BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933667
Length=1630
Score E
Sequences producing significant alignments: (Bits) Value
AT2G31250.1 | Symbols: HEMA3 | Glutamyl-tRNA reductase family p... 2061 0.0
AT1G09940.1 | Symbols: HEMA2 | Glutamyl-tRNA reductase family p... 1397 0.0
AT1G58290.1 | Symbols: HEMA1 | Glutamyl-tRNA reductase family p... 852 0.0
> AT2G31250.1 | Symbols: HEMA3 | Glutamyl-tRNA reductase family
protein | chr2:13319621-13321526 REVERSE LENGTH=1656
Length=1656
Score = 2061 bits (1116), Expect = 0.0
Identities = 1437/1588 (90%), Gaps = 38/1588 (2%)
Strand=Plus/Plus
Query 21 ATGGCGGTTTCTAATGCCTTTGTTGTTGTTAGCCCG-ATGCTGAAGACATCGTCGTCGTC 79
||||||||||||||||||| ||||||| |||||||| || ||| ||||| |||||
Sbjct 1 ATGGCGGTTTCTAATGCCTCTGTTGTTCTTAGCCCGAAT-CTGGAGACA------TCGTC 53
Query 80 GTCATCGAATCACCATAATCCGTCTTCTTCTTCTCCGGACCTGATTAGGATTCATACTCT 139
||||| | |||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 54 GTCATGGTATCACCATAATCCGTCTTCTTC-TCT--AGACCTGATTAGGATTCATACTCT 110
Query 140 TTCGATGAACAATAGGACAAGAAGAGGTCTGATCCAGAGAGCGCGTTGCGAG-CTTTGTC 198
| ||||||| || | |||||| |||||| |||| ||||||| |||||||||| | || ||
Sbjct 111 TCCGATGAATAAGATGACAAGGAGAGGTTTGATACAGAGAGTGCGTTGCGAGAC-TTCTC 169
Query 199 CGTCCAACGACTCATCGGCTCTGAACCAGCTTAAGAATTCTCCTACAAATGACAGATACA 258
|||||| |||||||||| ||||| || ||||||||||||||||| ||| |||||||||||
Sbjct 170 CGTCCAGCGACTCATCGCCTCTGGACAAGCTTAAGAATTCTCCTGCAATTGACAGATACA 229
Query 259 CAAGGGAGAGAAGCAGCATTGTGGTGATTGGGCTTAGCTATCACAAAGCTACTCTAGAGA 318
||||||||||||||||||||||||||||||||||||||| ||||| | || |||||||||
Sbjct 230 CAAGGGAGAGAAGCAGCATTGTGGTGATTGGGCTTAGCTTTCACACATCTCCTCTAGAGA 289
Query 319 TGCGTGAGAAGCTTGCCATTCCTGAAGCTGAATGGCCACGAGCTATTACTCAGTTGTGCG 378
||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||
Sbjct 290 TGCGTGAGAGGCTTGCTATTCCTGAAGCTGAATGGCCACTAGCTATCACTCAGTTGTGCG 349
Query 379 CTTTGAATCACATTGAAGAAGCTGCTGTTCTCAGTACCTGCAACCGTATCGAGATTTATG 438
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 350 CTTTGAATCACATCGAAGAAGCTGCTGTTCTCAGTACCTGCAACCGTATCGAGATTTATG 409
Query 439 TTTCCGCTCTTTCTCGCCACCGTGGTGTCAAAGAAGTCACTGACTGGATGTCTAAGAGAA 498
| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 410 TATCCGCTCTTTCTCGTTACCGTGGTGTCAAAGAAGTCACTGAATGGATGTCTAAGAGAA 469
Query 499 GTGGAATTCCAGTTTCTGACATCTGTCATCACCGGTTTCTGTTGTACAACAAAGACGCCA 558
|||| ||||||||||| || |||||||| || ||||||||||||||||||||||||||||
Sbjct 470 GTGGGATTCCAGTTTCGGATATCTGTCAGCATCGGTTTCTGTTGTACAACAAAGACGCCA 529
Query 559 CACAACATCTATTTCAAGTCTCCGCTGGTCTGGAATCTCTTGTCATAGGAGAAAATCAGA 618
| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 530 CGCAACATCTGTTTCAAGTCTCAGCTGGTCTGGAATCTCTTGTCATAGGAGAAAATCAGA 589
Query 619 TACAATCACAGGTTA-AACAAGTTGAGA-AAGTAGTTAAACAACAAGGGTTTGGGAGGAT 676
||||||||||||||| || ||| ||| | |||||||||||||| ||||||||||||||||
Sbjct 590 TACAATCACAGGTTAGAA-AAGCTGA-ACAAGTAGTTAAACAAGAAGGGTTTGGGAGGAT 647
Query 677 TATCAGTGCGCTATTTGAAAAGGCAATCAAGGCTGGAAAGCGTGTCAGAGAAGAGACAAA 736
||||||| | |||||||||||||||| ||||||||||||||||||||||| | |||| ||
Sbjct 648 TATCAGTACTCTATTTGAAAAGGCAAACAAGGCTGGAAAGCGTGTCAGAGCACAGACGAA 707
Query 737 CATCGCGTCTGGGGCTGTTTCCGTTAGCTCTGCTGCCA-TCGAACTTGCTCTCACTAAGC 795
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 708 TATCGCGTCTGGGGCTGTTTCCGTTAGCTCTGCTG-CAGTCGAACTTGCTCTCACTAAGC 766
Query 796 TTCCAGGATCTGTATCATCTGCTATGATGTTGGTAATTGGTGCAGGA-ACGATGGGGAAG 854
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 767 TTCCAGGATCTGTATCATCTGCTATGATGTTGGTAATTGGTGCAGGAGA-GATGGGGAAG 825
Query 855 CTTGTAATCAAGCACCTGGTTGCTAAAGGTTGCACTGAAATGGTGGTTATGAACCGAAGC 914
| | ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 826 CGTATAATCGAGCACCTGGTTGCTAAAGGTTGCACTAAAATGGTGGTTATGAACCGGAGC 885
Query 915 CAAGAGAAAGTTGCAGCTATCCGCGAGAAGATGCCGCCTGGCGTTAAGATTATCTATAGA 974
|||| |||||||||||||||||| || |||||| | |||||||| ||||||| |||| |
Sbjct 886 GAAGATAAAGTTGCAGCTATCCGCAAGGAGATGCAGTCTGGCGTTGAGATTATTTATAAA 945
Query 975 CCC-TTAGATGAGATGCTAGCTTGTGCTTCAGAAGCCAACGTAATCTTTACTAGCACAGC 1033
||| || || ||||| |||||||||||| ||||||||||||| || |||||||||||| |
Sbjct 946 CCCCTT-GACGAGATTCTAGCTTGTGCTGCAGAAGCCAACGTGATTTTTACTAGCACATC 1004
Query 1034 ATCTGAGACACCATTGTTCTTGAAGGAGCACGTAGAGATCCTCCCTCCTTGTCCTGCAGA 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1005 ATCTGAGACACCATTGTTCTTGAAGGAGCACGTAGAGATCCTCCCTCCTTGTCCTGCAGA 1064
