BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933722
Length=2329
Score E
Sequences producing significant alignments: (Bits) Value
AT2G31740.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 3777 0.0
> AT2G31740.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr2:13490908-13495110
REVERSE LENGTH=2529
Length=2529
Score = 3777 bits (2045), Expect = 0.0
Identities = 2239/2333 (96%), Gaps = 12/2333 (1%)
Strand=Plus/Plus
Query 1 GTGTGGATTCCATAGC--AGATATGGGGAAGAAGAAAGGAAATAAAGCAGCAGCTTCTTC 58
|||| | ||||||||| |||||||||||||||||||||||| |||||||||||||| |
Sbjct 81 GTGT-GTTTCCATAGCAGAGATATGGGGAAGAAGAAAGGAAACAAAGCAGCAGCTTCAAC 139
Query 59 AGATGATTTCTTACAAACCCTCGAAGATTTCACCAGCAAAGAGAATTGGGACAAATTCTT 118
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 140 AGATGATTTTTTACAAACCCTCGAAGATTTCACCAGCAAAGAGAATTGGGACAAATTCTT 199
Query 119 CACTCTCAGAGGCAACGACGACTCTTTCGAGTGGTATGCTGAGTGGCCTCAGCTCCGTGA 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 200 CACTCTCAGAGGCAACGACGACTCTTTCGAGTGGTATGCTGAGTGGCCTCAGCTCCATGA 259
Query 179 CTCGCTTTTACCTCTCCTCCAAGATTCTTCTTCATCTTCATCTTCTGGTTCGCTTCAGAT 238
|||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||
Sbjct 260 CTCGCTTTTACCTCTCCTCCAAGA---TTCTTCATCTTCTTCTTCTGATTCGCTTCAGAT 316
Query 239 TCTGGTTCCTGGATGTGGAAACTCCCGCCTTTCTGAGCATTTGTACGACGCTGGATTCCG 298
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 317 TCTGGTTCCTGGATGTGGAAACTCCCGCCTTACTGAGCATTTGTACGATGCTGGATTCCG 376
Query 299 TGACATCACCAATGTTGATTTCTCCAAGGTTGTGATCTCCGATATGCTTCGTCGGAATAT 358
||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct 377 TGACATCACTAATGTTGACTTCTCCAAAGTTGTTATCTCCGATATGCTTCGTCGGAACAT 436
Query 359 TAGGACTCGTCCTGAACTTCGTTGGCGAGTTATGGATATAACAAAGATGCAGTTGGCCGA 418
| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 437 TCGGACTCGGCCTGAACTGCGTTGGCGAGTTATGGATATAACAAAGATGCAGTTGGCTGA 496
Query 419 TGAGTCTTTTGATACTGTTCTAGATAAAGGTGCTCTTGATGCTTTGATGGAGCCAGAAGT 478
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 497 TGAGTCTTTTGATACGGTTCTAGATAAAGGTGCTCTTGATGCTTTGATGGAGCCAGAAGT 556
Query 479 TGGTACCAAGCTCGGAAATCAATACTTATCAGAGGCCAAGCGGGTTTTGAAACCTGGGGG 538
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 557 TGGTACCAAGCTGGGAAATCAATACTTATCAGAGGCCAAGCGGGTTTTGAAACCTGGGGG 616
Query 539 GAAGTTTATTTGTCTAAC-TCTGGCGGAGTCTCATGTCTTAGCATTGCTTTTTTCAAGAT 597
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 617 GAAGTTTATTTGTCTAACGT-TGGCGGAGTCTCATGTCTTAGCATTGCTTTTTTCAAGAT 675
Query 598 TTCGTTTTGGCTGGAAGATGAATGTTCATTCAATTGCTCAAAAACGCTCGAATCTTAAGA 657
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 676 TTCGTTTTGGTTGGAAGATGAATGTTCATTCAATTGCTCAAAAACGCTCGAAGCTTAAGA 735
Query 658 CGTTTATGGTGGTGGCTGAAAAGGAAAATTCCGTTTTATTGCATGAGATAACCTCTGCTT 717
| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 736 CATATATGGTGGTGGCTGAAAAGGAAAATTCCGTTTTGTTGCATGAGATAACCTCTGCTT 795
