTCATTCGGGATTGTTTTTCAGGCGAAATGCTTGGAAACTGGAGAA 354
Query 309 TCAGTAGCCATTAAGAAGGTTTTGCAAGATCGCCGCTATAAAAACCGAGAGTTACAATTA 368
|||||||||||||| ||||| ||||||||||| |||||||||||||| ||||| ||| ||
Sbjct 355 TCAGTAGCCATTAAAAAGGTCTTGCAAGATCGACGCTATAAAAACCGTGAGTTGCAACTA 414
Query 369 ATGCGACTAATGGACCACCCAAATGTGGTTTCCTTGAAGCATTGTTTCTTCTCTACAACC 428
||||||| |||||| ||||||||||| | ||||||||||| |||||||||||||||||
Sbjct 415 ATGCGACCAATGGATCACCCAAATGTCATCTCCTTGAAGCACTGTTTCTTCTCTACAACG 474
Query 429 ACTAGAGATGAGCTCTTCCTCAATCTGGTTATGGAGTATGTACCAGAGACGCTGTACCGG 488
| ||||||||||||||||||||| || ||||||||||||||||| ||||| | ||||||
Sbjct 475 AGTAGAGATGAGCTCTTCCTCAACCTTGTTATGGAGTATGTACCTGAGACTTTATACCGG 534
Query 489 GTTTTGAAGCACTATACTGGTTCAAACCAGCGGATGCCTATTTTCTATGTCAAACTTTAC 548
||||||| |||||||||| |||| || ||| ||||||| |||||||||||||| ||||||
Sbjct 535 GTTTTGAGGCACTATACTAGTTCTAATCAGAGGATGCCAATTTTCTATGTCAAGCTTTAC 594
Query 549 ACATACCAAATCTTCAGAGGCTTGGCTTATATCCATACTGCTCCTGGTGTCTGCCACAGA 608
||||| |||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||||
Sbjct 595 ACATATCAAATCTTTAGAGGTTTGGCTTACATCCATACTGTTCCCGGTGTTTGCCACAGA 654
Query 609 GATGTGAAACCTCAAAATCTTTTGGTTGATCCCCTCACCCATCAGTGT-AAGCTCTGTGA 667
||||||||||| |||||||| |||||||||||| | ||||||||| || ||||| |||||
Sbjct 655 GATGTGAAACCACAAAATCTCTTGGTTGATCCCTTGACCCATCAG-GTTAAGCTGTGTGA 713
Query 668 TTTTGGAAGTGCAAAAGTATTGGTGAAAGGTGAAGCAAACATATCATATATCTGTTCTCG 727
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||
Sbjct 714 TTTTGGAAGTGCAAAAGTATTGGTCAAAGGTGAACCAAACATATCATATATCTGCTCCCG 773
Query 728 GTATTACCGAGCTCCAGAACTCATCTTTGGGGCTACAGAGTATACATCATCCATTGATAT 787
||||| || ||||||||||| |||||||| || |||||||||||| ||||||| |||||
Sbjct 774 TTATTATCGTGCTCCAGAACTGATCTTTGGCGCCACAGAGTATACAGCATCCATAGATAT 833
Query 788 ATGGTCTGCTGGTTGTGTTCTGGCAGAGCTCCTACTTGGCCAGCCGTTATTCCCCGGAGA 847
|||||||||||||||||| ||||||||||| || || |||||||||||||| || |||||
Sbjct 834 ATGGTCTGCTGGTTGTGTACTGGCAGAGCTTCTTCTGGGCCAGCCGTTATTTCCAGGAGA 893
Query 848 GAACTCTGTGGATCAGCTAGTGGAGATCATAAAGGTTCTTGGTACTCCAACTCGAGAAGA 907
|| || || |||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 894 AAATTCAGTTGATCAGCTTGTGGAGATCATAAAGGTTCTTGGTACTCCAACTCGTGAAGA 953
Query 908 AATTCGATGCATGAACCCAAACTACACCGACTTCAGATTCCCACAAATCAAAGCTCACCC 967
