BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933699
Length=1726
Score E
Sequences producing significant alignments: (Bits) Value
AT2G31510.1 | Symbols: ARI7, ATARI7 | IBR domain-containing pro... 2868 0.0
AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein | ... 1365 0.0
AT1G63760.1 | Symbols: ARI6, ATARI6 | pseudogene, ARI protein, ... 1171 0.0
> AT2G31510.1 | Symbols: ARI7, ATARI7 | IBR domain-containing protein
| chr2:13416646-13421170 REVERSE LENGTH=2034
Length=2034
Score = 2868 bits (1553), Expect = 0.0
Identities = 1647/1693 (97%), Gaps = 3/1693 (0%)
Strand=Plus/Plus
Query 21 ATGGATTCTGAAGAAGATATGCTCGATGCACACGATATGGAGTCTGGTGAGGATGATTTC 80
||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1 ATGGATTCTGAAGAAGACATGCTCGATGCGCACGATATGGAGTCTGGAGAGGATGATTTC 60
Query 81 TATAGCGGTGGAACTGATGATTGTAATGATAGTGATGATGGTGAACCCGATTATGGGTTT 140
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 61 TACAGCGGTGGAACTGATGATTGTAATGATAGTGATGATGGTGAACCTGATTATGGGTTT 120
Query 141 GTTGAGGAAGATGCTGATGATTCTGCCATGATCGCCTCTCATCGCTCTCAGAAAAACTTT 200
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 121 GTTGAGGAAGATGCTGATGATTCTGCTATGATCGCCTCTCATCGCTCTCAGAAAAACTTT 180
Query 201 TGTGCTCTGAGGGAAGAAGATATTCGCAGGCACCAGATGGATGATATTGAACGAGTTTCC 260
|||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 181 TGTGTTCTGAGGGAAGAAGATATTCGCAGGCATCAGATGGATAATATTGAACGAGTTTCC 240
Query 261 GTTGTCCTCTCGATAACTGAGGTCGAAGCGAGTATTCTGCTTCGTCATTTTCACTGGAGT 320
||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct 241 GTTGTTCTCTCGATAACTGAGGTTGAAGCGAGTATTCTACTTCGTCACTTTCACTGGAGT 300
Query 321 GTCGGTAGAGTTCATGATGAGTGGTTTGCTGATGAAGAGAGAGTTCGGAAGACTGTTGGC 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GTCGGTAGAGTTCATGATGAGTGGTTTGCTGATGAAGAGAGAGTTCGGAAGACTGTTGGC 360
Query 381 ATATTGGAGAGTCCTGTTGTTCCACCATCTGATGACAGTGAACTTACATGTGGAATCTGT 440
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 ATATTGGAGAGTCATGTTGTTCCACCATCTGATGACAGTGAACTTACATGTGGAATCTGT 420
Query 441 TTCGATTCGTACCCTCCTGAGAAAATCGCTTCAGTTTCTTGTGGCCATCCTTTCTGCACT 500
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 TTCGATTCCTACCCTCCTGAGAAAATCGCTTCAGTTTCTTGTGGCCATCCTTTCTGCACT 480
Query 501 ACATGCTGGACAGGTTATATCACCACAACCATTAATGATGGTCCGGGATGTTTGATGCTA 560
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 481 ACATGCTGGACAGGTTATATCAGCACAACCATTAATGATGGCCCGGGATGTTTGATGCTA 540
Query 561 AGATGTCCTGATCCATCTTGTCTTGCTGCTGTTGGTCATGATATGGTTGACAAATTAGCG 620
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 AGATGTCCTGACCCATCTTGTCTTGCTGCTGTTGGTCATGATATGGTTGACAAATTAGCG 600
Query 621 TCTGAAGA-G--AAGGAGAAGTACAACAGATATTTTCTTAGGTCTTATATTGAAGACAAC 677
