BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934020
Length=2189
Score E
Sequences producing significant alignments: (Bits) Value
AT2G34220.1 | Symbols: MEE20 | Protein with domains of unknown ... 1543 0.0
AT2G34230.1 | Symbols: | Protein with domains of unknown funct... 1253 0.0
AT2G34240.1 | Symbols: | Protein with domains of unknown funct... 1240 0.0
> AT2G34220.1 | Symbols: MEE20 | Protein with domains of unknown
function (DUF627 and DUF629) | chr2:14450536-14453856 FORWARD
LENGTH=2973
Length=2973
Score = 1543 bits (835), Expect = 0.0
Identities = 1078/1191 (91%), Gaps = 34/1191 (3%)
Strand=Plus/Plus
Query 927 TGATTGGCCTGAAGTGAAGGAT-GAAGAGCGAAGGAAAA--TACTCAAACAGTTTGCTC- 982
|||||||||||||| ||| ||| | ||||| |||||| |||||||||||||||| |
Sbjct 1522 TGATTGGCCTGAAGCGAAAGATCG-CGAGCG--GGAAAACGTACTCAAACAGTTTGC-CG 1577
Query 983 AGGTTCTTAAATCTTCTTTCTG-TAATGACAA-TGATACTCTTTCATGTACCCTTTGGGA 1040
||||||| |||||||| || || || || || || ||||||||||||||||||||||||
Sbjct 1578 AGGTTCTAAAATCTTC-TTGTGCCAAGGAGAATTG-TACTCTTTCATGTACCCTTTGGGA 1635
Query 1041 CTGGTTGATAGATTACACAGAAAG-GAATCTGCAACTA-CTGGAAGTTCCTGGGAGCTAT 1098
|||||||| ||||||||||| ||| ||||||| ||||| |||| ||||||||||| ||||
Sbjct 1636 CTGGTTGAGAGATTACACAG-AAGAGAATCTGGAACTACCTGG-AGTTCCTGGGATCTAT 1693
Query 1099 CTTGATAAATGTGGCTTCTTTAAGAACCCTCAGTGCATCTGCTTCTTAGATCTTAAGCAC 1158
|||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1694 CTTGATCAATGTTGCTTCTTTAAGAACCCTCAATGCATCTGCTTCTTAGATCTTAAGCAC 1753
Query 1159 CTTGAACACATCCTCAAATATTTTAGACAGCTCACCACAGATGTTCGCGCGAGTTTAGTT 1218
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1754 CTTGAACACATCCTCAAGTATTTTAGACAGCTCACCACAGATGTTCGCGCGAGTTTAGTT 1813
Query 1219 CCAAAAGTAGTGAATT-GTTTCTGGAAAAACTCACGGGTCAAGGAAACAATCGGTCTTGA 1277
||||||||||||||| |||| ||| |||| || | ||||||||||| ||||| |||||
Sbjct 1814 CCAAAAGTAGTGAATCAGTTT-TGGGAAAATTCCCAGGTCAAGGAAAGAATCGACCTTGA 1872
Query 1278 G--AG-A-CTTACATT-TAATCTGCTTCTGGATGGGAGACTGCTGTGTGAAGAAGAGCTT 1332
| || | || || || ||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1873 GGGAGTAGCT-AC-TTATAATCTGCTTCTGGACAAGAGACTGCTGTATGAAGAAGAGCTT 1930
Query 1333 GAATCAGATAAGATAGGGACAGTAGAGCATTATAAATCCACTGCAATTTATGAGGATGTG 1392
||||| |||||||||||||||||||||||||||||||| || | |||| |||||||||