Query 1094 TGTAGATGCGAGGCTCTTTGTTGATATCTCTGTTCCTAGAAATGTTGGCTCTTGTGTAGC 1153
| || |||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1065 T-TA--TGCGAGGCTCTTTGTTGATATCTCTGTTCCTAGAAATGTTGGGTCTTGTGTTGC 1121
Query 1154 TGAATTAGACAGTGCACGGGTTTACAACGTGGATGACCTCAAGGAAGTTGTTGCTGCCAA 1213
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1122 TGAATTAGACAGTGCACGGGTTTACAACGTTGATGACCTCAAGGAAGTTGTTGCTGCCAA 1181
Query 1214 TATGGAAGACAGGGCGAGGAAAGCAATGGAAGCTCGGGATATAATAACAGAGGAGTCAAT 1273
|| |||||||||||||||||| |||||||||||| |||||||| ||||||| ||||
Sbjct 1182 TAAAGAAGACAGGGCGAGGAAATCAATGGAAGCTCTCCCTATAATAAGAGAGGAGACAAT 1241
Query 1274 AAAGTTTGAAGGGTGGAGGGATTCGATG-A--CGTTTCCAACAATCAAGAAATTAAGAAG 1330
| ||||||||||||||||||||||| || | ||||||||||||||| ||||||||||||
Sbjct 1242 AGAGTTTGAAGGGTGGAGGGATTCGCTGCAGACGTTTCCAACAATCAGGAAATTAAGAAG 1301
Query 1331 CAAAACAGAGAAAATCAGAGCTGC-TGCTGTTGAAAAATTCATGTCGAAATATGGCAAAG 1389
||||||||||| ||||||||||| || |||||||||||| || |||||| |||| || |
Sbjct 1302 CAAAACAGAGAGAATCAGAGCTGAATG-TGTTGAAAAATTAATCTCGAAACATGGGAATG 1360
Query 1390 ACATGGACAAGAAGACGAGGGAAGCAGTAGAGAATGTAACCCTAGAG--ATAGTGAACAG 1447
||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct 1361 GCATGGACAAAAAGACGAGGGAAGCAGTAGAGAAACAAACC--AGAATTATAGTGAACAA 1418
Query 1448 GATCCTGCACGACCCAATGAAACATTTGAGATGCGATGGGACTGATAGCAG-AATGCTGC 1506
|||||| | ||||||||||||||||||||| ||||||||||| |||||| || |||||
Sbjct 1419 TATCCTGGATTACCCAATGAAACATTTGAGATACGATGGGACTGGTAGCAGCAA-GCTGC 1477
Query 1507 ATGAGACTCTAGAGAACATGCAGGCTGTGAACAGAATGTATGAACTCGACGCAGAGTTAC 1566
||||| |||||||| |||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 1478 GGGAGACGCTAGAGAATATGCAGGCTGTGAACAGAATTTATGAACTCGACGGAGAGTTAC 1537
Query 1567 TCGAGGAGAAGATTAGAGCAAA-AAAGA 1593
|||||||||||||||||| ||| |||||
Sbjct 1538 TCGAGGAGAAGATTAGAGAAAAGAAAGA 1565
> AT1G09940.1 | Symbols: HEMA2 | Glutamyl-tRNA reductase family
protein | chr1:3236995-3239554 REVERSE LENGTH=2114
Length=2114
Score = 1397 bits (756), Expect = 0.0
Identities = 1391/1680 (83%), Gaps = 114/1680 (7%)
Strand=Plus/Plus
Query 1 TTGC-TTGT-AAACAC-AAAGCTATGGCGGTTTCTAATGCCTTTGTTGTTGTTAGC-CCG 56
|||| |||| |||| | ||| ||||||||||||||| ||| | | ||||||| | |||