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 TCTGAAGACGAAAAGGAGAAGTACAACAGATATTTTCTTAGGTCTTATATTGAAGACAAC 660
Query 678 AGAAAGATGAAGTGGTGTCCTGCCCCGGGATGTGATTATGCGATTGATTTTGTTGCAGGG 737
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 661 AGAAAGATGAAGTGGTGTCCTGCCCCGGGATGTGATTTTGCGATTGATTTTGTTGCAGGG 720
Query 738 TCTGGAAATTATGATGTTTCCTGCTTGTGCTCGTTTAGCTTTTGCTGGAATTGCACTGAG 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 TCTGGAAATTATGATGTTTCCTGCTTGTGCTCGTTTAGCTTTTGCTGGAATTGCACTGAG 780
Query 798 GAGGCTCACCGACCTGTGGATTGTAGCACAGTTTCAAAATGGATTTTGAAGAACAGCGCT 857
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 781 GAGGCTCACCGACCTGTGGATTGTAGCACAGTTTCAAAATGGATATTAAAGAACAGCGCT 840
Query 858 GAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAGATGTAAGCGG 917
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 841 GAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCGAGATGTAAGAGG 900
Query 918 CCAATTGAAAAGAATCAGGGCTGTATGCACATGACATGCACACCGCCTTGTAAATATGAA 977
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 901 CCAATTGAAAAGAATCAGGGCTGTATGCACATGACATGTACACCGCCTTGTAAATATGAA 960
Query 978 TTTTGTTGGCTATGTCTTGGTGCATGGATGGATCATGGGGAAAGAACTGGTGGTTTTTAT 1037
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 961 TTTTGTTGGCTATGTCTTGGTGCATGGATGGATCACGGGGAAAGAACTGGTGGTTTTTAT 1020
Query 1038 GCTTGTAACCGGTACGAGGTGGCCAAGCAAGAAGGACAGTATGATGAGACAGAAAGGAGG 1097
||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1021 GCTTGTAACCGTTATGAGGTGGCCAAGCAAGAAGGACAGTATGATGAGACAGAGAGGAGG 1080
Query 1098 AGAGAGATGGCCAAAAATTCACTAGAGAGATACACACATTATTATGAACGCTGGGCAAGC 1157
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1081 AGAGAGATGGCCAAAAATTCGCTAGAGAGATACACACACTATTATGAACGCTGGGCAAGC 1140
Query 1158 AATCAAACGTCGAGGCAAAAGGCTATGGCAGATCTGCAGCAAGCGCAGACGCAGAATCTT 1217
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 1141 AATCAAACGTCGAGGCAAAAGGCTATGGCTGATCTGCAGCAAGCGCAGATGCAGAATCTT 1200
Query 1218 GAGAAGCTTAGTGATAAACAGTGCACACCAGAATCTCAGCTCAAATTCATTTTAGAAGCT 1277
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1201 GAGAAGCTTAGTGATAAACAGTGCACACCAGAGTCTCAGCTCAAATTCATTTTAGAAGCT 1260
Query 1278 TGGCTTCAGATCATCGAATGTAGGCGAGTCTTGAAATGGACTTATGCATATGGATACTAC 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 TGGCTTCAGATCATCGAATGTAGGCGAGTCTTGAAATGGACTTATGCATATGGATACTAC 1320
Query 1338 CTACCTGATCATGAACATGCCAAACGACAATTTTTCGAGTATTTGCAAGGGGAAGCTGAG 1397
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1321 CTACCTGAGCATGAACATGCCAAACGACAATTTTTCGAGTATTTGCAAGGTGAAGCTGAG 1380
Query 1398 TCAGGTTTAGAGAGGCTCCATCAATGCGTAGAGAAGGACTTGGCTCAGTTTCTCAATGCA 1457
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||
