BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg933950
Length=1488
Score E
Sequences producing significant alignments: (Bits) Value
AT2G33630.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 2252 0.0
> AT2G33630.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:14236833-14238793 REVERSE LENGTH=1620
Length=1620
Score = 2252 bits (1219), Expect = 0.0
Identities = 1398/1485 (94%), Gaps = 9/1485 (1%)
Strand=Plus/Plus
Query 10 agagagag-ag-ag-agaATGCATTTGAGTGAGAATGAAGGCGTCGAAGGCAACACCTTC 66
|||||||| || || | |||||||||||||||||||||||| |||||||| |||||||||
Sbjct 42 AGAGAGAGAAGAAGAAAAATGCATTTGAGTGAGAATGAAGGTGTCGAAGGTAACACCTTC 101
Query 67 GTGGTCACTGGAGGTCTTGGCTTCGTCGGTGCCGCTCTCTGTTTAGAGCTCGTTCGTCGT 126
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 102 GTGGTCACTGGAGGTCTTGGCTTCGTCGGTGCAGCTCTCTGCTTAGAGCTCGTTCGTCGT 161
Query 127 GGTGCTCGCCAAGTCCGCTCTTTTGACCTCCG-CAACTCTTCTCCTTGGTCCGATGACCT 185
|||||||||||||| ||||||||||||||||| | |||||||||||||||||||||| ||
Sbjct 162 GGTGCTCGCCAAGTTCGCTCTTTTGACCTCCGTC-ACTCTTCTCCTTGGTCCGATGATCT 220
Query 186 CAAAAACAGTGGCGTTCGCTGCATCCAAGGTGATGTGACGAAGAAAGGAGATGTGGATAA 245
|||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||
Sbjct 221 CAAAAACAGTGGCGTTCGCTGCATTCAAGGTGATGTGACTAAGAAACAAGATGTGGATAA 280
Query 246 GGCTCTAGATGGAGCTGACTGTGTTTTGCATCTTGCTTCTCATGGTATGTCTGGGAAAGA 305
||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 281 CGCTTTAGATGGAGCAGACTGTGTTTTGCATCTTGCTTCTTATGGTATGTCTGGGAAGGA 340
Query 306 GATGCTTCAGTTTGGTCGTTGTGACGAGGTTAACATAAACGGGACTTGTAATGTCTTGGA 365
|||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 341 GATGCTTCGGTTTGGTCGTTGTGATGAGGTTAACATCAACGGGACTTGTAATGTCTTGGA 400
Query 366 AGCTGCGTTTAAACATGAGATTACAAGAATTGTGTATGTCAGCACTTATAATGTTGTGTT 425
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 401 AGCTGCGTTTAAACATGAGATTACAAGAATTGTGTATGTTAGCACTTACAATGTTGTGTT 460
Query 426 TGGTGGTAAGGAGATTCTGAATGGTAATGAAGGTTTGCCGTATTTCCCTCTTGATGACCA 485
||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||
Sbjct 461 TGGTGGTAAAGAGATTCTCAATGGTAATGAAGGTTTGCCTTATTTCCCTCTTGATGATCA 520
Query 486 TGTTGATGCCGATGGTCGAAGTAAATCGATTGCAGAACAGTTGGTTCTCAAGAGTAATGG 545
||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 521 TGTTGATGCATATAGTCGAACTAAATCGATTGCAGAACAGTTGGTTCTCAAGAGTAATGG 580
Query 546 -CGGGCCTTTTAAGAATGGGGGCAAACGGATGTACACATGTGCAATTCGTCCAGCGGCTA 604
|| |||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct 581 TCGA-CCTTTTAAGAATGGAGGCAAACGGATGTATACATGTGCGATTCGTCCAGCGGCTA 639
Query 605 TATATGGACCTGGCGAAGATAGGCATCTTCCTAGGATAGTTAATCTAGCAAAGTTGGGTT 664
||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||
Sbjct 640 TATATGGACCTGGCGAAGATAGGCATCTTCCTAGGATTGTTACTCTAACAAAGTTGGGTT 699
Query 665 TGGCTCTCTTCAAGATCGGTGAACCGAGTGTCAAAACAGACTGGATTTATGTCGAAAACC 724
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 700 TGGCTCTCTTCAAGATCGGTGAACCGAGTGTCAAATCAGACTGGATTTATGTCGAAAACC 759