Query 718 TCGATCTTTTATCTCTTGGCCGCAACGATAGTCAGGGTTCTGGAATGCGTGAAGCCCTCG 777
|||| ||| |||||||||||||||| ||||||||||||||||| |||||||||||| |||
Sbjct 796 TCGAACTTGTATCTCTTGGCCGCAATGATAGTCAGGGTTCTGGCATGCGTGAAGCCGTCG 855
Query 778 AGAGTGAGAACCAAATACGTAGAGACTGCAATAATGGCTCAGACTTATTGTACTCTCATG 837
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 856 AGAGCGAGAACAAAATACGTAGAGACTGCAATAATGGCTCAGACTTATTGTACTCGCATG 915
Query 838 AAGATTTGAAACTTGGTATTAAAGGAGATTTGACAGAGCTTACTGGAGGTCGCCGTATAA 897
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 916 AAGATTTGAAACTTGGTATTAAAGGAGATTTGGCAGAGCTTACTGAAGGTCGCCGTATAA 975
Query 898 AATTTACTTTGGGTGGCCAAGGAAGCAATTTCAGTTATAGGGCCGTGCTTCTTGATGCTC 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 976 AATTTACTTTGGGTGGCCAAGGAAGCAATTTCAGTTATAGGGCCGTGCTTCTTGATGCTC 1035
Query 958 AAAAACAAACTGAGCCATTTGTATATCATTGTGGTGTTTTTCTTGTCCCCAAGACTCGGG 1017
| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 1036 AGAAACAAACTGAGCCATTTGTATATTATTGTGGTGTTTTTCTTGTCCCCAAGACTCGTG 1095
Query 1018 CTCATGAGTGGCTGTTCTCTTCAGAGGAAGGACAGTGGCAGGTTGTCGAGAGTTCTCAGG 1077
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 1096 CTCATGAGTGGCTGTTCTGTTCAGAAGAAGGACAGTGGCAGGTTGTCGAGAGTTCTCAGG 1155
Query 1078 CCGCTCGTCTCATAATGGTTTTTCTCGACAGTAGCCATAGTGGAGCCACCATGGAGGATA 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1156 CCGCTCGTCTCATAATGGTTTTTCTCGACAGTAGCCATAGTGGAGCCACCATGGAGGATA 1215
Query 1138 TCCAGAATGATTTATCTCCCATGGTGACACAACTAGCTCCTAGAAATGATGATGAAGAAG 1197
||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1216 TCCAGAATGATTTATCTCCAATGGTGACACAACTAGCTCCCAGAAATGATGATGAAG--- 1272
Query 1198 CTCGCATCCCGTATATGATGGCAAGTGATGGGATCAAAAAGCGTGATACTGTCCACGAGG 1257
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1273 CTCGCATTCCGTATATGATGGCAAGTGATGGGATAAAAAAGCGTGATACTGTCCACGAGG 1332
Query 1258 TTACATCTTCTTTGACTGGGAAAGTGGTTGTTGAAGATGTGGTTTATGAAAGCGCTCCTA 1317
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TTACATCTCCTATGACTGGGAAAGTGGTTGTTGAAGATGTGGTTTATGAAAGCGCTCCTA 1392
Query 1318 GTAATCTAGAAGACTTGTCTCCTTCTAGTGATTTGGCATTTCGACGCCTTGTATTCAAAA 1377
||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct 1393 GTAATTTAGAAGACTTGTCTACTTCTAGTGATTTGGCATTTCGACGACTTGTATTCAAAA 1452
Query 1378 GAACTGAGGGTTTGATACAGTCTGAAGCTTTGCTTGTAGAGGATGGTGAGATTCTTGAAC 1437
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1453 GGACTGAGGGTTTGATACAGTCTGAAGCTTTGCTTGTAGAGGATGGTGAGATTCTTGAAC 1512
Query 1438 AGTCTCAgaaagaaaaaactaaaaatgtttcccaatcgaaacgaaagggaaataaaaagc 1497
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1513 AGTCTCAGAAAGAAAAAACTAAAAATGTTTCCCAATCGAAGCGAAAGGGAAATAAAAAGC 1572
Query 1498 aaaatCAAGAACCAAGCAGGCCTCTTATGAGGGTCTCTCATGATTATCTGGCTAGCTCTT 1557
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1573 AAAACCAAGAACCGAGCAGGCCTCTTATGAGGGTCTCTCATGATTATCTGGCTAGCTCTT 1632