Sbjct 1381 TCAGGTTTAGAGAGGCTCCATCAATGCGTAGAGAAAGACTTGGTTCAGTTTCTCATTGCG 1440
Query 1458 GAAGGCCCATCAAAAGATTTCAATGATTTCCGGACAAAACTAGCTGGTTTGACCAGCGTG 1517
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 GAAGGTCCATCAAAAGATTTCAATGATTTCCGGACAAAACTAGCTGGTTTGACCAGCGTG 1500
Query 1518 ACGAAAAACTACTTTGAGAATTTGGTGAAAGCTCTGGAGAACGGTCTTGCTGATGTAGAC 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 ACGAAAAACTACTTTGAGAATTTGGTGAAAGCTCTGGAGAACGGTCTTGCTGATGTAGAC 1560
Query 1578 TCACATGCGGCTTGCAGCAGCAAATCAACAAGCTCCAAATCAACAGCTTGCAGTAGCAAA 1637
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 1561 TCACATGCGGCTTGCAGCAGCAAATCAACAAGCTCTAAATCAACAGGTTGCAGTAGCAAA 1620
Query 1638 ACAAGAGGTAAAGGCAAAGGAAGTTCCAGAACTGGTGGATCCAGCAGAAACCCAGATGAC 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 ACAAGAGGTAAAGGCAAAGGAAGTTCCAGAACTGGTGGATCCAGCAGAAACCCAGATGAC 1680
Query 1698 AACTTATAAGAAT 1710
||||||||| |||
Sbjct 1681 AACTTATAATAAT 1693
> AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein
| chr1:1779256-1784427 FORWARD LENGTH=2421
Length=2421
Score = 1365 bits (739), Expect = 0.0
Identities = 1265/1513 (84%), Gaps = 59/1513 (4%)
Strand=Plus/Plus
Query 212 GGAAGAAGATATTCGCAGGCACCAGATGGATGATATTGAACGAGTTTCCGTTGTCCTCTC 271
||||||||||||||||||||| |||| |||||| ||| |||||||||| ||||||||
Sbjct 678 GGAAGAAGATATTCGCAGGCATCAGAACGATGATGTTGGGCGAGTTTCCGCGGTCCTCTC 737
Query 272 GATAACTGAGGTCGAAGCGAGTA-TTCTGCTTCGTCATTTTCACTGGAGTGTCGGTAGAG 330
||||| || |||||||| |||| || |||||| ||| | ||||||||||||| ||| ||
Sbjct 738 CATAACCGATGTCGAAGCAAGTACTT-TGCTTCTTCACTATCACTGGAGTGTCAGTAAAG 796
Query 331 TTCATGATGAGTGGTTTGCTGATGAAGAGAGAGTTCGGAAG-ACTGTTGGCATATTGGAG 389
|| ||||||| |||||||| ||||| |||||||||| | || |||||||||||||| |||
Sbjct 797 TTAATGATGAATGGTTTGCGGATGAGGAGAGAGTTC-GCAGAACTGTTGGCATATTAGAG 855
Query 390 AGTCCTGTTGTTCCACCATCTGATGACAGTGAACTTACATGTGGAATCTG-TTTCGATTC 448
| ||||||||| || || |||||| ||| ||| ||||||||||||| || ||| |||||
Sbjct 856 GGACCTGTTGTTACAACACCTGATGGCAGAGAATTTACATGTGGAATATGCTTT-GATTC 914
Query 449 GTACCCTCCTGAGAAAATCGCT-TCAGTTTCTTGTGGCCATCCTTTCTGCACTACATGCT 507
||| ||| |||| |||| | | || ||||||||||| |||||||||||| ||||||| |
Sbjct 915 CTACACTCTTGAGGAAATTG-TATCGGTTTCTTGTGGTCATCCTTTCTGCGCTACATGTT 973
Query 508 GGACAGGTTATATCACCACAACCATTAATGATGGTCCGGGATGTTTGATGCTAAGATGTC 567
||||||||||||| | ||||||||| |||||||| || || ||||||||||||| |||||
Sbjct 974 GGACAGGTTATATAAGCACAACCATCAATGATGGCCCAGGCTGTTTGATGCTAAAATGTC 1033
Query 568 CTGATCCATCTTGTCTTGCTGCTGTTGGTC-ATGATATGGTTGACAAATTAGCGTCT--- 623
| || || ||||||| ||||||| |||||| | |||||| | || || || || |||
Sbjct 1034 CCGACCCTTCTTGTCCTGCTGCTATTGGTCGA-GATATGATCGATAAGTTGGCTTCTAAG 1092