||||||||| |||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct 954 AATTCGATGTATGAACCCGAACTACACAGATTTTAGGTTCCCACAAATCAAAGCTCACCC 1013
Query 968 TTGGCATAAGGTTTTCCACAAGCGGATGCCTCCAGAAGCCATTGACCTCGCATCTCGACT 1027
|||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| ||
Sbjct 1014 TTGGCACAAGGTTTTTCATAAACGGATGCCTCCAGAAGCAATAGACCTTGCATCTCGGCT 1073
Query 1028 TCTTCAATACTCACCAAGTCTACGTTGCACTGCGCTCGAAGCATGTGCACATCCGTTTTT 1087
||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1074 TCTTCAATATTCACCAAGTCTACGCTGCACTGCGCTCGAAGCATGTGCTCATCCGTTTTT 1133
Query 1088 CAATGAACTCCGTGAGCCAAATGCTCGTCTTCCAAATGGCCGACC-TCTACCACCGTTGT 1146
|||||||||||| |||||||| || |||||||||||||| || || | |||| || ||||
Sbjct 1134 CAATGAACTCCGAGAGCCAAACGCCCGTCTTCCAAATGGTCGTCCAT-TACCGCCATTGT 1192
Query 1147 TCAACTTCAAACAAGAGTT-GTCTGGGGCGTCACCGGAGCTTATCAACAGGCTAATACCA 1205
|||| |||||||||||||| | ||| || ||| |||||| |||||||||||||||||
Sbjct 1193 TCAATTTCAAACAAGAGTTAGG-TGGAGCTTCAATGGAGCTAATCAACAGGCTAATACCT 1251
Query 1206 GAGCATGTGAGGCGACAGATGA 1227
||||||||||| ||||| ||||
Sbjct 1252 GAGCATGTGAGACGACAAATGA 1273
> AT5G26751.1 | Symbols: ATSK11, SK 11 | shaggy-related kinase
11 | chr5:9399377-9402476 REVERSE LENGTH=1666
Length=1666
Score = 453 bits (245), Expect = 2e-126
Identities = 688/898 (77%), Gaps = 46/898 (5%)
Strand=Plus/Plus
Query 177 CATATCATTTCT-ACTACAATTGGTGGCAAAAATGGTGAACCTAAACAGACTATTAGTTA 235
||||||| || | ||||| |||||||| | |||||| |||| |||||||| ||||| ||
Sbjct 391 CATATCA-TTGTGACTACTATTGGTGGTAGAAATGGCCAACCAAAACAGACAATTAGCTA 449
Query 236 CATGGCCGAACGGGTTGTTGGAACA-GGATCATTCGGAATTGTATTCCAGGCAAAATG-C 293
|||||| || || |||||||| || ||||| || || |||| ||||| || ||||| |
Sbjct 450 CATGGCTGAGCGTGTTGTTGG-TCACGGATCTTTTGGTGTTGTGTTCCAAGCGAAATGTC 508
Query 294 TTGGAAACTGGAGAATCAGTAGCCATTAAGAAGGTTTTGCAAGATCGCCGCTATAAAAAC 353
|| || || |||||| | || || || ||||| ||||| |||||| | | || || |||
Sbjct 509 TT-GAGACAGGAGAAACTGTTGCGATAAAGAAAGTTTTACAAGATAGGAGGTACAAGAAC 567
Query 354 CGAGAG-TTACAATTAATGCGACTAATGGACCACCCAAATGTGGTTTCCT-TGAAGCATT 411
|| ||| || ||| ||| | ||| | ||||| || ||||| || | || |||| ||||
Sbjct 568 CGTGAGCTT-CAAACCATGAGGCTACTTGACCATCCTAATGTTGTGT-CTCTGAAACATT 625
Query 412 GTTTCTTCTCTACAACCACT---AGAGATGAGCTCTT-CCTCAATCTGGTTATGGAGTAT 467
||||| | ||| |||||||| | ||||||||| || ||||||||| ||| | |||||
