BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933776
Length=1116
Score E
Sequences producing significant alignments: (Bits) Value
AT2G32160.3 | Symbols: | S-adenosyl-L-methionine-dependent met... 1050 0.0
AT2G32170.2 | Symbols: | S-adenosyl-L-methionine-dependent met... 351 6e-96
> AT2G32160.3 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr2:13662213-13666269
FORWARD LENGTH=1553
Length=1553
Score = 1050 bits (568), Expect = 0.0
Identities = 689/746 (92%), Gaps = 14/746 (2%)
Strand=Plus/Plus
Query 17 CCATAATGATTTCATTGTCAGAGATGATGGCGACGGAGACGGCACCAGAATTTGTTACAA 76
||||||||||||||| ||||||||||||||||||||||| ||| || |||||||| |||
Sbjct 21 CCATAATGATTTCATCGTCAGAGATGATGGCGACGGAGAAGGCTCCGGAATTTGTAACAG 80
Query 77 CCACGAAAACGGAAACTGAACGGATAGAGAATTCGAGTGAAGTAGATGAGGAAGAAGAGG 136
||| | ||| |||||||||||||||| ||||||||| ||||||||| ||||
Sbjct 81 CCATGGCAACTGAAACTGAACGGATAGGGAATTCGAGGGAAGTAGAT---------GAGG 131
Query 137 AGAAAATACGCCGTC-AGAAGAAGCCTGAAGAAGAAGCTCTCGAAGCCAAATGTCTTCCC 195
|||||||| |||| | ||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct 132 AGAAAATAAGCCG-CAAGAAGAATCCTGAAGAAGAAGCTCTTGAAGCTAAATGTCTTCCC 190
Query 196 GGAATCATCAGTGCTTATCTCAATTATCCCAAGGCTGCGGAAGAAAATCTGAAAAAATGC 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 191 GGAATCATCAGTGCTTATCTCAATTATCCCAAGGCTGCGGAAGAAAATCTGAAAAAATGC 250
Query 256 GAAAGGTCTTATCAGAAGCTGTCTCCTGCGCACAAGGCATTGGTAACCCATTTCCCTACG 315
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 251 GAAAGATCATATCAGAAGCTGTCTCCTGCGCACAAGGCATTGGTAACCCATTTCCCTATG 310
Query 316 AAGTTGCAGAGATTAAGAAGGTGTATATCGATGAATTCACATTTCATATATAATATGATT 375
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 311 AAGTTGCAGAGATTAAGAAGGTGTATATTGATGAATTCACATTTCATATATAATATGCTT 370
Query 376 CAGGCTTTTGAGCCCCCTATAGACTTGAGTAAACACATACGGGAGCCAATAACAGGAGCA 435
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 371 CAGGCTTTTGAGCCCCCTATAGACTTGAGTAAACACATGCGCGAGCCAATAACAGGAGCA 430
Query 436 CTGTCTATCGAGGGGTTTCAAAGGGATGAAACTCATCATCATGATCATTCCCTCAAGAAT 495
|||||||| |||| | | |||||||| ||| | ||||||||||||||||||||||||||
Sbjct 431 CTGTCTATGGAGGAGCTCCAAAGGGAGGAA-C--ATCATCATGATCATTCCCTCAAGAAT 487
Query 496 ACAGAGATAAGAATCAATAATAAGACATGTGAATTTGTTGGAGGCCAGATAAGTCATGAC 555
||||||||||| ||||||| |||||||||||||||| ||||||||| ||| |||||||
Sbjct 488 GCAGAGATAAGACTCAATAACAAGACATGTGAATTTGATGGAGGCCACTTAAATCATGAC 547
Query 556 CATGGCAGTGTACCATTTTCATCTCAGGATTGGTTGGATTCATCGTTACAGACGCATGTT 615
|||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||
Sbjct 548 CATGGCAGTGTACCATTTTCATCTCATGATTGGTTGGATTCTTCGTTACAGGCGCATGTT 607
Query 616 CCTCAGGTTGATGTAAATAAGGTTCGTTGGGTAATAAGGAATATAGTTCGAGACTGGGGA 675
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 608 CCTCTGGTTGATGTAAATAAGGTTCGTTGGGTAATAAGGAATATAGTTCGAGACTGGGGA 667
Query 676 TCAGAGGGTCAGAGAGAAAGAGATGAATGCTACAAGCCTATCCTTGAAGAGATTGATTCC 735
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 668 GCAGAGGGTCAGAGAGAACGAGATGAATGCTACAAGCCTATCCTTGAAGAGCTTGATTCC 727
Query 736 TTGTTCCCTGATCGTCACAAGGAGAG 761
||||| ||||||||||||||||||||
Sbjct 728 TTGTTTCCTGATCGTCACAAGGAGAG 753
Score = 302 bits (163), Expect = 6e-81
Identities = 179/187 (96%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 762 TACACAATCGCCTGATGAGTGGACAATATACCCCTGGATACACACTAACTGCAATTCCCT 821
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 889 TACACAATTGCCTGGTGAGTGGACAATATACCCCTGGATACACACTAACTGCAATTCACT 948
Query 822 CTCGAATGATGATCAACTACGCCCTATTTCTATTCCTGATATTCATCCTCCAAGTGCAGG 881
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 949 CTCGGATGATGATCAACTACGCCCTATTTCTATTCCTGATATTCATCCTGCAAGTGCAGG 1008
Query 882 AGTAACAGAAGGTTTCTCTATGTGTGGTGGTGATTTTGTTGAAGTATTCAATGAATCAAG 941
|||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 1009 AGTAACAGAAAGTTTCTCAATGTGTCGTGGTGATTTTGTTGAAGTATTCAATGAATCAAG 1068