Query 624 GAAGAGAAGGAGAAGTACAACAGATATTTTCTTAGGTCTTATATTGAAGACAACAGAAAG 683
||||| ||||||||||| | |||||||||||||| |||||| | |||| ||||||| ||
Sbjct 1093 GAAGACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGTCGAAGTCAACAGAGAG 1152
Query 684 ATGAAGTGGTGTCCTGCCCCGGGATGTGATTATGCGATTGATTTTGTTGCAGGGTCTGGA 743
|||||||||||||||||||| |||||||| |||| |||||||||| || ||| | ||
Sbjct 1153 ATGAAGTGGTGTCCTGCCCCAGGATGTGAACATGCAATTGATTTTGCTGGTGGGAC-CGA 1211
Query 744 AA-TTATGATGTTTCCTGCTTGTGCTCGTTTAGCTTTTGCTGGAATTGCACTGAGGAGGC 802
|| |||||||||||| |||||||| ||| |||||||||||||||||||||||| |||||
Sbjct 1212 AAGTTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAATTGCACTGAAGAGGC 1271
Query 803 TCACCGACCTGTGGATTGTAG-CACAGTTTCAAAATGGATTTTGAAGAACAGCGCTGAAT 861
|||||| |||||||||||| | ||||||| ||||||||| | ||||||||||||||||
Sbjct 1272 TCACCGTCCTGTGGATTGT-GACACAGTTGGAAAATGGATACTAAAGAACAGCGCTGAAT 1330
Query 862 CTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAA-GATGTAAGCGGCCA 920
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 1331 CTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAAG-TGTAAGCGGCCA 1389
Query 921 ATTGAAAAGAATCAGGGCTGTATGCACATGACATGCACACCGCCTTGTAAATATGAATTT 980
|||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| |||
Sbjct 1390 ATTGAAAAGAATCATGGCTGTATGCACATGACATGCACACCACCTTGTAAATTTGAGTTT 1449
Query 981 TGTTGGCTATGTCTTGGTGCATGGATGGATCATGGGGAAAGAACTGGTGGTTTTTATGCT 1040
|||||||| || ||| ||||||| || || ||||||||||||||||| ||||||||
Sbjct 1450 TGTTGGCTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACTGGTGGATTTTATGCC 1509
Query 1041 TGTAACCGGTACGAGGTGGCCAAGCAAGAAGGACAGTATGATGAGACAGAAAGGAGGAGA 1100
|| |||||||| |||| ||| ||||||||||| |||||||||| | ||||||||| ||
Sbjct 1510 TGCAACCGGTATGAGGCGGCTAAGCAAGAAGGGTTGTATGATGAGGCTGAAAGGAGGCGA 1569
Query 1101 GAGATGGCCAAAAATTCACTAGAGAGATACACACATTATTATGAACGCTGGGCAAGCAAT 1160
|||||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||
Sbjct 1570 GAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAACGCTGGGCAAGCAAT 1629
Query 1161 CAAACGTCGAGGCAAAAGGCTATGGCAGATCTGCAGCAAGCGCAGA-C-GCAGAATCTTG 1218
||| |||||||||||| ||||||| ||||||||| || ||| | | | |||| ||||
Sbjct 1630 CAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCA-ATCAG-AGAAGCTTG 1687
Query 1219 AGAAGCTTAGTGATAAACAGTGCACACCAGAATCTCAGCTCAAATTCATTTTAGAAGCTT 1278
|||||||||||| | |||||||||||||||||||||||||| || || ||| ||||
Sbjct 1688 GGAAGCTTAGTGACATTCAGTGCACACCAGAATCTCAGCTCAAGTTTATCGCAGAGGCTT 1747
Query 1279 GGCTTCAGATCATCGAATGTAGGCGAGT-CTTGAAATGGACTTATGCATATGGATACTAC 1337
|||| |||||||| ||||| || || || || ||||||||| |||||||||||||||||
Sbjct 1748 GGCTCCAGATCATTGAATGCAGACGGGTACT-GAAATGGACATATGCATATGGATACTAT 1806
