BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933807
Length=1612
Score E
Sequences producing significant alignments: (Bits) Value
AT2G32410.1 | Symbols: AXL | AXR1-like | chr2:13757593-13761077... 2490 0.0
AT1G05180.1 | Symbols: AXR1 | NAD(P)-binding Rossmann-fold supe... 1502 0.0
> AT2G32410.1 | Symbols: AXL | AXR1-like | chr2:13757593-13761077
FORWARD LENGTH=1896
Length=1896
Score = 2490 bits (1348), Expect = 0.0
Identities = 1528/1616 (95%), Gaps = 8/1616 (0%)
Strand=Plus/Plus
Query 1 GACTCGAGCAAGAACCAACAATGGCGGAACCCAAGACCAAGTACGATCGTCAACTCAGGA 60
|||||||||| ||||||||||||||||||||||| |||||||| |||||||| || ||||
Sbjct 90 GACTCGAGCACGAACCAACAATGGCGGAACCCAAAACCAAGTATGATCGTCAGCTAAGGA 149
Query 61 TTTGGGGAGAACTAGGTCAATCGGCTCTTGAAAACGCGAGCATCTGTTTGCTCAATTGTG 120
||||||||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||
Sbjct 150 TTTGGGGAGAATTAGGTCAATCAGCTCTTGAAACCGCGAGCATATGTTTGCTCAATTGTG 209
Query 121 GCCCAACTGGCTCTGAGGCTCTAAAGAATCTTGTTCTTGGTGGAATCGGAAGTATCACCA 180
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 210 GTCCAACTGGCTCTGAGGCTCTAAAGAATCTTGTTATTGGTGGAATCGGAAGTATCACCA 269
Query 181 TCGTTGACGGATCTAAAGTAGAAATTGGCGACCTTGGAAACAATTTCATGGTGGATGCGA 240
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 270 TTGTCGACGGATCTAAAGTAGAAATTGGCGACCTTGGAAACAATTTCATGGTGGATGCGA 329
Query 241 AGAGCGTTGGTCAGTCAAAAGCCAAAACTGTCTGTGGCTTTCTTCAGGAGATTAACGATG 300
|||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||
Sbjct 330 AGAGCGTTGGTCAGTCAAGAGCCAAAACGGTCTGTGGCTTTCTTCAGGAGCTTAACGATT 389
Query 301 CTGTTAAATCAAACTTTGTTGAGGAGAATCCAGACACATTGATTTCGACTGACCCATCTT 360
|||||||| |||| ||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct 390 CTGTTAAAGCAAATTTTGTTGAGGAGAATCCAGACACTTTGATATCGACAGACCCATCTT 449
Query 361 TCTTCTCTCAGTTCACTCTAGTTATCGCCACTCAGCTAGTGGAAGATTCAATGGTGAAAT 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 450 TCTTCTCTCAGTTCACTCTAGTTATCGCCACTCAGCTAGTAGAAGATTCAATGGTGAAAT 509
Query 421 TAGATAGAATCTGCCGGGAAGCAAAGGTCATGTTGGTTTTGGCTCGCTCCTATGGCCTTA 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 510 TAGATAGAATCTGCCGGGAAGCAAACGTCATGTTGGTTTTGGCTCGCTCCTATGGACTTA 569
Query 481 CTGGGTTTGTTCGTATCTGTGTAAAGGAGCACACCGCTATCGAGTCAAAGCCTGATCATT 540
||||||||||||||||| |||||||||| ||||||||||| ||| |||||||||||||||
Sbjct 570 CTGGGTTTGTTCGTATCAGTGTAAAGGAACACACCGCTATTGAGACAAAGCCTGATCATT 629
Query 541 CTCTTGATGATCTCCGCTTGAATAATCCATGGCCTGAACTGAAGAGGTATGTGGAGTCCA 600
