BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg934005

Length=208
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G46290.3 | Symbols: KASI | 3-ketoacyl-acyl carrier protein s...   158    2e-38


> AT5G46290.3 | Symbols: KASI | 3-ketoacyl-acyl carrier protein 
synthase I | chr5:18774086-18776742 REVERSE LENGTH=1936
Length=1936

 Score =  158 bits (85),  Expect = 2e-38
 Identities = 93/97 (96%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  73    GGTGATGGAAAGCTTGGAACATGCGATGAGACGTGGTACTCTAATTGTAGCAGAATATCT  132
             |||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||
Sbjct  1010  GGTGATGGAAAGCTTGGAACATGCAATGAAACGTGGTGCTCCAATTGTAGCAGAATATCT  1069

Query  133   TGGAGGTGCTGTTAATTGTGATGCTCACCATATGACT  169
             |||||||||||||||||||||||||||||||||||||
Sbjct  1070  TGGAGGTGCTGTTAATTGTGATGCTCACCATATGACT  1106



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 9305749935


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5