Query 942 TCAAGCA 948
|||||||
Sbjct 1069 TCAAGCA 1075
Score = 148 bits (80), Expect = 8e-35
Identities = 90/95 (95%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 946 GCATACGAACATGGCCTGGAAAATGAAATGTCGATTGAGCTAAGTTTGGAGGATGTAAAG 1005
||| |||| || ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1211 GCAGACGAGCAGGGCCTTGAAAATGAAATGTCGATTGAGCTAAGTTTGGAGGATGTAAAG 1270
Query 1006 AGGGTTGCTTCACATTATGGGTTTGAGATGGAGAA 1040
|| ||||||||||||||||||||||||||||||||
Sbjct 1271 AGAGTTGCTTCACATTATGGGTTTGAGATGGAGAA 1305
Score = 106 bits (57), Expect = 5e-22
Identities = 73/80 (91%), Gaps = 4/80 (5%)
Strand=Plus/Plus
Query 1032 GATGGAGAATCGATACTATCCTGTCTTCTGGACAATGAGGAAGAAATGTG-T-TA-CAAC 1088
|||| |||| ||||||||||||||||||||||||||||||||||| |||| | || ||||
Sbjct 1351 GATGAAGAACCGATACTATCCTGTCTTCTGGACAATGAGGAAGAAGTGTGCTATAACAAC 1410
Query 1089 AACTTAAACCAAATATTCCT 1108
||||||| ||||||||||||
Sbjct 1411 AACTTAA-CCAAATATTCCT 1429
> AT2G32170.2 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr2:13666456-13671515
FORWARD LENGTH=2327
Length=2327
Score = 351 bits (190), Expect = 6e-96
Identities = 284/328 (87%), Gaps = 12/328 (4%)
Strand=Plus/Plus
Query 84 AACGGAAA-CTGAACGGATAGAGAATTCGAGTGAA---GTAGATGAGGAAGAAGAGGAGA 139
|||||||| | ||| ||||||||| |||||| ||| || ||| | ||||| |||||||
Sbjct 68 AACGGAAAGC-GAAAGGATAGAGAGTTCGAGGGAACTCGTGGATAATGAAGAGGAGGAGA 126
Query 140 AAATACGCCGTCAGAAGAAGCCTGAAGAAGAAGCTCTCGAAGCCAAATGTCTTC-CCGGA 198
|||||||||||||||||||| || |||||||||||||||||||||| ||||| || |
Sbjct 127 AAATACGCCGTCAGAAGAAG-CT--CGAAGAAGCTCTCGAAGCCAAATCTCTTCGCC-GC 182
Query 199 ATCATCAGTGCTTATCTCAATTATCCCA-AGGCTGCGGAAGAAAATCTGAAAAAATGCGA 257
|| ||||||||||| |||||||| |||| ||||| ||||||| || |||||| ||| ||
Sbjct 183 ATTATCAGTGCTTACCTCAATTA-CCCAGAGGCTTCGGAAGAGGATTTGAAAAGATGGGA 241
Query 258 AAGGTCTTATCAGAAGCTGTCTCCTGCGCACAAGGCATTGGTAACCCATTTCCCTACGAA 317
||| || |||| ||||||||||||||| ||||||||||||||| |||||| ||||| |||
Sbjct 242 AAGATCATATCGGAAGCTGTCTCCTGCACACAAGGCATTGGTACCCCATTACCCTATGAA 301
Query 318 GTTGCAGAGATTAAGAAGGTGTATATCGATGAATTCACATTTCATATATAATATGATTCA 377
||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||
Sbjct 302 GTTTCAGAGATTAAGAAGGTGTATATCGGCGAATTCATATTTCATATTTAATATGCTTCA 361
Query 378 GGCTTTTGAGCCCCCTATAGACTTGAGT 405
|||||||||||| |||||||||||||||
Sbjct 362 GGCTTTTGAGCCTCCTATAGACTTGAGT 389
Score = 257 bits (139), Expect = 1e-67
Identities = 173/189 (92%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 762 TACACAA-TCGCCTGATGAGTGGACAATATACCCCTGGATACACA-CTAACTGCAATTCC 819
||||||| || |||| ||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1208 TACACAAGTC-CCTGGTGAGTGGACAATATACCCCTGGATACACAGC-AACTGCAATTCG 1265
Query 820 CTCTCGAATGATGATCAACTACGCCCTATTTCTATTCCTGATATTCATCCTCCAAGTGCA 879
|||||| | ||||||| |||||||||||| | |||||||||||||||||| ||||||||
Sbjct 1266 CTCTCGGACAATGATCAGCTACGCCCTATTGCGATTCCTGATATTCATCCTGCAAGTGCA 1325
Query 880 GGAGTAACAGAAGGTTTCTCTATGTGTGGTGGTGATTTTGTTGAAGTATTCAATGAATCA 939
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1326 GGAATAACAGAAGGTTTCTCTATGTGTGGTGGTGATTTTGTTGAAGTATACAATGAATCA 1385
Query 940 AGTCAAGCA 948
||||| |||
Sbjct 1386 AGTCATGCA 1394
Score = 119 bits (64), Expect = 7e-26
Identities = 79/86 (92%), Gaps = 2/86 (2%)
Strand=Plus/Plus
Query 956 ATGGCC-TGGAAAATGAAATGTCGATTGAGCTAAGTTTGGAGGATGTAAAGAGGGTTGCT 1014
|||||| | |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1540 ATGGCCAT-GAAAATGAAATGTCTATCGAGCTAAGTTTGGAGGATGTAAAGAGGGTTGCT 1598
Query 1015 TCACATTATGGGTTTGAGATGGAGAA 1040
||||||| |||||||| ||| |||||
Sbjct 1599 TCACATTTTGGGTTTGTGATCGAGAA 1624
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54718594050
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5