Query 725 TTGTCCTAGCAATCATCCTGGCAAGCATGGGACTCTTGGACGACATTCCTGGCAGAGAAG 784
||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||
Sbjct 760 TTGTCCTAGCAATCATCTTGGCAAGTATGGGACTCTTGGATGACATTCCTGGCAGAGAAG 819
Query 785 GACATCCCGTCGCTGCTGGTCAACCATATTTTGTCTCTGACGGTTCCCCAGTGAATACCT 844
|||| || || |||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 820 GACAACCTGTTGCTGCTGGTCAACCATATTTTGTCTCTGACGGTTACCCGGTGAATACCT 879
Query 845 TTGAGTTTCTACGTCCCTTACTAAAAAGTTTAGACTATGACCTGCCCAAGTTTACAATCT 904
|||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 880 TTGAGTTTCTGCGTCCTTTACTAAAAAGTTTAGACTATGACCTGCCCAAGTGTACAATCT 939
Query 905 CTGTACCTTTTGCACTGTCCTTGGGTAAGATCTTCCAAGGTGTCTACACTTTGCTATATC 964
||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 940 CTGTACCTTTTGCGCTGTCCTTGGGTAAGATCTTCCAAGGTTTCTACACTGTGCTATATC 999
Query 965 CATGGCTATCAAACAGCTGGTTACCACAGCCCCTTGTTCTTCCTGCTGAAGTCTACAAGG 1024
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 CATGGCTATCAAAGAGCTGGTTACCACAGCCCCTTGTTCTTCCTGCTGAAGTCTACAAGG 1059
Query 1025 TTGGTGTCACCCATTATTTCTCATATCTCAAAGCCAAGGAAGAGCTTGGATATGTTCCAT 1084
| ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1060 TCGGTGTTACCCATTATTTCTCATATCTTAAAGCCAAGGAGGAGCTTGGATATGTTCCAT 1119
Query 1085 TCAAGAGCTCCAAGGAAGGAATGGCTGCAACTATCTCATACTGGCAGGAAAGGAAACAGA 1144
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||
Sbjct 1120 TCAAGAGCTCCAAGGAAGGTATGGCTGCAACTATCTCATACTGGCAGGAAAGGAAGCGGA 1179
Query 1145 GATCTTTAGACGGTCCAACCATATTCACTTGGATAGCTGTTACACTAGGAATGTCAGCTC 1204
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||
Sbjct 1180 GATCTTTAGACGGTCCAACCATGTTCACTTGGATAGCTGTTACAATAGGAATGTCTGCTC 1239
Query 1205 TTTTTGCTGCGGGATGGTTACCCGACATAGGACCTGTGCCTTTCTTACGAGCCCTACACC 1264
|||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1240 TTTTTGCTGCCGGATGGTTACCCGACATAGGACCTGTGCCTTTCTTAAGAGCCATACACC 1299
Query 1265 TCTTCTTCTTCCGGACAATCACGATTGTGAAGGCTGTCTTCATCGTATCAGTGGTACTAC 1324
||||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||
Sbjct 1300 TCTTCTTTTTCCGGACAATCACGATTGTAAAGGCTGTCTTCATTGTAGCAGTGGTACTAC 1359
Query 1325 ATGTTGGAGAAGGAATCTATGCGTTGCTTT-TGGCTAAACGAGTCGACCCAGGAAACGCA 1383
|||||| ||||||||||||||||| | ||| ||||||||||||||||||||||||| |||
Sbjct 1360 ATGTTGCAGAAGGAATCTATGCGTGG-TTTCTGGCTAAACGAGTCGACCCAGGAAATGCA 1418
Query 1384 ATGGGCTGGTTCTTGCAAACCTGCGCTCTCGGGTTTTTCTCAATGCGGTTTTTATTGAAG 1443
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1419 ATGGGGTGGTTCTTGCAAACCAGCGCTCTCGGGTTTTTCTCAATGCGGTTTTTATTGAAG 1478
Query 1444 AGAGCCAAAGACCACCAGATTTAAAACCAGCCTTATTTTGATGTT 1488
||||| ||||| ||||||||||||| |||||||| ||||||||||
Sbjct 1479 AGAGCGAAAGAGCACCAGATTTAAACCCAGCCTTGTTTTGATGTT 1523
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73393196790
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5