Sbjct 626 GTTTC-T-TCT-CAACCACTGAAAAAGATGAGCT-TTACCTCAATCTTGTTCTTGAGTAC 681
Query 468 GTACCAGAGACGCTG-T-ACCGGGTTTTGAAGCACTA-TACTGGTTCAAACCAGCGGATG 524
|| ||||| | ||| | | || ||| | || ||||| || | || ||| | |||
Sbjct 682 GTTCCAGA-A-ACTGTTCATCGTGTTATCAAACACTACAACAAACT-GAATCAGAGAATG 738
Query 525 CCTATTTTCTATGTCAAACTTTACACATACCAAATCTTCAGAGGCTTGGCTTATA-TC-C 582
||| || | || |||||||||||||| || || || || |||| ||| |||| | || |
Sbjct 739 CCTCTTATATACGTCAAACTTTACACTTATCAGATTTTTAGAGCCTTATCTTACATTCAC 798
Query 583 ATACTGCTCCTGGTGTCTGCCA-CAGAGATGTGAAACCTCAAAATCTT-TTGGTTGATCC 640
| ||| |||||| || || | | || | ||||||||||| ||| ||||| ||||
Sbjct 799 CGA-TGC-ATTGGTGTGTGTCATC-GTGACATAAAACCTCAAAA-CTTGTTGGTAAATCC 854
Query 641 CCTCACCCATC-AGTGTAAGCTCTGTGATTTTGGAAGTGCAAAAGTATTGGTGAAAGGTG 699
| ||| |||| ||| ||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct 855 GCACACTCATCAAGT-AAAGCTATGTGATTTTGGAAGTGCAAAAGTATTGGTAAAAGGAG 913
Query 700 AAGCAAACATATCATATATCTGTTCTCGGTATTACCGAGCTCCAGAACTCATCTTTGGGG 759
|| ||||||| || || ||||| || |||||||| |||| || ||||| || ||||| |
Sbjct 914 AACCAAACATTTCCTACATCTGCTCGAGGTATTACAGAGCACCTGAACTTATTTTTGGAG 973
Query 760 CTACAGAGTATAC-ATCATCCATTGATATATGGTCTGCTGGTTGTGTTCTGGCAGAGCTC 818
| || |||||||| | || |||||||| | |||||||| || |||||||| || || ||
Sbjct 974 CAACCGAGTATACGA-CAGCCATTGATGTCTGGTCTGCAGGATGTGTTCTAGCTGAACTA 1032
Query 819 CTACTTGGCCAGCCGTTATTCCCCGGAGAGAACTCTGTGGATCAGCTAGTGGAGATCATA 878
| ||||| ||||| || ||||| || |||| | ||| ||||| || || ||||| ||
Sbjct 1033 TTGCTTGGACAGCCCTTGTTCCCTGGTGAGAGCGGTGTTGATCAACTTGTAGAGATTATC 1092
Query 879 AAGGTTCTTGGTA-CTCCAACTCGAGAAGAAATTCGA-TGCATGAACCCAAACTACACCG 936
||||| ||||| | | || ||| |||||||||| | | |||||||||||||||||||| |
Sbjct 1093 AAGGT-CTTGGGAACGCCTACTAGAGAAGAAAT-CAAGTGCATGAACCCAAACTACACGG 1150
Query 937 ACTTCAGATTCCCACAAATCAAAGCTCACCCTTGGCATAAGGTTTTCCACAAGCGGATGC 996
| |||| |||||| || || |||||||| || ||||| ||| |||||||||| || ||||
Sbjct 1151 AATTCAAATTCCCTCAGATTAAAGCTCATCCATGGCACAAGATTTTCCACAAACGCATGC 1210
Query 997 CTCCAGAAGCCATTGACCTCGCATCTC--GACTTCTTCAATACTCACC-AAGTCTACG 1051
|||||||||| |||| | | |||| |||||||||||||||| || || ||||||
Sbjct 1211 CTCCAGAAGCTGTTGATTTGG--TCTCAAGACTTCTTCAATACTCTCCTAA-TCTACG 1265
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62901282885
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5