Sbjct 1931 GAATCGGATAAGATAGGGACAGTAGAGCATTATAAATCTACAGGGATTTTTGAGGATGTA 1990
Query 1393 ATGCCTAAGGGTGATAAGATCGTCTCTTGGATTCTTGACTGCCCAGAAATCGATCTGGAA 1452
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1991 ATGCCTAAGGGTGATAAAATCGTCTCTTGGATTCTTGACTGCCCAGAAATCGATCGGGAA 2050
Query 1453 TTTGTGTCTCAAATGGCAAACGGCTTACACAATCGTGAGATATGGTTAGCAGCTTTGAGA 1512
|||||||||||||||||||||||| |||||||| || || ||||||||||||||||||||
Sbjct 2051 TTTGTGTCTCAAATGGCAAACGGCGTACACAATAGTAAGCTATGGTTAGCAGCTTTGAGA 2110
Query 1513 ATAGTACGAG-GCATGGTTAGGAACAAGGAAAGCTACTATGATAAGAGACACAAGATGCT 1571
|||||||| | | || ||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 2111 ATAGTACG-GTGTGTGATTAGGAAAAAGGAAAGCTACTATGATAAGAGACGGAAGATGCT 2169
Query 1572 AACCTATGAGAAGATGTTGTGTGAGGCAGAGACCATTTGTGACAGAGAAGACACTAGAAA 1631
||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||| ||
Sbjct 2170 AACCTATGAGAAGATGTTGGGTGAGGCTGAGACGATTTGTGACAGAGAAGACACTAGGAA 2229
Query 1632 GAATGTTAATCAGCGGAGCACATATGAGTTTGCACTTCGAATGAAATGTGAGGAGCTTGT 1691
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 2230 GAATGTTAATCAGCGGAGCACATATGAGTCTGCACTTCGAATGAAATGTGAGGATCTTGT 2289
Query 1692 AGGTAAGCAAGATGATGATACAAAATGTTTCTTGACTGTTGTAAGAGATGTTTTTCAAAG 1751
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 2290 AGGTAAGCAAGATGATGATACAAAATGTTTCTTGAGTGTTGTAAGAGATGTTTTTGAAAG 2349
Query 1752 AAAAAGCTCTCCAAGTTTTGAAGTAT-CAGAAGATAAGGAGGAGTGTATATCCAAACTCT 1810
| |||||||||| || |||||||||| | ||||||||| | ||||||||||| ||||||
Sbjct 2350 ACAAAGCTCTCCGAGCTTTGAAGTATTC-GAAGATAAG-A--AGTGTATATCCGAACTCT 2405
Query 1811 CTACTACTGTCCCAAATGATGATGTTAAGAAAAGTCTGTGGACGCTAAAGAAATCTCTGA 1870
|| |||||||||| ||||||||||| || |||||||||| ||||||| |||||| ||||
Sbjct 2406 CTTCTACTGTCCCGAATGATGATGTGAAAAAAAGTCTGTTAACGCTAAGGAAATCACTGA 2465
Query 1871 A-GAAGAAGTTCCCTTTGATTGATTCGAAGATTTTGCGGAACAAGTCTGCGTACAAAAAG 1929
| || ||||||||||||||||||||| |||||||||| |||||| ||| ||||| |||||
Sbjct 2466 AAGA-GAAGTTCCCTTTGATTGATTCAAAGATTTTGCAGAACAAATCTACGTACGAAAAG 2524
Query 1930 CTAATATATGTATTCCCAAAGCTATCAGCAGTTGAGTATCGCTTGGTGGTCCTTCCGTTC 1989
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 2525 CTAATAGATGTATTCCCGAAGCTATCAGCAGTTGAGTATCGCTTGGTGGTCCTTCCATTC 2584
Query 1990 GTGAAGAAGTTCTTACAGGATAAACTGAAGAAAATGATGAAAACAAATAGCAGTTCAGTT 2049