Query 1338 CTACCTGATCATGA-ACATGCCAAACGACAATTTTTCGAGTATTTGCAAGGGGAAGCTGA 1396
|||| ||||||| | | | |||| || ||||| ||||||||||||||||| |||||
Sbjct 1807 CTACAAGATCATGCTA-A-G--AAAC--CATTTTTT-GAGTATTTGCAAGGGGAGGCTGA 1859
Query 1397 GTCAGGTTTAGAGAGGCTCCATCAA-TGCGTAGAGAAGGACT-T-G-GCTCAGTTTCTCA 1452
||||||||| ||||||||||| ||| |||||||||||||| | | | | | |||| |
Sbjct 1860 GTCAGGTTTGGAGAGGCTCCA-CAAATGCGTAGAGAAGGA-TATAGAGGT--GTTTG--A 1913
Query 1453 A-T-GCAGAAGGCCCATCAAAAGATTTCAATGATTTCCGGACAAAACTAGCTGGTTTGAC 1510
| | || || ||||| ||| | || |||||| |||||||||||||| || ||||||| ||
Sbjct 1914 ACTTGCTGAGGGCCCTTCAGAGGAATTCAATCATTTCCGGACAAAATTAACTGGTTTAAC 1973
Query 1511 CAGCGTGACGAAAAAC-TACTTTGAGAATTTGGTGAAAGCTCTGGAGAACGGTCTTGCTG 1569
|||| | || |||||| | |||||| ||| ||||||||||||||||||| ||||||||||
Sbjct 1974 CAGCATAAC-AAAAACCTTCTTTGAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTG 2032
Query 1570 ATGTAGACTCACATGCGGCTTGCAGCAGCAAATCAAC-AAGCTCCAAATCAACAGCTTGC 1628
|||| || ||||| || ||| ||||||||| || | || ||| ||| | | || ||
Sbjct 2033 ATGTGGATTCACAAGCTGCT---AGCAGCAAACCAGCTAA-CTCTAAA-C--CTTCTAGC 2085
Query 1629 A-GTAGCAAAACAAGA-GGTAAAGGCAAAGGAAGTTCCAGAACTGGTGGATCCAGCAGAA 1686
| | | ||||| | || ||||| |||||||| |||| || ||| || ||||||||||
Sbjct 2086 AAG-A-CAAAAGGCGGTGGGAAAGGTAAAGGAAGCTCCAAAAATGGCGGGTCCAGCAGAA 2143
Query 1687 ACCCAGATGACAA 1699
||||||||| |||
Sbjct 2144 ACCCAGATGGCAA 2156
> AT1G63760.1 | Symbols: ARI6, ATARI6 | pseudogene, ARI protein,
similar to ARI protein (A Drosophila RING Finger Motif Involved
in Axonal Path-finding in the Central Nervous System)
GB:CAA66953 (Drosophila melanogaster); blastp match of 86% identity
and 5.3e-235 P-value to GP|6850317|gb|AAF29394.1|AC009999_14|AC009999
Contains similarity to Ariadne-2 protein from
Drosophila melanogaster gb|AJ010169 and contains an IBR
PF|01485 and a zf-C3HC4 (RING finger) PF|00097 domain. ESTs
gb|AA585849, gb|T42014 come from this gene. -TRUNCATED- | chr1:23655713-23657612
FORWARD LENGTH=1900
Length=1900
Score = 1171 bits (634), Expect = 0.0
Identities = 1295/1607 (81%), Gaps = 74/1607 (5%)
Strand=Plus/Plus
Query 21 ATGGATTCTGAAGAAGATATGCTCGATGCACACGATATGGAGTCTGGT-GAGGATGATTT 79
|||||||| || || |||||||||||||| ||||||||||| || ||| || |||||||
Sbjct 4 ATGGATTCCGATGATGATATGCTCGATGCCCACGATATGGACTC-GGTAGATTATGATTT 62
Query 80 CT-ATAGCGGTGGAACTGATGATTG-TAATGATAGTGATGATGGTGAACCCGATTATGGG 137
| | ||||| || || ||||| || || |||| | ||| |||| | ||||| | |
Sbjct 63 -TGACAGCGGCGGCACCGATGA-TGACAACGATA-T--TGA---TGAAACTGATTACGTG 114
Query 138 TTTGTTGAGGAAGATGCTGATGATTCTGCCATGATCGCCT-CTCATCGCTCTCAGAAAAA 196
|||| ||||| || | || ||| | ||||| ||||||| | ||||||||||||| |||