Sbjct 270 TTGCTTTGTAAAACTCAAAATCTATGGCGGTTTCTAGCGCC--T-TCGTTGTTA-CACCG 325
Query 57 ATGCTGAAGACATCGTCGTCGTCGTCATCGAATCACCATAAT-C--CGTCTTCTTCTTCT 113
| |||| ||| | | | | || | | |||||||||||||| | ||| ||||||||||
Sbjct 326 AAGCTGGAGA-A--G-C-T-GT--T-AGCGAATCACCATAATCCAACGTATTCTTCTTCT 376
Query 114 CCGG-ACC--T-GAT-T-A---GGATTCATACTCTTTCGATGAACAATAGG-ACAAGAAG 163
|||| || | ||| | | |||| | | ||||| |||||||||||||| ||||| |
Sbjct 377 CCGGCCCCGTTGGATGTAATTGGGATACGTGCTCTTCCGATGAACAATAGGAACAAG-CG 435
Query 164 AGGTCTGATCCAGAGAGCGCGTTGCGAGCTTTGTCCGTC---CAACG-A-CT--CA--TC 214
|||||||||||||||||||||||||||| ||| |||||| || | | || || ||
Sbjct 436 AGGTCTGATCCAGAGAGCGCGTTGCGAGATTTCTCCGTCTAATAAGGCAGCTAGCATCTC 495
Query 215 GGCTCT-GAACCAGCTTAAGAATTCTCCTACAAATGACAGATACAC-AAGGGAGAGAAGC 272
||||| | | ||||| |||| |||| || | |||| ||||||| || ||| ||||||
Sbjct 496 AGCTCTCG-AGCAGCTCAAGACTTCTGCT---ATTGACCGATACACTAA-GGAAAGAAGC 550
Query 273 AGCATTGTGGTGATTGGGCTTAGCTAT-CACAAAGCTACTCTAGAGATGCGTGAGAAGCT 331
|||||||||||||||||||||||| || |||| |||| || | |||||||||||||||||
Sbjct 551 AGCATTGTGGTGATTGGGCTTAGC-ATTCACACAGCTCCTGTTGAGATGCGTGAGAAGCT 609
Query 332 TGCCATTCCTGAAGCTGAATGGCCACGAGCTATTACTCAGTTGTGCGCTTTGAATCACAT 391
||||||||| |||||||||||||||||||||||| || | ||||| | ||||||||| ||
Sbjct 610 TGCCATTCCAGAAGCTGAATGGCCACGAGCTATTGCTGAATTGTGTGGTTTGAATCATAT 669
Query 392 TGAAGAAGCTGCTGTTCTCAGTACCTGCAACCGTATCGAGATTTATGTTTCCGCTCTTTC 451
||||||||||||||| ||||||||||||||||| || ||||||||||||| ||||| ||
Sbjct 670 TGAAGAAGCTGCTGTACTCAGTACCTGCAACCGAATGGAGATTTATGTTTTGGCTCTATC 729
Query 452 TC-GCCACCGTGGTGTCAAAGAAGTCACTGACTGGATGTCTAAGAGAAGTGGAATTCCAG 510
|| || | ||||| ||||||||||| ||||| ||||||||||||| ||||||||| || |
Sbjct 730 TCAGC-ATCGTGGAGTCAAAGAAGTGACTGAGTGGATGTCTAAGACAAGTGGAATCCCGG 788
Query 511 TTTCTGACATCTGTCATCACCGGTTTCTGTTGTACAACAAAGACGCCACACAACATCTAT 570
|||| || |||||||| || || ||||| ||||||||||| || | ||| |||||| |||
Sbjct 789 TTTCAGAAATCTGTCAGCATCGTTTTCTATTGTACAACAAGGATGTCACGCAACATATAT 848
Query 571 TTCAAGTCTCCGCTGGTCTGGAATCTCTTGTCATAGGAGAAAATCAGATACAAT-CACAG 629
|| ||||||| |||||||| || ||||||||| |||| ||| |||||||| | |||||
Sbjct 849 TTGAAGTCTCAGCTGGTCTAGACTCTCTTGTCCTAGGTGAAGGTCAGATACT-TGCACAG 907