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2585 GTGAAGAAGTTCTTACAGGATAAACTGAAGAAAATGATGAAAACAAACAGCAGTTCAGTT 2644
Query 2050 GCTGCAGGCGGTTCTGCTGAACGAAAACCTAAGAAGAGACATCTTTCAAAT 2100
|||||||| | |||||||||||| |||||||||||||||||||||| ||||
Sbjct 2645 GCTGCAGGAGATTCTGCTGAACGGAAACCTAAGAAGAGACATCTTTGAAAT 2695
Score = 726 bits (393), Expect = 0.0
Identities = 757/925 (82%), Gaps = 56/925 (6%)
Strand=Plus/Plus
Query 18 TACGATGATGACGAAGAGTTCAGAGGAAAGTGACGCCAGTAAAACAATAAAGAAGATCGT 77
||||||||||| ||||||| |||| |||||||| | | || ||| ||||||||
Sbjct 532 TACGATGATGATGAAGAGTACAGACGAAAGTGA----A--ACAA-AAT--GGAAGATCGA 582
Query 78 CGATGCAGCCGAACTTGCCAGAGACTTGTTG--CAAATTCAAGAAC-ACATTAAGGCTTT 134
|||||||||||||||||| |||||||| | | | || | | || |||| ||||||
Sbjct 583 CGATGCAGCCGAACTTGCTAGAGACTTCTGGCTCGAA--CGTG-ACGGCATTTCGGCTTT 639
Query 135 GGAATTAACCGAGAAAACGATTTCTGATCATGGGAATCACGAAA-GTTGCTTTTTTCATC 193
| ||||||| |||||||||||||||||||||||||||||||||| || ||| | ||| |
Sbjct 640 GAAATTAACAGAGAAAACGATTTCTGATCATGGGAATCACGAAAAGT-GCTCTAGTCACC 698
Query 194 ACGAACTGCAAGGTGATATCTTTTTTGTGCTAGCCACAGAAA-CAGATAACACTGACGTC 252
|||||||||||||||||||||| | || | ||| | ||||| ||||| |||| ||| ||
Sbjct 699 ACGAACTGCAAGGTGATATCTTCTATGCCCAAGCGA-AGAAAACAGATGACACCGACCTC 757
Query 253 AAATGCGTATACTTGTTTACTTCTGTCGATGCATATTCAATGGCTACTCTTCTGTGTCCT 312
|||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| ||||
Sbjct 758 AAATGCTTATACTTGTTTGCTTCTGTCGATGCGTATTCAATGGCTACTCTTCTGTCTCCT 817
Query 313 GACGCTTTGA----G-G-TCCTTTCGTGGCTATGCTCGTTCGATGATCCAGTTGGGTAAT 366
||||||||| | | |||||||||||||||||||||||| | ||| |||||||| ||
Sbjct 818 AACGCTTTGACTTTGAGGTCCTTTCGTGGCTATGCTCGTTCGCTAATCAAGTTGGGTGAT 877
Query 367 CAGCTTCGGATAAACCAGTTTTACAAGAAAGCTGTGACCAAAGCAAAACGGGGATTGTT- 425
||||||||||||||| ||||||| ||||||||||| |||||||||| | |||| |||
Sbjct 878 CAGCTTCGGATAAACAAGTTTTATGAGAAAGCTGTGTCCAAAGCAAAGCTGGGAATGTCC 937
Query 426 AGTAACG-CAACCTCAAGGACCGTATATGTCCCTAGTAGGCTATATTGTAGCCTTGG-AG 483
| ||||| || ||||||||| || || | | || |||||| || || || | |
Sbjct 938 A-TAACGTCA-CCTCAAGGAAAGTCTACGGA--TGGT-GGCTAT-TT-TA-CCAAGATAA 989
Query 484 -G-CAGAACTTCAGAATTTGATAGATCTTGCAACAAAAAAGATGCATGCGGCTGTGACTG 541
| ||||||||||||||| ||||||||||||||||| |||||||| ||| ||||| |||