|||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||
Sbjct 630 CTCTTGATGATCTCCGCTTGAATAGTCCATGGCCTGAGCTGAAGAGCTATGTGGAGTCCA 689
Query 601 TTGATTTAAATGTAGAAGAACCCGCTGCCCATAAGCACATTCCTTACGTCGTCATTCTAG 660
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 690 TTGATCTAAATGTAGAAGAACCCGCTGCCCATAAGCACATTCCTTACGTCGTCATTCTAG 749
Query 661 TCAAGGTGGCTGAAGAATGGGCTCAAAC-CCATAGCAGCAACCTTCCATCAACCAGGGAA 719
|||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||
Sbjct 750 TCAAGGTGGCTGAAGAATGGGCTC-AACACCATAGCGGCAACCTTCCATCAACCAGGGAA 808
Query 720 GAGAAAAACGAGTTTAAGGATTTAGTTAAGTCCAAGATGGCATCAACGGATGAAGATAAC 779
|||||||||||||||||||| ||||||||||||||||||| |||| |||||||||| ||
Sbjct 809 GAGAAAAACGAGTTTAAGGACTTAGTTAAGTCCAAGATGGTATCAGCGGATGAAGAAAAT 868
Query 780 TACAAAGAAGCCATTGTAGCCGCTTTCAAAGTTTTTGCTCCTAGAGGAATCAGCCAAGAG 839
|||||||||||| || | || ||||||||||| |||||||||| ||||||||||||||||
Sbjct 869 TACAAAGAAGCCCTTCTTGCAGCTTTCAAAGTCTTTGCTCCTACAGGAATCAGCCAAGAG 928
Query 840 ATTCAAGACATTATTCATGATAGATGTGCTGAAGTTGGCTCAAATTCCTCAGATTTTTGG 899
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 929 ATTCAAGACATTAATCATGATAGTTGTGCTGAAGTTGGCTCAAATTCCTCAGATTTTTGG 988
Query 900 GTAATGGTAGCAGCACTCAAGGAGTTTATTTCAAATGAAGGTGGTGGGGAGCCACCACTT 959
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 989 GTAATGGTAGCAGCACTCAAGGAGTTTATTTCAAATGAAGGTGGTGGGGAGGTACCACTT 1048
Query 960 GAAGGTTCCATGCCTGATATGATATCTTCCACAGAGCACTACATCAATTTGCAGAAAATC 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1049 GAAGGTTCCATGCCTGATATGATATCTTCCACAGAGCACTACATCAATTTGCAGAAAATC 1108
Query 1020 TACCATTCCAAAGCTGAAGCTGATTTTCTTTCCATGGAGCAGAGAGTAAAAAGCATTCTA 1079
|||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1109 TACCATTCCAAAGCGGAAGCTGATTTTCTTTCCATGGAACAGAGAGTAAAAAGTATTCTA 1168
Query 1080 GTTAAAGTTGGTCAGGATCCAAGTAGCATCCCAAAATCAACTATCAAGATCTTCTGCAAG 1139
|||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||
Sbjct 1169 GTTAAAGTTGGTCAGGATCCAAGTAGCATCTCAAAGCCAACTATCAAGAGCTTCTGCAAG 1228
Query 1140 AATGCAAGAAAACTTAAAGTCTGCAGATATCA-AACGATAGAGGACGAGTTCAGAAA-TC 1197
|||||| ||||||||||||||||||||||| | ||||||||| |||||||||| ||| ||
Sbjct 1229 AATGCACGAAAACTTAAAGTCTGCAGATAT-AGAACGATAGAAGACGAGTTCA-AAAGTC 1286
Query 1198 CTTCTGCAACAGAACTACATAAGTACTTGGCTGATGAGGATTACAGTAGTGCAATTGGAT 1257
||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||||
Sbjct 1287 CTTCTACAACAGAACTACATAAGTACTTGGCTGATGAGAATTACAGTGGCGCAATTGGAT 1346
