BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg933782 Length=235 Score E Sequences producing significant alignments: (Bits) Value AT2G32210.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 254 3e-67 AT2G32190.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 213 6e-55 > AT2G32210.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32190.1); Has 214 Blast hits to 214 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 10; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:13677986-13678830 FORWARD LENGTH=583 Length=583 Score = 254 bits (137), Expect = 3e-67 Identities = 208/238 (87%), Gaps = 21/238 (9%) Strand=Plus/Plus Query 14 TTCGAAGATGAGCCAATACAGCC--AA--AA-C--CA--AGCTTATCCTACGCCACCAGT 64 ||| |||||||| |||||||||| || || | || ||||||||||||||| ||||| Sbjct 85 TTCCAAGATGAGTCAATACAGCCAAAACCAATCTTCAGGAGCTTATCCTACGCCGCCAGT 144 Query 65 GTCTACCGGCCCTTACGTGGCACCACCACCGCTAGGTTACCCAACGAACGACACAAGTCA 124 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 145 GTCTACCGGCCCTTACGTGGCACCGCCACCGCTAGGTTACCCAACGAACGACACAAGTCA 204 Query 125 TGCCACGGTGGCTCCGGTGGAGACAAAGTCCAAGGGTGATGGA--C--A------T--CT 172 |||||||||||| ||||||||||||||||||||||||||||| | | | || Sbjct 205 TGCCACGGTGGCAACGGTGGAGACAAAGTCCAAGGGTGATGGATTCTTAAAAGGCTGTCT 264 Query 173 TGCGGCCATGTGTTGTTGTTGTGTCCTCGACGCATGCTTCTGAGGACATCGATGGTTT 230 ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct 265 TGCGGCCATGTGTTGTTGTTGTGTCCTCGACGCATGCTTCTGAAGACTTAGATGGTTT 322 > AT2G32190.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 218 Blast hits to 218 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 16; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:13674498-13675286 FORWARD LENGTH=500 Length=500 Score = 213 bits (115), Expect = 6e-55 Identities = 198/233 (85%), Gaps = 25/233 (11%) Strand=Plus/Plus Query 6 ATAATCAT-TTCGAAGATGAGCCAATACAGCC--AA--AA-C--CA--AGCTTATCCTAC 55 |||||| | ||||||||||||||||||||||| || || | || |||||||||||| Sbjct 76 ATAATC-TGTTCGAAGATGAGCCAATACAGCCAAAACCAATCTTCAGGAGCTTATCCTAC 134 Query 56 GCCACCAGTGTCTACCGGCCCTTACGTGGCACCACCACCGCTAGGTTACCCAACGAACGA 115 ||| |||||||||||||||||||| || |||| |||||||| |||||||| |||| ||| Sbjct 135 GCCGCCAGTGTCTACCGGCCCTTATATGACACCGCCACCGCTCGGTTACCCGACGAGCGA 194 Query 116 CA-CAAGTCATGCCACGGTGGCTCCGGTGGAGACAAAGTCCAAGGGTGATGGA--C---A 169 || | |||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 195 CATC-AGTCATGCCACGGTGGCTCCGGTGGAGACAAAGTCCAAGGGTGATGGATTCTTGA 253 Query 170 -----T--CTTGCGGCCATGTGTTGTTGTTGTGTCCTCGACGCATGCTTCTGA 215 | ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 254 AAGGCTGTCTTGCGGCCATGTGTTGCTGTTGTGTCCTCGACGCCTGCTTCTGA 306 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 10606495039 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5