Sbjct 990 AGACAGAACTTCAGAATTGGATAGATCTTGCAACAACGAAGATGCAGGCGACTGTGGCTG 1049
Query 542 TTTCTGATACAGGTACTATGGCTAATCAGATTGCAACGATAGAGAA-A-GATCCTTCTTT 599
||||||||| ||||||||||| |||||||| | ||| | | ||| | ||| |||||||
Sbjct 1050 TTTCTGATATAGGTACTATGGATAATCAGAAAG-AACC-TGGGGAAGAAGATACTTCTTT 1107
Query 600 TGATCGATTGAAGAACTTTTGGGTTAA-TCTGGATGACAAGACCAAAAGAGAA-TTTTTG 657
|||| |||||||||| |||||||||| | |||||||||||||||||| | || ||||||
Sbjct 1108 TGATAGATTGAAGAAGATTTGGGTTAAAT-TGGATGACAAGACCAAAATA-AACTTTTTG 1165
Query 658 GTAGTAGACTCTAGAAA-GCTTATAGACTATGTAGA-GAATAAGTATGGTAACA-AAGTG 714
|||||||||| | |||| |||||||| |||| || | || |||| |||| | | ||||
Sbjct 1166 GTAGTAGACTTT-GAAAAGCTTATAGGCTATATACAAGA-TAAGCATGGGA-CGGAAGTA 1222
Query 715 AAAGAAG-ATTTTGGGAAATGTGTATCCGTTGCCAATAATCTTCCATGGAGAGGATGGAA 773
||||| | | ||| ||||||| || || | ||||||||||||| ||||||| | |||||
Sbjct 1223 AAAGA-GCACTTTCAGAAATGTATACCCATCGCCAATAATCTTCGATGGAGATGTTGGAA 1281
Query 774 GTGCCACATTTGTTCTCAGGTAAACTACAGTTTTACAGATTGCCAGAGGCACATCTTAGA 833
||||||||||||||||||||| |||||| ||||||| |||||| ||| ||||||||||||
Sbjct 1282 GTGCCACATTTGTTCTCAGGTTAACTACTGTTTTACGGATTGCAAGATGCACATCTTAGA 1341
Query 834 TAACCATGTGCAAAATTTTGTACCCGA-TCCCAGTGGTCGTCCTAAGTGTGTAGATAAGG 892
||| |||||||| || | || ||| || | |||| ||||||||||||||| ||| ||
Sbjct 1342 TAATCATGTGCACAACTCTGAACCTGACTTT-AGTGCTCGTCCTAAGTGTGTGGATGAGA 1400
Query 893 TTTTGGCTGACATGATATGTTGTGG 917
||||||||||||||||||| |||||
Sbjct 1401 TTTTGGCTGACATGATATGCTGTGG 1425
> AT2G34230.1 | Symbols: | Protein with domains of unknown function
(DUF627 and DUF629) | chr2:14454639-14457173 FORWARD LENGTH=2355
Length=2355
Score = 1253 bits (678), Expect = 0.0
Identities = 1015/1170 (87%), Gaps = 53/1170 (5%)
Strand=Plus/Plus
Query 927 TGATTGGCCTGAAGTGAAG-GATGAAGAGCGAAGGAAA--ATACTCAAACAGTTTGCTCA 983
||||||||||| || | | |||||| |||| ||||| || |||||||||||| || |
Sbjct 987 TGATTGGCCTGTAGCG-GGTGATGAAAAGCG--GGAAACCATTCTCAAACAGTTTTCTGA 1043
Query 984 GGTTCTTAAATCTTCTTTCTGTAATGACAA-TGATACTCTTTCATGTACCCTTTGGGACT 1042
|||||||||| |||||| | || || || || ||||||||||||||||||||||||||
Sbjct 1044 GGTTCTTAAAGCTTCTTGCCCTAGGGAGAATTG-TACTCTTTCATGTACCCTTTGGGACT 1102
Query 1043 GGTTGATAGATTACACAGAAAG-GAATCTGCAACTA-CTGGAAG-TTCCTGGGAGCTATC 1099
||||||| |||||||||| ||| | ||||| | ||| |||| || |||| ||||||||||