Query 1258 TTTATATTCTTCTTAGAGCTGTTGATAGATTTGCTGCG-ACCTATAAGAAGTTTCCTGGA 1316
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 1347 TTTATATTCTTCTTAGAGCTGTTGATAGATTTGCTG-GTACCTATAAGAAGTTTCCTGGA 1405
Query 1317 CAGTTTGATGGATCAACTGATGATGACGCATCCCAGTTAAAGACCATTGCCCTGAGTCTT 1376
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 1406 CAGTTTGATGGATCAACTGATGAGGACGCATCCCAGTTAAAGACTATTGCCCTGAGTCTT 1465
Query 1377 CTTAGCGAAATGGGTTGTGACGGCTATGTACTTAAGGAAGAACTTTATAGTGAGATGTGT 1436
||||| |||||||||||||||||||||| |||| |||||||||| || | ||||||||||
Sbjct 1466 CTTAGTGAAATGGGTTGTGACGGCTATGAACTTCAGGAAGAACTGTACAATGAGATGTGT 1525
Query 1437 AGATTTGGTGCTGCAGAGATTCACGTGGTTGCTGCTTTCATAGGAGGAGTCGCATCTCAA 1496
|||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct 1526 AGATTTGGTGCTGCAGAGATTCACGTGGTTGCTGCTTTAATAGGAGGAATCACATCTCAA 1585
Query 1497 GAAGTGATCAAGCTTATCACGAAGCAGTTTGTTCCCATGCTAGGAACTTTCATCTTCAAC 1556
|||||||||||||| ||||| |||||||||||||||| || |||||||||||||||||||
Sbjct 1586 GAAGTGATCAAGCTCATCACAAAGCAGTTTGTTCCCAAGCGAGGAACTTTCATCTTCAAC 1645
Query 1557 GGCATTGATCACAGGTCTCAGTCTTTGAAATTATAAAAGATTCTTAGACACTGGTG 1612
||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||
Sbjct 1646 GGCATTGATCACAAGTCTCAGTCTTTGACATTATAGAAGATTCTTAGACACTGGTG 1701
> AT1G05180.1 | Symbols: AXR1 | NAD(P)-binding Rossmann-fold superfamily
protein | chr1:1498114-1501824 REVERSE LENGTH=1915
Length=1915
Score = 1502 bits (813), Expect = 0.0
Identities = 1358/1618 (84%), Gaps = 50/1618 (3%)
Strand=Plus/Plus
Query 10 AAGAACCAACAATGGCGGAACCCAAGACCAAGTACGATCGTCAACTCAGGATTTGGGGAG 69
|||| |||||||||| ||||| || ||||||||||||||||| |||||||||||||| |
Sbjct 87 AAGAGCCAACAATGGTAGAACCTAAAACCAAGTACGATCGTCAGCTCAGGATTTGGGGGG 146
Query 70 AACTAGGTCAATCGGCTCTT-GAA-AACGCGAGCATCTGTTTGCTCAATTGTGGCCCAAC 127
| |||||||| |||| ||| ||| || ||||| |||||||| |||||||||||||| ||
Sbjct 147 AGGTAGGTCAAGCGGC-CTTGGAAGAA-GCGAGTATCTGTTTACTCAATTGTGGCCCTAC 204
Query 128 TGGCTCTGAGGCTCTAAAGAATCTTGTTCTTGGTGGAATCGGAAGTATCACCATCGTTGA 187
||| || |||||| | |||||||| || |||||||| | || || |||||| | |||||
Sbjct 205 TGGTTCCGAGGCTTTGAAGAATCTCGTACTTGGTGGTGTTGGTAGCATCACCGTTGTTGA 264
Query 188 CGGATCTAAAGTAGAAATTGGCGACCTTGGAAACAATTTCATGGTGGATGCGAAGAGCGT 247
|||||||| || || |||| |||||||| |||||||||||||| ||||||||||| ||
Sbjct 265 TGGATCTAAGGTTCAATTTGGTGACCTTGGGAACAATTTCATGGTCGATGCGAAGAGTGT 324
Query 248 TGGTCAGTCAAAAGCCAAAACTGTCTGTGGC-TTTCTTCAGGAGATTAACGATGCTGTTA 306
||| || |||||||||||| |||| ||| || ||||| || ||| |||| ||| ||||||
