BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg933650 Length=603 Score E Sequences producing significant alignments: (Bits) Value AT2G26720.1 | Symbols: | Cupredoxin superfamily protein | chr2... 544 5e-154 AT2G31050.1 | Symbols: | Cupredoxin superfamily protein | chr2... 387 9e-107 > AT2G26720.1 | Symbols: | Cupredoxin superfamily protein | chr2:11384782-11385402 FORWARD LENGTH=621 Length=621 Score = 544 bits (294), Expect = 5e-154 Identities = 390/436 (89%), Gaps = 7/436 (2%) Strand=Plus/Plus Query 22 ATGGCTTTGATTAAGAACAACGTCGTCTTTTTCACTTCATTGTTGATTCTTGTAACTCTT 81 |||||||||||||||||||| | ||||||||||||| ||| ||||| |||| |||||| Sbjct 1 ATGGCTTTGATTAAGAACAA---CATCTTTTTCACTTCTTTGCTGATTTTTGTGACTCTT 57 Query 82 TTAGGTGTTACCGTTGGAGGAACCGTTCACAAAGTCGGTGACACTAAAGGGTGGACGATG 141 || || ||| |||||||||||||||||||||||||||| |||| ||||| ||||||||| Sbjct 58 TTTGGAGTTGCCGTTGGAGGAACCGTTCACAAAGTCGGCAACACGAAAGGATGGACGATG 117 Query 142 GCGGGAGTCGATTACGAGGATTGGGCTTCTTCAAAAACTTTTCAAGTGGGAGATTCTTTG 201 |||| |||||| |||| |||||||||||||| | ||||||||| ||||| || || Sbjct 118 ATTGGAGGCGATTATGAGGCTTGGGCTTCTTCAAGAGTTTTTCAAGTCGGAGACACTCTG 177 Query 202 GTCTTCGCATACAACAAAGATTTCCACGACGTCACGGAAGTCACTCACAATGATTTCGAG 261 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 178 GTCTTCGCATACAACAAAGATTACCACGACGTCACGGAAGTCACTCACAATGATTTCGAG 237 Query 262 CTGTGTGAATCGTCTAAACCACTTAA-GAGATACAAAACCGGGTCCGACTCAATCAGTCT 320 ||||||||||||||||||| | ||| ||||||||| |||||||| |||||||||||||| Sbjct 238 ATGTGTGAATCGTCTAAACCGC-TAAGGAGATACAAGACCGGGTCTGACTCAATCAGTCT 296 Query 321 AACCAAACCGGGACTCCAACACTTCATATGCGGAGTTCCTGGTCATTGCAACATAGGG-C 379 |||||||||||||||||||||||||||||||||||||||||| || ||||| | |||| | Sbjct 297 AACCAAACCGGGACTCCAACACTTCATATGCGGAGTTCCTGGACACTGCAAGA-AGGGAC 355 Query 380 AAAAGCTTCTAATCCATGTCTTACCGGCTTCGTTGGGTCCCGTCGCTGCTCCGGTTCCTG 439 ||||||||| |||||||||||||||||| || ||||||| |||||||| ||||||||||| Sbjct 356 AAAAGCTTCAAATCCATGTCTTACCGGCCTCATTGGGTCACGTCGCTGTTCCGGTTCCTG 415 Query 440 GACCTGTCCGATCACA 455 |||| ||||||||||| Sbjct 416 GACCGGTCCGATCACA 431 > AT2G31050.1 | Symbols: | Cupredoxin superfamily protein | chr2:13212150-13212752 FORWARD LENGTH=603 Length=603 Score = 387 bits (209), Expect = 9e-107 Identities = 367/441 (83%), Gaps = 19/441 (4%) Strand=Plus/Plus Query 22 ATGGCTTTGATTAAGAA-CAACGTCGTCTT-TTTCACTTCATTG-TTGATTCTTGTAACT 78 ||||||||||| || || ||||| | ||| ||| ||||| ||| || ||||||||| | Sbjct 1 ATGGCTTTGATCAA-AAGCAACG-C--CTTCTTT-ACTTCTTTGCTT-ATTCTTGTAGCA 54 Query 79 CTTTTAGGTGTTACCGTTGGAGGAACCGTTCACAAAGTCGGTGACACTAAAGGGTGGACG 138 ||||| || || ||||||||||||||||||||||||| |||||| | | || |||||| Sbjct 55 CTTTTTGGAATTTCCGTTGGAGGAACCGTTCACAAAGTTGGTGACTCCGACGGATGGACG 114 Query 139 ATGGCGGGAGTCGATTACGAGGA-TTGGGCTTCTTCAAAAACTTTTCAAGTGGGAGATTC 197 || | | ||| | ||||| || ||||| ||| ||| |||||||||||| ||||| || Sbjct 115 ATTATGAGCGTCAACTACGA-GACATGGGCATCTACAATAACTTTTCAAGTTGGAGACTC 173 Query 198 TTTGGTCTTCGCATACAACAAAGATTTCCACGACGTCACGGAAGTCACTCACAATGATTT 257 |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 174 TTTGGTCTTCAAATACAACAAAGACTTCCACGACGTCACCGAAGTCACTCACAATGATTA 233 Query 258 CGAGCTGTGTGAATCGTCTAAACCACTTAAG--AGATACAAAACCGGGTCCGA-CTCAAT 314 |||| |||||||| |||| ||||| | | || |||||| | |||||||| || || | Sbjct 234 CGAGATGTGTGAACCGTCCAAACCGC-T-AGCAAGATACGAGACCGGGTCTGATATC-GT 290 Query 315 CAGTCTAACCAAACCGGGACTCCAACACTTCATATGCGGAGTTCCTGGTCATTGCAACAT 374 || ||||||||||||||||||||||||||||||||||||| |||||||||| || |||| Sbjct 291 CATTCTAACCAAACCGGGACTCCAACACTTCATATGCGGATTTCCTGGTCACTGTGACAT 350 Query 375 AGGG-CAAAAGCTTCTAATCCATGTCTTACCGGCTTCGTTGGGTCCCGTCGCTGCTCCGG 433 ||| |||||||||| ||||||||| ||||| || || ||||| || ||||||||||||| Sbjct 351 -GGGACAAAAGCTTCAAATCCATGTATTACCAGCCTCATTGGGACCTGTCGCTGCTCCGG 409 Query 434 TTCCTGGACCTGTCCGATCAC 454 |||||||||| |||||| ||| Sbjct 410 TTCCTGGACCCGTCCGACCAC 430 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29035336966 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5