Sbjct 1103 GGTTGATCGATTACACAG-AAGAGCATCTGGATCTACCTGG-AGTTTCC-GGGAGCTATC 1159
Query 1100 TTGATAAATGTGGCTTCTTTAAGAACCCTCAGTGCATCTGCTTCTTAGATCTTAAGCACC 1159
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1160 TTGATAAATGTAGCTTCTTTAAGAACCCTCAGTGCATCTGCTTCTTAGATCTTAAGCACC 1219
Query 1160 TTGAACACATCCTCAAATATTTTAGACAGCTCACCACAGATGTTCGCGCGAGTTTAGTTC 1219
|| |||||||||||||| | ||||| ||||||||||| ||||| |||| ||||| |||
Sbjct 1220 TTAAACACATCCTCAAAAAATTTAGCCAGCTCACCACTGATGTCCGCGAAAGTTTGGTTT 1279
Query 1220 CAAAAGTAGTGAATT-GTTTCTGGAAAAACTCACGGGTCAAGGAAACAATCGGTCTTGAG 1278
|||||||||||||| | | |||| |||| || | ||||||||||| | ||| |||||||
Sbjct 1280 CAAAAGTAGTGAATCAGCT-CTGGGAAAATTCCCTGGTCAAGGAAAGACTCGATCTTGAG 1338
Query 1279 AGACTTAC-A-TT-TAATCTGCTTCTGGATGGGAGACTGCTGTGTGAAGAAGAGCTTGAA 1335
||| || | || |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1339 GGACACACTAATTCTAATCTGCTTCTGGATAAGAGACTGCTGTGTGAAGAAGAGCTTGAA 1398
Query 1336 TCAGATAAGATAGG-GACAGTAGAGCATTATAAATCCACTG-CAATTTATGAGGATGTGA 1393
| ||| ||| | | |||||||||||||||| ||||||||| || |||||||||||||||
Sbjct 1399 TTGGATCAGA-ATGAGACAGTAGAGCATTATGAATCCACTGGCA-TTTATGAGGATGTGA 1456
Query 1394 TGCCTAAGGGTGATAAGATCGTCTCTTGGATTCTTGACTGCCCAGAAATCGATCTGGAAT 1453
||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||
Sbjct 1457 TGCCTAAGGGTGATAAGATAGTCTCTTGGATTCTTGACTGCCCAAAAATCGATAAGGAAT 1516
Query 1454 TTGTGTCTCAAATGGCAAA-----C---GG-CTTACACAATCGTGAGATATGGTTAGCAG 1504
|| |||||||||||||||| | || |||||||||||||||||||||||||||||
Sbjct 1517 TTATGTCTCAAATGGCAAAGGTGGCAAAGGGCTTACACAATCGTGAGATATGGTTAGCAG 1576
Query 1505 CTTTGAGAATAGTACGAGG-CATGGTTAGGAACAAGGAAAGCTACTATGATAAGAGACAC 1563
||||||||| |||| ||| | |||||||||| ||||||||||||||||||||| |||
Sbjct 1577 TTTTGAGAATCGTAC-AGGGCCTGGTTAGGAAAAAGGAAAGCTACTATGATAAGCGACGG 1635
Query 1564 AAGATGCTAACCTATGAGAAGATGTTGTGTGAGGCAGAGACCATTTGTGACAGAGAAGAC 1623
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1636 AAGATGCTAAGCTATGAGAAGATGTTGTGTGAGGTTGAGACCATTTGTGACAGAGAAGAC 1695
Query 1624 ACTAGAAAGAATGTTAATCAGCGGAGCACATATGAGTTTGCACTTCGAATGAAATGTGAG 1683
||||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||
Sbjct 1696 ACTAGGAAGAATGTTAATCAGCGGAGCACATATGAGTTTGCGCTTCGAACGGAATGTGAG 1755
Query 1684 GAGCTTGTAGGTAAGCAAGATGATGATACAAAATGTTTCTTGACTGTTGTAAGAGATGTT 1743