Sbjct 325 TGGCCAATCAAAAGCCAAATCTGTTTGT-GCGTTTCTCCAAGAGCTTAATGATTCTGTTA 383
Query 307 AATCAAACTTTGTTGAGGAGAATCCAGACACATTGATTTCGACTGACCCATCTTTCTTCT 366
| | || ||| ||||||||||||||||||| |||||| | ||| |||||||||||||||
Sbjct 384 ACGCCAAGTTTATTGAGGAGAATCCAGACACGTTGATTACTACTAACCCATCTTTCTTCT 443
Query 367 CTCAGTTCACTCTAGTTATCGCCACTCAGCTAGTGGAAGATTCAATGGTGAAA-TTAGAT 425
||||||||||||| ||||| ||||||||||| ||||||||||||||| ||||| || |||
Sbjct 444 CTCAGTTCACTCTCGTTATAGCCACTCAGCTGGTGGAAGATTCAATGTTGAAACTT-GAT 502
Query 426 AGAATCTGCCGGGAAGCAAAGGTCATGTTGGTTTTGGCTCGCTCCTATGGCCTTACTGGG 485
|||||||| || || ||||| || | ||||||||||| |||||| ||||||||| |||||
Sbjct 503 AGAATCTGTCGAGATGCAAACGTTAAGTTGGTTTTGGTTCGCTCTTATGGCCTTGCTGGG 562
Query 486 TTTGTTCGTATCTGTGTAAAGGAGCACACCGC-T-ATCGAGTCAAAGCCTGATCATTCTC 543
|||||||| |||| ||||||||||||| || | | || || ||||| |||||||||| ||
Sbjct 563 TTTGTTCGCATCTCTGTAAAGGAGCAC-CC-CATAATTGACTCAAAACCTGATCATTTTC 620
Query 544 TTGATGATCTCCGCTTGAATAATCCATGGCCTGAACTGAAGAGGTATGTGGAGTCCATTG 603
|||| || |||||| |||||||||||||||||||||| ||||| | ||||||| ||||||
Sbjct 621 TTGACGACCTCCGCCTGAATAATCCATGGCCTGAACTCAAGAGTTTTGTGGAGACCATTG 680
Query 604 ATTTAAATGTAGAAGA-AC--CCGCTGCCCATAAGCACATTCCTTACGTCGTCATTCTAG 660
|| | |||||| ||| | ||||||| ||||||||||| ||||||||||||||||| |
Sbjct 681 ATCTGAATGTATCAGAGCCGGCCGCTGCACATAAGCACATACCTTACGTCGTCATTCTTG 740
Query 661 TCAAGGTGGCTGAAGAATGGGCTCAAACCCATAGCAGCAACCTTCCATCAACCAGGGAAG 720
| ||| ||||||| || ||||||||| ||||||| | || ||||| |||||||||||||
Sbjct 741 TAAAGATGGCTGAGGAGTGGGCTCAATCCCATAGTGGTAATCTTCCCTCAACCAGGGAAG 800
Query 721 AGAAAAACGAGTTTAAGGATTTAGTTAAGTCCAAGATGGCATCAACGGATGAAGATAACT 780
||||||| |||||||||||||| |||||||||||||||| ||| ||||||||||||||||
Sbjct 801 AGAAAAAAGAGTTTAAGGATTTGGTTAAGTCCAAGATGGTATCTACGGATGAAGATAACT 860
Query 781 ACAAAGAAGCCATTGTAGCCGCTTTCAAAGTTTTTGCTCCTAGAGGAATCAGC-CAAGAG 839
||||||||||||||| ||||||||||||||||||||||||| ||||||||||| || |||
Sbjct 861 ACAAAGAAGCCATTGAAGCCGCTTTCAAAGTTTTTGCTCCTCGAGGAATCAGCTCA-GAG 919
Query 840 ATTCAAGACATTA-TTCATGATAGATGTGCTGAAGTTGGCT-CAAATTCCTCAGATTTTT 897
||||| | |||| || ||||||| ||||||||||| | | |||| ||||||| |||||
Sbjct 920 GTTCAAAA-ATTAATTAATGATAGTTGTGCTGAAGT-GAATTCAAACTCCTCAGCTTTTT 977
Query 898 GGGTAATGGTAGCAGCACTCAAGGAGTTTATTTCAAATGAAGGTGGTGGGGAGCCACCAC 957
|||| |||||||| || || ||||||||| ||| ||||||||||||||| ||| |||| |
Sbjct 978 GGGTGATGGTAGCGGCTCTGAAGGAGTTTGTTTTAAATGAAGGTGGTGGAGAGGCACCCC 1037