Query 1558 ACCACACTGGAATTATTTCTGGATTCACATTGGTATCTTCCTACTTAAAGAAGGCTGAGT 1617
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1633 ACCACACTGGAATTATTTCTGGATTCACATTGGTATCTTCCTACTTGAAGAAGGCTGAGT 1692
Query 1618 CATGCGGAACGATGGTTAAGACTGTTGTAATCGGTCTTGGAGCAGGATTGCTTCCCATGT 1677
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1693 CATGCGGAACGATGGTTAAGACTGTTGTAATTGGTCTTGGAGCAGGATTACTTCCCATGT 1752
Query 1678 TCCTCCATGGATGCTTGCCATTTTTCAGTATTGAGGCGGTTGAGCTTGACCCAGTAATGC 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1753 TCCTCCATGGATGCTTGCCATTTTTCAGTATTGAGGCGGTTGAGCTTGACCCAGTAATGC 1812
Query 1738 TTAATGTTGGCAAGGATTACTTTGGTTTCACACACAATCATCGCTTGAAGGTTCATATTG 1797
||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||
Sbjct 1813 TTAGTGTTGGCAAGGATTACTTTGGTTTCACACAAAATGATCGCTTGAAGGTGCATATTG 1872
Query 1798 CTGATGGGATCAAATTCATTAGAGATATAACAAACCCTGAAGCTTCGTCTGAGGAAACGT 1857
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1873 CTGATGGGATCAAATTCATTAGAGATATAACAAACTCTGAAGCTTCGTCTGAGGAATCGT 1932
Query 1858 CAAATGGTGGCTCAAATGGAGATTCAACGGCTCACAATACCCAAGGTGGAACTTGTCCTG 1917
|||| ||||||||||||||||||||| |||||||||| |||||||||| ||||||||
Sbjct 1933 CAAACATTGGCTCAAATGGAGATTCAACCACTCACAATACACAAGGTGGAATTTGTCCTG 1992
Query 1918 ACATTTTAATTATAGATGTGGATTCAGCAGATTCAAGCGGCGGATTAACCTGCCCTGCAT 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1993 ACATTTTAATTATAGATGTGGATTCAGCAGATTCAAGCGGCGGATTAACCTGCCCTGCAT 2052
Query 1978 CTGATTTTATCGAAGAGACATTTCTTCTTTCGGTTAAGCGCGCTCTCCCTCAGCACGGTC 2037
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2053 CTGATTTTATCGAAGAGACATTTCTTCTTTCGGTTAAGCAAGCTCTCCCTCAGCACGGTC 2112
Query 2038 TTTTCGTAGTGAACTTGGTCTCGAGATCACAATCCGTCAAAGATATGGTAGTATCAAGAA 2097
||||| ||||||| |||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 2113 TTTTCATAGTGAATTTGGTCACGAGATCACAGTCCGTCAAAGATATGGTAGTATCAAGAA 2172
Query 2098 TGAAAAAGGTTTTCGATCACTTATTCGGCCTGCAACTAGAAGAGGAAGATGACGTAAACG 2157
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 2173 TGAAAAAGGTTTTCGATCATTTATTTGGCCTGCAACTAGAAGAGGAAGATGACGTAAACG 2232
Query 2158 TAGTGCTCTTTGGGCTTTGCTCTGAATCTGTAATCAGCGAGATCGATATTCCAGAATCTG 2217
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2233 TAGTGCTCTTTGGGCTTTGCTCTGAATCTGTAATCAGCGAGAACGATATTCCAGAATCTG 2292
Query 2218 CAGTTATACTGGAGGGATTGCTCAAATGCCAGAGATTAGAAACGAAGCAAAGCATCATAG 2277
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 2293 CAGTTATACTGGAGGGATTGCTCAAGTGCCAGAGATTGGAAACGAAGCAAAGCATCATAG 2352
Query 2278 ACGCTACAAAGAAGTTGAAATGCTGGAAATAAAAACATTCTTTATTATT-CGT 2329
|||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 2353 ACGCTACAAAGAAGCTGAAATGCTGGAAATAAAAACATTCTTTATTATTTCGT 2405
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 115611855135
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5