Sbjct 115 TTTGGTGAGGCTGACACGGACGATGCCGCCATCATCGCCTAC-CATCGCTCTCAGATAAA 173
Query 197 CTTTTG-TGCTCTGAGGGAAGAAGATATTCGCAGGCACCAGATGGATGATATTGAACGAG 255
|| || || ||| | ||||||||||||||||||||| |||| |||||| ||| ||||
Sbjct 174 -TTATGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAAGGATGACGTTGGGCGAG 232
Query 256 TTTCCGTTGTCCTCTCGATAACTGAGGTCGAAGCGAGTATTCTGCTTCGTCATTTTCACT 315
|||||||||||||||| ||||| || ||| |||| ||| || |||||| ||| | |||||
Sbjct 233 TTTCCGTTGTCCTCTCCATAACCGATGTCCAAGCAAGTCTTTTGCTTCTTCACTATCACT 292
Query 316 GGAGTGTCGGTAGAGTTCATGATGAGTGGTTTGCTGATGAAGAGAGAGTTCGGAAG-ACT 374
|||||||| ||| |||| ||||||| |||||||| ||||| || ||||||| | || |||
Sbjct 293 GGAGTGTCAGTAAAGTTAATGATGAATGGTTTGCGGATGAGGACAGAGTTC-GTAGAACT 351
Query 375 GTTGGCATATTGGAGAGTCCTGTTGTTCCACCATCTGATGACAGTGAACTTACATGTGGA 434
||||||||||| ||| | || || || | |||||| ||| || |||||||||||
Sbjct 352 GTTGGCATATTAGAGGGACC---TG---CA-C--CTGATGGCAGAGAGTTTACATGTGGA 402
Query 435 ATCTG-TTTCGATTCGTACCCTCCTGAGAAAATCGCT-TCAGTTTCTTGTGGCCATCCTT 492
|| || ||| || || ||||||| |||| ||| | | || ||||||||||| || || |
Sbjct 403 ATATGCTTT-GAATCCTACCCTCTTGAGGAAA-CTATATCGGTTTCTTGTGGTCACCCAT 460
Query 493 TCTGCACTACATGCTGGACAGGTTATATCACCACAACCATTAATGATGGTCCGGGATGTT 552
||||| ||||||| ||||| |||||||| | ||||| ||| |||||||| || |||||||
Sbjct 461 TCTGCGCTACATGTTGGACGGGTTATATAAGCACAAGCATCAATGATGGCCCAGGATGTT 520
Query 553 TGATGCTAAGATGT-CCTGATCCATCTTGTCTTGCTGCTGTTGGTC-ATGATATGGTTGA 610
||||||||| |||| ||| | || | ||||| ||| || |||||| | |||||| | ||
Sbjct 521 TGATGCTAAAATGTCCCT-ACCCTTGTTGTCCTGCGGCCATTGGTCGA-GATATGATCGA 578
Query 611 CAAATTAGCG-T-C--TGAAGAGAAGGAGAAGTACAACAGATATTTTCTTAGGTCTTATA 666
|| || | | | | ||||| ||| ||| ||| | |||||||||||||||||||||
Sbjct 579 TAACTT-GTGTTCCAAGGAAGACAAGTAGAGGTATTATAGATATTTTCTTAGGTCTTATG 637
Query 667 TTGAAGACAACAGAAAGATGAAGTGGTGTCCTGCCCCGGGATGTGATTATGCGATTGA-T 725
|||||| ||||||| |||||||||| ||||||||||| |||||||| |||| ||| | |
Sbjct 638 TTGAAGTCAACAGAGAGATGAAGTGCTGTCCTGCCCCAGGATGTGAGCATGCAATT-AGT 696
Query 726 TTTGTTGCAGGGTCTG---GAAATTATGATGTTTCCTGCTTGTGCTCGTTTAGCTTTTGC 782
|||| ||| ||| | | | |||||||||||||| |||||||| ||| ||||||||||
Sbjct 697 TTTGCTGCTGGGACCGAAAGTAATTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGC 756
Query 783 TGGAATTGCACTGAGGAGGCTCACCGACCTGTGGATTGTAG-CACAGTTTCAAAATGGAT 841
|||||||||| ||| ||||||||||| |||||||||||| | ||||||| |||||||||
Sbjct 757 TGGAATTGCAGTGAAGAGGCTCACCGTCCTGTGGATTGT-GACACAGTTGGAAAATGGAT 815
Query 842 TTTGAAGAACAGCGCTGAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTG 901
| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 816 ACTAAAGAACAGCACTGAATCTGAAAATATGAATTGGATACTTGCCAATTCGAAGCCTTG 875
Query 902 TCCAA-GATGTAAGCGGCCAATTGAAAAGAATCAGGGCTGTATGCACATGACATGCACAC 960