Query 630 GTTAAACAAGTTGAGAAAGTAGTTAAACAA--CAAGGGTTT-GGGAGGATTATCAGTGCG 686
||||||||||||| ||||||| | || | ||| ||||| ||||||| |||||||| |
Sbjct 908 GTTAAACAAGTTGTTAAAGTAGGTCAAGGAGTCAATGGTTTTGGGAGGAATATCAGTGGG 967
Query 687 CTATTTGAAA-AGGCAATCA-AGGCTGGAAAGCGTGTCAGAGA-AGAGACAAACATCGC- 742
|||||| ||| | ||||||| || |||||||||||||||| | ||||||||| |||||
Sbjct 968 CTATTT-AAACACGCAATCACAGT-TGGAAAGCGTGTCAGA-ACAGAGACAAATATCGCT 1024
Query 743 GTCTGGGGCTGTTTCCGTTAGCTCTGCTGCCA-TCGAACTTGCTCTCACT-AAGCTTCCA 800
| |||||||||||||||||||||| ||||| | | ||||||||||||| | ||||||||
Sbjct 1025 G-CTGGGGCTGTTTCCGTTAGCTCGGCTGC-AGTTGAACTTGCTCTCA-TGAAGCTTCCC 1081
Query 801 GGATCTG-T-AT-CATC-T--GCTATGATGTTGGTAATTGGTGCAGGAACGATGGGGAAG 854
| |||| | || |||| | |||| |||||||||| ||||||| |||| ||||||||||
Sbjct 1082 GAATCTTCTCATGCATCATCTGCTAGGATGTTGGTAGTTGGTGCTGGAAAGATGGGGAAG 1141
Query 855 CTTGTAATCAAGCACCTGGTTGCTAAAGGTTGCACTGAAATGGTGGTTATGAACCGAAGC 914
||||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||
Sbjct 1142 CTTGTAATCAAGCACTTGGTTGCTAAAGGTTGCACCAAAATGGTGGTTGTGAATCGAAGC 1201
Query 915 CAAGAGAAAGTTGCAGCTATCCGCGA-GAAGATGCCGCCTGGCGTTAAGATTATCTATAG 973
||||||||||||||||| ||||| | || |||||||||||||||| ||||||| ||||
Sbjct 1202 GAAGAGAAAGTTGCAGCTGTCCGCAATGA-GATGCCGCCTGGCGTTGAGATTATTTATAA 1260
Query 974 ACCC-TTAGATGAGATGCTAG-CTTGTGCTTCAGAAGCCAACGTAATCTTTACTAGCACA 1031
|||| || ||||||||||| | |||||||| ||||||| | ||| ||||||||||||||
Sbjct 1261 ACCCCTT-GATGAGATGCT-GTCTTGTGCTGCAGAAGCTGATGTAGTCTTTACTAGCACA 1318
Query 1032 GCATCTGAGACACCATTGTTCTTGAAGGAGCACGTAGAGA-TCCTCCCTCCTTGTCCTGC 1090
||||||||||||||||| |||||||||||||| ||||||| || |||||||| || |
Sbjct 1319 GCATCTGAGACACCATTATTCTTGAAGGAGCAAGTAGAGACTC-TCCCTCCT-GT--T-- 1372
Query 1091 AGATGTAGATGCGAGGCTCTTTGTTGATATCTCTGTTCCTAGAAATGTTGGCTCTTGTGT 1150
||| | | ||||||||||||||||||||||||||||||||||||||| || || || ||
Sbjct 1373 AGA-G-A--TGCGAGGCTCTTTGTTGATATCTCTGTTCCTAGAAATGTCGGGTCCTGCGT 1428
Query 1151 AGCTGAATTAGACAGTGCACGGGTTTACAACGTGGATGACCTCAAGGAAGTTGTTGCTGC 1210
|||||| ||||| || ||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 1429 CGCTGAAATAGACGGTACACGGGTTTTCAACGTGGATGACCTCAAGGAAGTCGTTGCTGC 1488
Query 1211 CAATATGGAAGACAGGGCGAGGAAAGCAATGGAAGCTCGGGATATAATAACAGAGGAGTC 1270