||||||||||||||||||||||| ||| ||||| ||||| ||||||||||| |||||||
Sbjct 1756 AAGCTTGTAGGTAAGCAAGATGATAATAGAAAATATTTCTGGACTGTTGTAAAAGATGTT 1815
Query 1744 TTTCAAAGAAAAA-GCTCTCCAAGT-TTTGAAGTATCAGAAGATAAGGAGGAGTGTATAT 1801
||| || || | || ||||| || |||| |||| |||||||| |||| |||||||
Sbjct 1816 TTTGTAA-AACTATGCCCTCCA-GTATTTGGCGTATTAGAAGATATGGAG---TGTATAT 1870
Query 1802 CCAAACTCTCTACTACTGTCCCAAATGATGATGTTAAGAAAAGTCTGTGGACGCTAAAGA 1861
||||||||||| |||||||| |||||||||| |||||||||||| ||| || | ||| ||
Sbjct 1871 CCAAACTCTCTGCTACTGTCTCAAATGATGAAGTTAAGAAAAGTATGTTGAGGTTAAGGA 1930
Query 1862 AATC-TCTGAA-GAAGAAGTTCCCTTTGATTGATTCGAAGATTTTGCGGAAC-AA-GTCT 1917
|||| | |||| || || ||||| |||||||||||| ||||||||||||||| || | |
Sbjct 1931 AATCGT-TGAAAGA-GATGTTCCTTTTGATTGATTCAAAGATTTTGCGGAACGAATG-CA 1987
Query 1918 GCGTACAAAAAGCTAATATATGTATTCCCAAAGCTATCAGCAGTTGAGTATCGCTTGGTG 1977
| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 1988 -CATACAAAAAGCTAATAGATGTATTCCCAAAGCTATCAGTTGTTGAGTATCGCTTGGTG 2046
Query 1978 GTCCTTCCG-TTCGTGAAGAAGTTCTTACAGGATAAACTGAAGAAA-ATGATGAAAACAA 2035
||||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||||
Sbjct 2047 GTCCTTCCGCTT-GTGAAGAAGTTCTTACAGGATAAACTGAA-AAAGATGATGGAAACAA 2104
Query 2036 ATAGCAGTTCAGTTGCTGCAGGCGGTTCTG 2065
|||||| ||||||||||||||| | |||||
Sbjct 2105 ATAGCAATTCAGTTGCTGCAGGAGATTCTG 2134
> AT2G34240.1 | Symbols: | Protein with domains of unknown function
DUF627 and DUF632 | chr2:14459157-14461802 FORWARD LENGTH=2316
Length=2316
Score = 1240 bits (671), Expect = 0.0
Identities = 831/909 (91%), Gaps = 8/909 (1%)
Strand=Plus/Plus
Query 22 ATGATGACGAAGAGTTCAGAGGAAAGTGACGCCAGTAAAACAATAAAGAAGATCGTCGAT 81
|||||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||
Sbjct 1 ATGATGACGAAGAGTTCAGATGAAAGTGACGACAGTGAAACAATAAAGAAGATCGAGGAA 60
Query 82 GCAGCCGAACTTGCCAGAGACTTGTT-GCAAATTCAAGAACACATTAAGGCTTTGGAATT 140
||||||||||||||||||||||| || | ||| |||| ||||||||||||||| ||
Sbjct 61 GCAGCCGAACTTGCCAGAGACTTTTTAG-AAAGAGGTGAACGCATTAAGGCTTTGGAGTT 119
Query 141 AACCGAGAAAACGATTTCTGATCATGGGAATCACGAAAGTTGCTTTTTTCATCACGAACT 200
||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||
Sbjct 120 AACCGAGAAAACGATTTCTGATCATAGGAATCACGAAAGTTGCTTTTCTCACCACGAACT 179