||||| | |||||| ||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct 876 TCCAAAG-TGTAAGAGGCCAATAGAAAAGAATCATGGATGTATGCACATGACATGCACAC 934
Query 961 CGCCTTGTAAATATGAATTTTGTTGGCTATGTCTTGGTGCATGGATGGATCATGGGGAAA 1020
| |||||||| | ||| ||||||||||| || ||| ||||||| || || |||||||
Sbjct 935 CACCTTGTAAGTTTGAGTTTTGTTGGCTCTGCCTTAACGCATGGACAGAACACGGGGAAA 994
Query 1021 GAACTGGTGGTTTTTATGCTTGTAACCGGTACGAGGTGGCCAAGCAAGAAGGACAGTATG 1080
| | |||||| | |||||| || |||||||| |||| ||| ||| || |||| |||||
Sbjct 995 GTAGTGGTGGGTATTATGCCTGCAACCGGTATGAGGCGGCTAAGAAACAAGGGTTGTATG 1054
Query 1081 ATGAGACAGAAAGGAGGAGAGAGATGGCCAAAAATTCACTAGAGAGATACACACATTATT 1140
||||| | ||||||||| |||||||||| ||||| || ||||||| |||||| ||||| |
Sbjct 1055 ATGAGGCTGAAAGGAGGCGAGAGATGGCAAAAAACTCGCTAGAGAAATACACTCATTACT 1114
Query 1141 ATGAACGCTGGGCAAGCAATCAAACGTCGAGGCAAAAGGCTATGGCAGATCTGCAGCAAG 1200
|| |||| ||||||||||||||| |||||||||||| ||||||| ||||||||| ||
Sbjct 1115 ATAAACGATGGGCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAA 1174
Query 1201 CGCAGA-C-GCAGAATCTTGAG-AAGCTTAGTGATAAACAGTGCACACCAGAATCTCAGC 1257
||| | | | |||| ||| || ||||||||||| | |||||||||| ||||||||||||
Sbjct 1175 TGCA-ATCAG-AGAAGCTT-AGGAAGCTTAGTGACATACAGTGCACATCAGAATCTCAGC 1231
Query 1258 TCAAATTCATTTTAGAAGCTTGGCTTCAGATCATCGAATGTAGGCGAGT-CTTGAAATGG 1316
|||| || || ||| |||||||| |||||||| ||||| || || || || ||||||
Sbjct 1232 TCAAGTTTATCGCAGAGGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTC-AAATGG 1290
Query 1317 ACTTATGCATATGGATACTACCTACCTGATCATGAACATGCCAA-ACGACAATTTTTCGA 1375
|| ||||||||||||||||| |||| ||| || ||| | || | ||||||||| ||
Sbjct 1291 ACATATGCATATGGATACTATGTACCAGATGAT---CATACTAAGAA-ACAATTTTTTGA 1346
Query 1376 GTATTTGCAAGGGGAAGCTGAGTCAGGTTTAGAGAGGCTCCATC-AATGCGTAGAGAAGG 1434
||||||||||||||| |||||||||||||| ||||||||||| | ||||| ||||||| |
Sbjct 1347 GTATTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCA-CGAATGCATAGAGAATG 1405
Query 1435 AC-TTG-GCTCAGTTTCTCAAT--GCAGAAGGCCCATCAAAAGATTTCAATGATTTCCGG 1490
| ||| | | |||| ||| | || ||||| ||| | || |||||| ||||||||
Sbjct 1406 ATATTGAGGT--GTTTG--AATTTGGTGAGGGCCCTTCAGAGGAATTCAATCATTTCCGG 1461
Query 1491 ACAAAACTAGCTGGTTTGACCAGCGTGACGAAAAAC-TACTTTGAGAATTTGGTGAAAGC 1549
|||||| || ||| ||| |||||| | || |||||| | ||| | ||| |||| |||||
Sbjct 1462 ACAAAATTAACTGATTTAACCAGCATAAC-AAAAACCTTCTTCCAAAATCTGGTCAAAGC 1520
Query 1550 TCTGGAGAACGGTCTTGCTGATGTAGACTCACATGCGGCTTGCAGCA 1596
||||||||| ||||||||||| || || |||||||| ||| ||||||
Sbjct 1521 TCTGGAGAATGGTCTTGCTGACGTGGATTCACATGCTGCTAGCAGCA 1567
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85340926500
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5