|||| |||||||||| ||||||||||||||| |||| || |||||| ||||| || ||
Sbjct 1489 GAATAAAGAAGACAGGGTGAGGAAAGCAATGGACGCTCAGGCTATAATTACAGATGAATC 1548
Query 1271 AATAA-AGTTTGAAGGGTGGAGGGATTCGATG-A--CGTTTCCAACAATCAAGAAATTAA 1326
|| || | ||||||| ||||||||| ||| || | || |||||||||||||||||||||
Sbjct 1549 AA-AACACTTTGAAGCGTGGAGGGACTCGTTGGAGACGGTTCCAACAATCAAGAAATTAA 1607
Query 1327 GAAGCAAA-ACAGAGAAAATCAGAGCTGCTGCTG-TTGAAAAATTCATGTCGAAATATGG 1384
| | | | ||||||| ||| | |||||| | | |||| |||| | || | ||| ||||
Sbjct 1608 GGGG-ATATACAGAGAGAATTATAGCTGCAGA-GATTGAGAAATCCTTGCCCAAA-ATGG 1664
Query 1385 -CAAAGACATGGACAAGAAGACGAGGGAAGCAGTAGA-GAATGTAACCCTAGAG-ATAGT 1441
|| |||||| ||||||||| |||| || ||||||| || | ||| || || | |||||
Sbjct 1665 GCATTGACATGAACAAGAAGATGAGGAAAACAGTAGATGA-TCTAATCCGAG-GTATAGT 1722
Query 1442 GAACAGGATCCTGCACGACCCAATGAAACATTTGAGATGCGATGGGA-CTGATAGCAGAA 1500
||||| | ||||||||| |||||| | ||||||||||||||||||| | ||||||||||
Sbjct 1723 GAACAAGCTCCTGCACGGTCCAATGCAGCATTTGAGATGCGATGGGAAC-GATAGCAGAA 1781
Query 1501 TGCTGCA-TGAGACTCTAGAGAACATGCAGGCTGTGAACAGAATGTATGAACTCGACGCA 1559
|||| | |||||| ||||| |||||||||||| ||||||| ||||||| ||| || |||
Sbjct 1782 CGCTG-AGTGAGACACTAGATAACATGCAGGCTCTGAACAGGATGTATGGACTTGATGCA 1840
Query 1560 GAGTTACTCGAGGAGAAGATTAGAGCAAAAAAGAGGGAACAAAAGTagagagagagagag 1619
||| ||||||||||||||||||||||||| | || || ||||||||||||| ||||||
Sbjct 1841 GAGATACTCGAGGAGAAGATTAGAGCAAAG--GTGGAAA-AAAAGTAGAGAGA-AGAGAG 1896
> AT1G58290.1 | Symbols: HEMA1 | Glutamyl-tRNA reductase family
protein | chr1:21623726-21626200 REVERSE LENGTH=2083
Length=2083
Score = 852 bits (461), Expect = 0.0
Identities = 1055/1334 (79%), Gaps = 71/1334 (5%)
Strand=Plus/Plus
Query 253 GATACACAAGGGAGAGAAGCAGCATTGTGGTGATTGGGCTTAGCTA-TCACAAAGCTACT 311
|||| |||| ||| |||||||| ||||| |||||||| ||||| || ||||| |||| ||
Sbjct 415 GATATACAAAGGAAAGAAGCAGTATTGTTGTGATTGGACTTAG-TATTCACACAGCTCCT 473
Query 312 CTAGAGATGCGTGAGAAGCTTGCCATTCCTGAAGCTGAATGGCCACGAGCTATTACTCAG 371
| |||||||||||||||||||| || |||||||||||||||||| |||||||| || |
Sbjct 474 GTTGAGATGCGTGAGAAGCTTGCTATACCTGAAGCTGAATGGCCAAGAGCTATTGCTGAA 533
Query 372 TTGTGCGCTTTGAATCACATTGAAGAAGCTGCTGTTCTCAGTACCTGCAACCGTATCGAG 431
