BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg933703

Length=402
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G35630.1 | Symbols: MOR1, GEM1 | ARM repeat superfamily prot...  91.6    5e-18


> AT2G35630.1 | Symbols: MOR1, GEM1 | ARM repeat superfamily protein 
| chr2:14966678-14980606 FORWARD LENGTH=6332
Length=6332

 Score = 91.6 bits (49),  Expect = 5e-18
 Identities = 51/52 (98%), Gaps = 0/52 (0%)
 Strand=Plus/Plus

Query  99    AGGGGACTGCGGCTCCAAAGAGAGTTGTTAAGACGTCTGTTTCAACATCAAC  150
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct  2609  AGGGGACTGCGGCTCCAAAGAGAGTTGTTAAGACGTCAGTTTCAACATCAAC  2660



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 19001209122


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5