Query 958 TTGAAGGTTCCATGCCTGATATGATATCTTCCACAGAGCACTACATCAATTTGCAGAAAA 1017
|||||||||| || || ||||||| ||||| ||||| ||||| ||||||||||||||||
Sbjct 1038 TTGAAGGTTCTATACCAGATATGACCTCTTCAACAGAACACTATATCAATTTGCAGAAAA 1097
Query 1018 TCTACC-ATTCCAAAGCTGAAGCTGATTTTCTT-TCCATGGAGCAGA-GAGT-AAAAAGC 1073
|||| | ||||||| || |||||||||||| || || ||| | | |||| ||||| |
Sbjct 1098 TCTATTTAG-CCAAAGCCGAGGCTGATTTTCTTGTC-ATTGAGGA-ACGAGTTAAAAA-C 1153
Query 1074 ATTCTAGTTAAAGTTGGTC-AGGATCCAAGTAGCATCCCAAAATCAACTATCAAGATCTT 1132
||| || ||| | |||| || |||| || |||||||||||| |||| ||||||| |||
Sbjct 1154 ATTTTAAAGAAAATCGGTCGAG-ATCCGAGCAGCATCCCAAAACCAACAATCAAGAGCTT 1212
Query 1133 CTGCAAGAATGCAAGAAAACTTAAAGTCTGCAGATATCAAACGATAGAGGACGAGTTCAG 1192
||||||||||||||| ||||||||| | |||||||||| | | ||||||||||||||||
Sbjct 1213 CTGCAAGAATGCAAGGAAACTTAAATTGTGCAGATATCGTATGGTAGAGGACGAGTTCAG 1272
Query 1193 AAATCCTTCTGCAACAGAACTACATAAGTACTTGGCTGATGAGGATTACAGTAGTGCAAT 1252
||||||||||| ||| ||| | || ||||| || || || |||||||||||| |||||||
Sbjct 1273 AAATCCTTCTGTAACTGAAATTCAAAAGTATTTAGCGGACGAGGATTACAGTGGTGCAAT 1332
Query 1253 TGGATTTTATATTCTTCTTAGAGCTGTTGATAGATTTGCTGCGACCTATAAGAAGTTTCC 1312
||||||||||||||||||||||||| || ||||||||||| | |||||| ||||||||
Sbjct 1333 GGGATTTTATATTCTTCTTAGAGCTGCGGACAGATTTGCTGCCAACTATAACAAGTTTCC 1392
Query 1313 TGGACAGTTTGATGGATCAACTG-ATGATGACGCATCCC-AGTTAAAGACCATTGCCCTG 1370
||| |||||||||||| || || |||| ||| || | | ||||| || | |||| ||
Sbjct 1393 TGGGCAGTTTGATGGAGGAA-TGGATGAGGACATTTCTCGA-TTAAAAACTACTGCCTTG 1450
Query 1371 AGTCTTCTTAGCGAAATGGGTTGTGACGGCT-ATGTACTTA-AGGAAGAACTTTAT--AG 1426
|||||||||| ||| |||| ||| |||||| | ||||| || | || ||| || |
Sbjct 1451 AGTCTTCTTACCGACTTGGGCTGTAACGGCTCA-GTACTCCCAG-ATGACCTT-ATCCA- 1506
Query 1427 TGAGATGTGTAGATTTGGTGC-TGCAGAGATTCACGTGGTTGCTGC-TTTCATAGGAGGA 1484
|||||||||| | |||||||| | |||||||||| |||||| |||| ||| | ||||||
Sbjct 1507 TGAGATGTGTCGCTTTGGTGCCT-CAGAGATTCATGTGGTTTCTGCCTTTGTT-GGAGGA 1564
Query 1485 GTCGCATCTCAAGAAGTGATCAAGCTTATCACGAAGCAGTTTGTTCCCATGCTAGGAACT 1544
|||||||||||||||| ||||||||| |||| |||||||||||||| ||| | || |||
Sbjct 1565 ATCGCATCTCAAGAAGTCATCAAGCTTGTCACAAAGCAGTTTGTTCCGATGTTGGGGACT 1624
Query 1545 TTCATCTTCAACGGCATTGATCACAGGTCTCAGTCT-TTGAAATTATAAAAGATTCTT 1601
| ||||||||| ||||||||||||| |||||||| | |||||||| || ||||| |||
Sbjct 1625 TACATCTTCAATGGCATTGATCACAAGTCTCAGT-TATTGAAATTGTAGAAGAT-CTT 1680
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79618064370
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5