BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933764
Length=594
Score E
Sequences producing significant alignments: (Bits) Value
AT2G32020.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) sup... 918 0.0
AT2G32030.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) sup... 409 2e-113
> AT2G32020.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) superfamily
protein | chr2:13631062-13631768 REVERSE LENGTH=707
Length=707
Score = 918 bits (497), Expect = 0.0
Identities = 564/596 (95%), Gaps = 5/596 (1%)
Strand=Plus/Plus
Query 1 TCTCAAACAATCACT-ATACTAAATGGAGATGGACTCACAAGAAACTCAA-CCAATAATG 58
||| ||||||||||| || ||||||||||||||||||| |||||||| || |||||||||
Sbjct 2 TCTAAAACAATCACTAATCCTAAATGGAGATGGACTCAGAAGAAACT-AATCCAATAATG 60
Query 59 AGCTCTTCGCCTCCGGGAAGAATATCACTCCGGCCAATGACTCTTTCCGACGTCGACGAT 118
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct 61 AGCTCTTCGCCTCCGGGAAGAATATCTCTCCGGCCGATGACTCTTTCCGACGTCGATGAC 120
Query 119 TTCATGGTTTGGGCCACAGACCCTAAAGTGGCACGCTTTTGCACTTGGGAGCCTTGCACG 178
| |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct 121 TACATGGTTTGGGCCACAGATCCTAAAGTGGCTCGATTTTGCACTTGGGAGCCTTGCACG 180
Query 179 AGCCGGGACGAAGCAATCAAATACATAACCGATCGTGTCTTGACACACCCTTGGCTCCGA 238
||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 181 AGCCGAGACGAAGCTATCAAATACATAACCGATCGTGTCCTGACACACCCTTGGCTCCGA 240
Query 239 GCCATCTGCTTAGAAGACGACCGTCCGATCGGCTACATCTTGATCATGGCGGTTGATAAC 298
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 241 GCCATCTGCTTAGAAGACGACCGTCCAATCGGCTACATCTTGATCATGGCGGTTGATAAC 300
Query 299 ATCAGAAAAGAGATTGGTTATGTCCTAGCGAGAAAGTATTGGGGAAAAGGGTTTGCAACG 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 301 ATCAGAAAAGAGATTGGTTATGTCCTAGCGAGAAAGTATTGGGGAAAAGGGTTTGCCACG 360
Query 359 GAAGCGGTGAGGCTGGTGACGGCGGAGGTATTCAAGGAATTTCCGGAGATTGAGAGACTT 418
||||| |||||||| ||||| |||||||||||| |||||||||| |||||||| || |||
Sbjct 361 GAAGCAGTGAGGCTAGTGACCGCGGAGGTATTCGAGGAATTTCCAGAGATTGAAAGGCTT 420
Query 419 GAGGCACTTGTTGATGTGGACAATGTCGGATCTCAAAGGGTTCTTGAAAAAGTTGGGTTT 478
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 421 GAGGCACTTGTTGATGTGGACAATGTTGGATCTCAAAGGGTTCTTGAAAAAGTTGGGTTT 480
Query 479 ACTAGAGAAGGTGTGATGAGGAAGTTTCTATGTATCAAGGGAAGTGTAAGAGACACTGTT 538
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 481 ACTAGAGAAGGTGTGATGAGGAAGTTTATATGTATCAAGGGAAGTGTAAGAGACACTGTT 540
Query 539 ATGTTTAGTTTCTTGCCTACTGATACTTTGAAGTAAATTGATCAACAAAAAAGATT 594
||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||
Sbjct 541 ATGTTTAGTTTCTTGTCTACTGATACTTTGAAGTAA-TTAATCAACAAAAA-GATT 594
> AT2G32030.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) superfamily
protein | chr2:13632468-13633335 REVERSE LENGTH=868
Length=868
Score = 409 bits (221), Expect = 2e-113
Identities = 425/520 (82%), Gaps = 28/520 (5%)
Strand=Plus/Plus
Query 57 TGAGCTCTTCGCCTCCGGGAAGAATAT-CA-CTCCGGCCAATGACTCTTTCCGACGTCGA 114
|||| || || ||||| || |||| || || |||||||||||||||||||||||||||||
Sbjct 144 TGAGTTCCTCACCTCC-GG-AGAAAATCCATCTCCGGCCAATGACTCTTTCCGACGTCGA 201
Query 115 CGATTTCATGGTTTGGGCCACAGACCCTAAA-GTGGCACGCTTTTGCACTTGGGAGCCTT 173
||||||||||||||||||||| ||| | ||| || ||||||||||||| ||||||||||
Sbjct 202 CGATTTCATGGTTTGGGCCACTGACTC-AAACGTCACACGCTTTTGCACGTGGGAGCCTT 260
Query 174 GCACGAGCCGGGACGAAGCAATCAAATACATAACCGATCG-TGTCTTGACACACCCTTGG 232
||| ||||| || | || ||| ||| ||| ||| || | | ||| |||||||||||
Sbjct 261 ACACTAGCCGAGAAGCCGCGATCGCGTACTTAAACGA-CGCTCTTTTGCCACACCCTTGG 319
Query 233 CTCCGAGCCATCTGCTTAGA-AGACGACCGTCCGATCGGCTAC-ATCTT-GATCATGGCG 289
|| |||| || |||||||| | ||||||||||||| |||| | |||| | | | | |
Sbjct 320 CTTAGAGCTATATGCTTAGATA-ACGACCGTCCGATTGGCT-CGATCTCCG-TAACGCCA 376
Query 290 GTTGATAACATCAGAAAAGAGATTGGTTATGTCCTAGCGA-GAAAGTATTGGGGAAAAGG 348
|| ||| | |||||| |||||||||||||||||| | || | ||||||||||| |||||
Sbjct 377 GTCGATGAGATCAGAGGAGAGATTGGTTATGTCCTCG-GAAGCAAGTATTGGGGGAAAGG 435
Query 349 GTTTGCAACGGAAGCGGTGAGGCTGGTGACGGCGGAGGTATTCAAGGA-ATTTCCGGAGA 407
| | || || |||||||||||||| ||| ||| |||| |||||||||| | || ||||
Sbjct 436 GATCGCCACTGAAGCGGTGAGGCTTGTGGCGGGGGAGATATTCAAGGAGAAG-CCAGAGA 494
Query 408 TTG-AGAGACTTGAGGCACTTGTTGATGTGGACAATGTCGGATCTCAAAGGGTTCTTGAA 466
| | |||| ||||||||||||||||| || |||||||| |||||||||| ||||||||||
Sbjct 495 T-GCAGAGGCTTGAGGCACTTGTTGACGTTGACAATGTTGGATCTCAAAAGGTTCTTGAA 553
Query 467 AAAGTTGGGTTTACT-AGAGAAGGTGTGATGAGGAAGTTTCTATGTATC--AAGGGAAGT 523
|||||||||||| | | |||||||||||||||||| ||| ||||||| || |||| |
Sbjct 554 AAAGTTGGGTTTG-TGAAAGAAGGTGTGATGAGGAAATTT--ATGTATCTTAAAGGAAAT 610
Query 524 GTAAGAGACACTGTT-ATGTTTAGTTTCTTGCCTACTGAT 562
|| ||||| | || | |||||||||||||||||| |||||
Sbjct 611 GTTAGAGATA-TGGTCATGTTTAGTTTCTTGCCTTCTGAT 649
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 28583229643
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5