Query 201 GCAAGGTGATATCTTTTTTGTGCTAGCCACA-GAAACAGATAACACTGACGTCAAATGCG 259
||||||||||| |||||||| ||||||| | |||||||||||||| |||||||||||||
Sbjct 180 GCAAGGTGATACCTTTTTTGCGCTAGCC-TATGAAACAGATAACACCGACGTCAAATGCG 238
Query 260 TATACTTGTTTACTTCTGTCGATGCATATTCAATGGCTACTCTTCTGTGTCCTGACGCTT 319
||||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct 239 TATACTTGTTTGCTTCTGTCGATGCATATTCAGTGTCTATTCTTCTGTGTCCTGACGCTT 298
Query 320 TGAGGTCCTTTCGTGGCTATGCTCGTTCGATGATCCAGTTGGGTAATCAGCTTCGGATAA 379
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 299 TGAGGTCCTTTCGTGGCTATGCTCGTTCGATGATCCAGTTGGGTGATCAGCTTCGGATAA 358
Query 380 ACCAGTTTTACAAGAAAGCTGTGACCAAAGCAAAACGGGGATTGTTAGTAACGCAACCTC 439
|| ||||||| |||||||||| ||||||||||||| ||||| ||||||| ||||||||||
Sbjct 359 ACAAGTTTTATAAGAAAGCTGCGACCAAAGCAAAATGGGGAGTGTTAGTTACGCAACCTC 418
Query 440 AAGGACCGTATATGTCCCTAGTAGGCTATATTGTA-GCCTTGGAGGCAGAACTTCAGAAT 498
||||||||| | |||||| ||||||||| || | || ||| || |||||||| | |
Sbjct 419 AAGGACCGTGGACATCCCTATTAGGCTATAGTGAAAGC-TTGAAGACAGAACTTTATACG 477
Query 499 TTGATAGATCTTGCAACAAAAAAGATGCATGCGGCTGTGACTGTTTCTGATACAGGTACT 558
|| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 478 TTCATAGATCTTGCAACAAAGAAGATGCATGCGGCTGTGACTGTTTCCGATACAGGTACT 537
Query 559 ATGGCTAATCAGATTGCAACGATAGAGAAAGATCCTTCTTTTGATCGATTGAAGAACTTT 618
||||||||| ||| | ||||||| ||||||||||||||||||||| |||||||| ||||
Sbjct 538 TTGGCTAATCGGATGGTAACGATAAAGAAAGATCCTTCTTTTGATCTATTGAAGACCTTT 597
Query 619 TGGGTTAATCTGGATGACAAGACCAAAAGAGAATTTTTGGTAGTAGACTCTAGAAAGCTT 678
||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||
Sbjct 598 TGGGTTAATCTGGATGACAAGACCAAAAGAGAACTTTTGGTGGTAGATTCTAGAAAGCTT 657
Query 679 ATAGACTATGTAGAGAATAAGTATGGTAACAAAGTGAAAGAAGATTTTGGGAAATGTGTA 738
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 658 ATAGACTATGTAGAGAATAAGTATGTTGACAAAGTGAAAGAAGATTTTGGGAAATGTGTA 717
Query 739 TCCGTTGCCAATAATCTTCCATGGAGAGGA-TGGAAGTGCCACATTTGTTCTCAGGTAAA 797
||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| |
Sbjct 718 TCCGTTGCCAATAATCTTCGATGGAGAT-ACTGGAAGTGCCACATTTGTTCTCAGGTATA 776
Query 798 CTACAGTTTTACAGATTGCCAGAGGCACATCTTAGATAACCATGTGCAAAATTTTGTACC 857
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 777 CTACTGTTTTACAGATTGCCAGAGGCACATCTTAGATAACCATGTGCAAAAATTTGTACC 836
