BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg933836 Length=1102 Score E Sequences producing significant alignments: (Bits) Value AT2G32645.1 | Symbols: | Domain of unknown function (DUF313) ... 765 0.0 AT2G27410.1 | Symbols: | Domain of unknown function (DUF313) ... 586 1e-166 > AT2G32645.1 | Symbols: | Domain of unknown function (DUF313) | chr2:13851667-13853343 REVERSE LENGTH=1376 Length=1376 Score = 765 bits (414), Expect = 0.0 Identities = 658/770 (85%), Gaps = 40/770 (5%) Strand=Plus/Plus Query 188 CGAGGCTAAGGAATACAAATCGGAAAAGGAGGAACCTAGGGTTTACTCAGGGCAAGTTAA 247 |||| ||||| || |||||||| ||||| |||||||||||||| ||||||||| ||||| Sbjct 171 CGAGACTAAGAAAGACAAATCGAAAAAGAAGGAACCTAGGGTTAACTCAGGGCGGGTTAA 230 Query 248 TATGGAGGAGGTGATGTACGAAGCTGTCGGAGAG-TG--GCTTGAGAGCCTCTTAGAACA 304 |||| ||||| |||||||||||| ||||| |||| || |||||| ||||||||||||| Sbjct 231 TATGCAGGAGTTGATGTACGAAGTTGTCGCAGAGTTGCCGCTTGACAGCCTCTTAGAACG 290 Query 305 TAGATCAATTACTTCCGTGAAACCAGTACTACAAAACCCTAATCCGGATTCAGAATCTTC 364 |||||||||||| | | || |||||| |||||||||||||||||||| | || || Sbjct 291 TAGATCAATTAC-T---T----CC-GTACTAGAAAACCCTAATCCGGATTCACAGTCGTC 341 Query 365 TATGTCATCTTGTGTCCGTCAGTCCAAGAAAAAACGTTGTTCCATTAACGTGGAAGAGAG 424 |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| Sbjct 342 TATGTCATCTTGTGTCAGTCAGTCCAAGAAAAAACGTTGTTCTGTTAAGGTGGAAGAGAG 401 Query 425 AAGTCGCAAGAAAAGCAAAACCGTTAGTCCTTTAGAGGTGGAACC-TATTCAAACGACTC 483 | ||| ||||||| ||||| ||||||||||||||||||| |||| ||||||||||||| Sbjct 402 ACGTCCCAAGAAAGGCAAAGTCGTTAGTCCTTTAGAGGTGCAACCAAATTCAAACGACTC 461 Query 484 C-CCCGGATTGGCTTTTGAACGTGATGAGGAGAGAAGAGAACGGCTACAATCCAAAGCTG 542 | ||| ||||||||||||||||| |||| | || | ||||| ||||||||||| |||||| Sbjct 462 CACCC-GATTGGCTTTTGAACGTTATGA-G-GA-ACGAGAATGGCTACAATCCGAAGCTG 517 Query 543 ATCTCAACGAGGCAACTGTATAACACTGATCTCGCCGAACTTCAAGCACGCCTCTC-AGT 601 |||||||||||| || ||| ||| ||||||||| || | ||||||| ||| | ||| Sbjct 518 ATCTCAACGAGGGAATTGTTTAAGTCTGATCTCGATAAAGGTAAAGCACGTCTC-CAAGT 576 Query 602 CCCTTTTAGGCAAGTGAAAACTCCGGACTTTTTGACAGAGGATGAGACAAGAA-AATTAC 660 |||||||| |||||||||||||||||||||||||||||||| |||||||||| | ||| Sbjct 577 CCCTTTTAACCAAGTGAAAACTCCGGACTTTTTGACAGAGGACGAGACAAGAATCA-TAC 635 Query 661 ATAG-AAATGCGATGAAGCTTTGTCCCCACGGTGTGAGTGTGGATTTGGTGGATCCT--A 717 || | |||||| |||||| || || | | |||||| |||| |||||||||||||| Sbjct 636 AT-GAAAATGCCATGAAGATTCGTGACGATGGTGTGCCTGTGAATTTGGTGGATCCTCGG 694 Query 718 ATCGGAAGAAGCATGAGCTTGAATTGAGGAAGTGGAAGATG-AGTGGAAACTGGAATTAT 776 || ||| ||||||| |||||| |||||||||||||||||| || ||||||||||||||| Sbjct 695 AT--GAATAAGCATGCGCTTGAGTTGAGGAAGTGGAAGATGAAG-GGAAACTGGAATTAT 751 Query 777 GTCTTTGTTAAAGGTTGGAAAAATGTGCTTGATGCTAATA-G-C---TT--T--AAGGAA 827 |||||||||||||||||||| |||||||||||||||| | | | || | |||||| Sbjct 752 GTCTTTGTTAAAGGTTGGAACGATGTGCTTGATGCTAACAAGTCGAATTCGTTTAAGGAA 811 Query 828 AAAGACGTCTATCCTCTCTGGTCTTTCCGATCTGGAACAGGAAAACTCTGTTTTGCTCTC 887 |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 812 AAAGACGTCTTTCCTCTCTGGTCTTTCCGATCTGGAACAGGCAAACTCTGTTTTGCTCTC 871 Query 888 ATCCCTAAAAATTCCAGCAAAGGCTCTACTTCGGGAGAATCTGGCCGTGG 937 | ||| |||||||||||||| ||||||||||| |||||||||||| |||| Sbjct 872 ACCCC-AAAAATTCCAGCAACGGCTCTACTTCAGGAGAATCTGGCAGTGG 920 > AT2G27410.1 | Symbols: | Domain of unknown function (DUF313) | chr2:11724427-11725419 REVERSE LENGTH=993 Length=993 Score = 586 bits (317), Expect = 1e-166 Identities = 520/615 (85%), Gaps = 26/615 (4%) Strand=Plus/Plus Query 301 AACATAGATCAATTACTTCCGTGAAACCAGTACT--ACAAAACCCTAATCCG-GATTCAG 357 |||| |||||||| ||||||||| |||||||||| ||||||||||||| || | || || Sbjct 21 AACAAAGATCAATCACTTCCGTGGAACCAGTACTACACAAAACCCTAAT-CGAGGTTTAG 79 Query 358 AATCTTCT-ATGTCATCTTGTG-T-C-CGTCAGTCC-AAGAAAAAACGTTGTTCCATTAA 412 || | ||| | || |||| || | | |||| |||| ||| |||||| || ||||||| Sbjct 80 AACCGTCTCCT-TCTTCTTATGTTACTCGTCGGTCCAAAG-AAAAAC---GTCCCATTAA 134 Query 413 CGTGGAAGAGAGAAGTCGCAAGAAAAGCAAAACCGTTAGTCCTTTAGAGGTGGAACCTAT 472 |||||| ||||||||| ||||||| |||||| | || |||||||||||| |||||| || Sbjct 135 TGTGGAAAAGAGAAGTCACAAGAAACGCAAAATCATTTGTCCTTTAGAGGAGGAACCCAT 194 Query 473 TCAAACGACTCCCCCGGATTGGCTTTTGAACGTGATGAGGAGAGAAGAGAACGGCTACAA 532 |||||| ||||| ||||| ||||| |||||||| |||||||||||||||||||| ||||| Sbjct 195 TCAAACAACTCCACCGGAGTGGCTCTTGAACGTCATGAGGAGAGAAGAGAACGGTTACAA 254 Query 533 TCCAAAGCTGATCTCAACGAGGCAACTGTATAACACTGATCTC-GCCGAACTTCAAGCAC 591 ||| ||| ||||||||||||||||||||||||| || |||||| ||| | |||||| Sbjct 255 TCCGAAGTTGATCTCAACGAGGCAACTGTATAAGACCGATCTCAAAAAAAC-TGAAGCAC 313 Query 592 GCCTCTCAGTCCCTTTTAGGCAAGTGAAAACTCCGGACTTTTTGACAGAGGATGAGACAA 651 | |||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||| Sbjct 314 GTCTCTCAGTTCCTTTTAAGCAGGTGAAAACTCCGGACTTTTTGACAGAGGACGAGACAA 373 Query 652 GAA-AATTACATAGA-AATGCGATGAAGCTTTGTCCCCACGGTGTGAGTGTGGATTTGGT 709 ||| | ||||| || ||||| |||||| || || | | |||||| |||| |||| || Sbjct 374 GAATCA-TACAT-GAGAATGCCATGAAGATTCGTGACAATGGTGTGCCTGTGAATTTCGT 431 Query 710 GGATCCTAATCGGAAGAAGCATGAGCTTGAATTGAGGAAGTGGAAGATGAGTGGAAACTG 769 ||||||| | | ||| ||||||| ||||||||||||||||||||| |||| |||||||| Sbjct 432 GGATCCTGAGCTGAATAAGCATGTGCTTGAATTGAGGAAGTGGAAAATGAAAGGAAACTG 491 Query 770 GAATTATGTCTTTGTTAAAGGTTGGAAAAATGTGCTTGATGC---TAATA-G--CTTTAA 823 || ||||||||||||||||||||||||||| ||||||||||| ||| | | ||||| Sbjct 492 GATTTATGTCTTTGTTAAAGGTTGGAAAAACGTGCTTGATGCTTGTAAGACGTTGTTTAA 551 Query 824 GGAAAAAGACGTCTATCCTCTCTGGTCTTTCCGATCTGGAACAGGAAAACTCTGTTTTGC 883 |||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 552 GGAAGACGACGTCTATCCTCTCTGGTCTTTCCGATCTGGAACAGGCAAACTCTGTTTTGC 611 Query 884 TCTCATCCCTAAAAA 898 ||||| ||||||||| Sbjct 612 TCTCACCCCTAAAAA 626 Score = 211 bits (114), Expect = 1e-53 Identities = 155/173 (90%), Gaps = 9/173 (5%) Strand=Plus/Plus Query 927 TCTGGCCGTGGAAACTCTCTTCCTCGAGGCGATGGCGCTTCTACTTCCAGTAAATCTGGT 986 |||||||||||||||||||||||| | || |||||||||||||||||| || |||||||| Sbjct 628 TCTGGCCGTGGAAACTCTCTTCCTGGCGGTGATGGCGCTTCTACTTCCGGTGAATCTGGT 687 Query 987 CAGGTACCATTAACCATTCCTCCTTCGCATCCGGAAAGAGATTCTAGCCACTCCGGCCAA 1046 ||||||||||| | || | ||| | ||||| |||| |||||||| ||||||||||| Sbjct 688 CAGGTACCATT----A--CC-CATTC-C-TCCGGCAAGATATTCTAGCAACTCCGGCCAA 738 Query 1047 GGCTGTTCAGGAGAGAGCAGCTCTAGTTCTTCCTAATCATAACTCTGCTTATT 1099 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 739 GGCTGTTCAGGAGAGAGCAGCTCTAGTTCTTCCTAATCATAACTCTGCTTATT 791 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54015786420 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5