||||| | ||||||||| ||||||||||||||||| || ||||| || |||||||| |||
Sbjct 534 TTGTGTGGTTTGAATCATATTGAAGAAGCTGCTGTGCTTAGTACTTGTAACCGTATGGAG 593
Query 432 ATTTATGTTTCCGCTCTT-TCTC-GCCACCGTGGTGTCAAAGAAGTCACTGACTGGATGT 489
|||||||||| ||| || |||| | || ||||| || |||||||| ||||| |||||||
Sbjct 594 ATTTATGTTTTAGCT-TTATCTCAG-CATCGTGGAGTTAAAGAAGTTACTGAATGGATGT 651
Query 490 CTAAGA-GAAGTGGAATTCCAGTTTCTGACATCTGTCATCACCGGTTTCTGTTGTACAAC 548
| |||| | ||||| || |||||||| || || ||||| ||||| |||||||||||||||
Sbjct 652 CAAAGACG-AGTGGGATCCCAGTTTCAGAGATTTGTCAACACCGTTTTCTGTTGTACAAC 710
Query 549 AAAGACGCCACACAACATCTATTTCAAGTCTCCGCTGGTCTGGAATCTCTTGTCATAGGA 608
|| || || ||||| ||| ||||| ||||||| |||||||| || ||||||||| |||||
Sbjct 711 AAGGATGCTACACAGCATATATTTGAAGTCTCAGCTGGTCTTGACTCTCTTGTCCTAGGA 770
Query 609 GAAAATCAGATACAAT-CACAGGTTAAACAAGTTGAGAAAG-TAGTTAAACA-ACAA-GG 664
||| |||||| | | ||||||| |||||||||| ||||| | || || | || ||
Sbjct 771 GAAGGTCAGAT-CCTTGCACAGGTGAAACAAGTTGTGAAAGTTGGTCAAGGAGTGAATGG 829
Query 665 GTTTGGGAGGATTATCAGTGCGCTATTTGAAA-AGGCAATCAA-GGCTGGAAAGCGTGTC 722
|||||||||| |||||| | ||| ||| ||| | || || || | ||| ||||||||
Sbjct 830 CTTTGGGAGGAATATCAGCGGGCTGTTT-AAACACGCGAT-AACTGTTGGTAAGCGTGTT 887
Query 723 AGAGA-AGAGACAAACATCGCGTCTGGGGCTGTTTCCGTTAGCTCTGCTGCCATCGAACT 781
||| | ||||||||| || || ||||| || ||||| |||||||| ||||| | |||||
Sbjct 888 AGA-ACAGAGACAAATATTGCTTCTGGTGCGGTTTCGGTTAGCTCAGCTGCTGTTGAACT 946
Query 782 TGCTCTCACT-AAGCTTCCAGGA-TC-TGTATC--ATCTGCTATGATGTTG-GTAATTGG 835
|||||| | | |||||||| | | || | | | |||||||| |||| || ||||||||
Sbjct 947 TGCTCTGA-TGAAGCTTCC-GCAGTCTTCAAACGTATCTGCTAGGATG-TGTGTAATTGG 1003
Query 836 TGCAGGAACGATGGGGAAGCTTGTAATCAAGCACCTGGTTGCTAAAGGTTGCACTGAAA- 894
|| |||| |||||||||||||| || ||||| || | ||||| |||||||| |||
Sbjct 1004 CGCTGGAAAAATGGGGAAGCTTGTGATTAAGCATTTGATGGCTAAGGGTTGCAC-AAAAG 1062
Query 895 TGGTGGTTA-TGAACCGAAGCCAAGAGAAAGTTGCAGCTATCCGCGAGAAGATGCCGCCT 953
|||||| || | ||| |||| |||||| ||| |||||||||| ||| |||| ||||
Sbjct 1063 TGGTGG-TAGTCAACAGAAGTGAAGAGAGGGTTTCAGCTATCCGTGAGGAGAT---GCCT 1118
Query 954 GGCGTTAAGATTATCTATAGACC-CTTAGATGAGATGCTAGCTTGTGCTTCAGAAGCCAA 1012
|| || ||||||| ||| |||| ||| ||||||||||||||||||||||||||||| |
