BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg933746 Length=407 Score E Sequences producing significant alignments: (Bits) Value AT2G31940.1 | Symbols: | unknown protein; INVOLVED IN: biologi... 577 3e-164 > AT2G31940.1 | Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:13580600-13581112 FORWARD LENGTH=513 Length=513 Score = 577 bits (312), Expect = 3e-164 Identities = 363/388 (94%), Gaps = 2/388 (1%) Strand=Plus/Plus Query 21 ATGGGAAGAGATCAAGAAGGAAGCCCTCCAGTTCCCTTACATCTCTGCGTCTTCGTCCTG 80 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1 ATGGGAAGAGATCAAGAAGGAAGCCCTCCAGTTCCCTTACATCTCTGCGTCTTCGTCTTG 60 Query 81 ATCCTATTAATGTTCGTAACGATCTCATGGTACGCGAGCTACGAACCAGTCATAGAAGGA 140 ||||| |||||||||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct 61 ATCCTCTTAATGTTCGTAACAATCTCATGGTACGCCAGCTACGAACCAGTTATAGAAGGT 120 Query 141 TTTACGGATCAGTTCAAGCTCGCTCTCATGGCTTCTCCTCTGCTTTTGCTCTTGGCCGTC 200 |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 121 TTTACGTATCAGTTCAAGCTTGCTCTCATGGCTTCTCCTCTGCTTTTGCTCTTAGCCGTT 180 Query 201 CATTTTCTATCCAACGAT-AGAGGAGTAGGAGGGATGATGACGTCTTTGATCCATCTGAA 259 |||||||||||| | ||| | |||||| |||||||||||||||||||||||||||||||| Sbjct 181 CATTTTCTATCCGATGATCA-AGGAGTCGGAGGGATGATGACGTCTTTGATCCATCTGAA 239 Query 260 CGAAAGAGAGTCTTTGTATAGAGCTGGAGGAACACCATGGGGAGTCGCCTTCATGCTTGT 319 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 240 CGAAAGAGAGTCTTTGTATAGAGCTGGAGGAACACCGTGGGGAGTGGCCTTCATGCTTGT 299 Query 320 CTTTCTCTTCTTCATGGTTTCTTATCAATCTCAATTTCAAGAACGTTGGTTTCCTCTTCG 379 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 300 CTTTCTCTTCTTCATGGTTTCTTATCAATCTCAGTTTCAAGAACGTTGGTTTCCTCTTAG 359 Query 380 ACAATGAAACGACATCATTTTTTGGTTC 407 | ||||| | ||| || ||| ||||||| Sbjct 360 ATAATGAGATGACGTCGTTTATTGGTTC 387 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19252547867 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5