Sbjct 1119 GGTATTGAGATTATATATCGACCTCTT-GATGAGATGCTAGCTTGTGCTTCAGAAGCGGA 1177
Query 1013 CGTAATCTTTACTAGCACAGCATCTGAGACACCATTGTTCTTGAAGGAGCACGTAGAGA- 1071
|| | ||||| |||||||| |||||||| ||||||||||| |||||||| |||||||
Sbjct 1178 TGTTGTGTTTACCAGCACAGCCTCTGAGACGCCATTGTTCTTAAAGGAGCATGTAGAGAA 1237
Query 1072 TCCTCCCTCCTTG-TCCTGCAGATGTAG-ATG-C-GAGGC-TCTTTGTTGATATCTCTGT 1126
|| |||||| | | || |||| || | | | | ||||| | |||||||| ||||||||
Sbjct 1238 TC-TCCCTCAA-GCTTCTCCAGAGGTTGGAGGACTGAGGCAT-TTTGTTGACATCTCTGT 1294
Query 1127 TCCTAGAAATGTTGGCTCTTGTGTAGCTGAATTAGACAGTGCACGGGTTTACAACGTGGA 1186
||| ||||||||||| |||||||| | |||| |||| | |||||||||||||| |||||
Sbjct 1295 TCCGAGAAATGTTGGATCTTGTGTTGGTGAAGTAGAAACAGCACGGGTTTACAATGTGGA 1354
Query 1187 TGACCTCAAGGAAGTTGTTGCTGCCAATATGGAAGACAGGGCGAGGAAAGCAATGGAAGC 1246
|| ||||| ||||||||||||||||| | ||||||||| ||||||||||||||||||
Sbjct 1355 CGATCTCAAAGAAGTTGTTGCTGCCAACAAAGAAGACAGGATGAGGAAAGCAATGGAAGC 1414
Query 1247 TCGGGAT-ATAATAACAGAGGAGTCAATAAAGTTTGAAGGGTGGAGGGATTCGAT-G-A- 1302
|| | ||||| |||||||| || | | ||||||||| ||||||||||| || | |
Sbjct 1415 TCAA-ACCATAATCACAGAGGAATCCACACAGTTTGAAGCATGGAGGGATTC-ATTGGAG 1472
Query 1303 -CGTTTCCAACAATCAAGAAATTAAGAAGCAAAA-CAGAGAAAATCAGAGCTG-CTGCTG 1359
|| ||||||| |||||||| |||||| || | |||||| |||||||| || | | |
Sbjct 1473 ACGGTTCCAACGATCAAGAAGTTAAGA-GCTTATGCAGAGAGAATCAGAG-TGGCAGA-G 1529
Query 1360 TT-GAAAAATTCATGTCGAAATATGGCAAA-GACATGGACAAGAAGACGAGG-GAAGCAG 1416
| || || | |||||| ||| |||| | | || || ||||||| || | | || || |
Sbjct 1530 CTCGAGAAGTGCATGTCCAAA-ATGGGAGATGATATCAACAAGAAAACAACGAGA-GCGG 1587
Query 1417 TAGA-GAATGTAACCCTAGAG-ATAGTGAACAGGATCCTG-CACGACCCAATGAAACATT 1473
| || || | ||| || || | || |||||||| || || || | |||||| | ||||
Sbjct 1588 TTGATGACT-TAAGCCGAG-GTATCGTGAACAG-ATTCTTACATGGTCCAATGCAGCATT 1644
Query 1474 TGAGATGCGATGGGACTGATAGCAGAATGCTGCAT-GAGACTCTAGAGAACATGCAGGCT 1532
||||||| || || | ||| || |||| |||| | ||||| || ||||| ||||| |||
Sbjct 1645 TGAGATGTGACGGAAGTGACAGTAGAACGCTG-AGCGAGACCCTTGAGAATATGCATGCT 1703
Query 1533 GTGAACAGAATGTA 1546
|||||||||||||
Sbjct 1704 TTGAACAGAATGTA 1717
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80521674180
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5