Query 858 CGATCCCAGTGGTCGTCCTAAGTGTGTAGATAAGGTTTTGGCTGACATGATATGTTGTGG 917
||||||||||| ||||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct 837 CGATCCCAGTGCTCGTCCTAAGTGTGTGGATAAGGTATTAGCTGACATGATATGTTGTGG 896
Query 918 AAAATGGGA 926
||||||||
Sbjct 897 GAAATGGGA 905
Score = 704 bits (381), Expect = 0.0
Identities = 491/544 (90%), Gaps = 7/544 (1%)
Strand=Plus/Plus
Query 927 TGATTGGCCTGAAG-TGAAGGATGAAGAGCGAAGGAAAATACTCAAACAGTTTGCTCAGG 985
|||||||||||||| | |||||||||||||| || |||||||||||||||||||||||||
Sbjct 993 TGATTGGCCTGAAGCT-AAGGATGAAGAGCGGAGTAAAATACTCAAACAGTTTGCTCAGG 1051
Query 986 TTCTTAAATCTTCTTTCTGTAATGACAATGATACTCTTTCATGTACCCTTTGGGACTGGT 1045
||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 1052 TTCTTAAATCTTC--T-TGTAATGAAAATGATACTCTTTCATGTACCCTTTGGGACTCGT 1108
Query 1046 TGATAGATTACACAGAAAGGAATCTGCAACTACTGGAAGTTCCTGGGAGCTATCTTGATA 1105
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1109 TGATATATTACACAGAAAGGAATCTGCAACTACTTGAAGTTCCTGGGAGCTATCTTGATA 1168
Query 1106 AATGTGGCTTCTTTAAGAACCCTCAGTGCATCTGCTTCTTAGATCTTAAGCACCTTGAAC 1165
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1169 AATGTAGCTTCTTTAAGAACCCTCAGTGCATCTGCTTCTTAGATCTTAAGCACCTTGAAC 1228
Query 1166 ACATCCTCAAATATTTTAGACAGCTCACCACAGATGTTCGCGCGAGTTTAGTTCCAAAAG 1225
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1229 ACATCCTCAACTATTTTAGACAGCTCACCACAGATGTCCGCGCGAGTTTAGTTCCAAAAG 1288
Query 1226 TAGTGAATTGTTTCTGGAAAAACTCACGGGTCAAGGAAACAATCGGTCTTGAGAGACTTA 1285
|||||||| | |||||| |||| || ||||||||||||||||||||| ||||| ||||||
Sbjct 1289 TAGTGAATAGGTTCTGGGAAAATTCCCGGGTCAAGGAAACAATCGGTATTGAGCGACTTA 1348
Query 1286 CATTTAATCTGCTTCTGGATGGGAGACTGCTGTGTGAAGAAGAGCTTGAATCAGATAAGA 1345
||| |||||||||||| |||||||||||||||||||||||||||| | | | ||| | |
Sbjct 1349 CATCTAATCTGCTTCTTGATGGGAGACTGCTGTGTGAAGAAGAGCATCATTTTGATGACA 1408
Query 1346 TAGGGACAGTAGAG-CATTATAAATCCACTGCAATTTATGAGGATGTGATGCCTAAGGGT 1404
||||| |||||| | || ||| |||| || |||||||||| ||||||| ||| ||||
Sbjct 1409 CAGGGAGTGTAGAGACTTT-TAAGTCCAGTGGAATTTATGAGCATGTGATACCTGAGGGG 1467
Query 1405 GATAAGATCGTCTCTTGGATTCTTGACTGCCCAGAAATCGATCTGGAATTTGTGTCTCAA 1464
|| ||||| ||||| ||| |||| |||||||||||||| ||| | || |||||||||||
Sbjct 1468 GACAAGATGGTCTCCTGGGTTCTCGACTGCCCAGAAATGGATGAGAAACTTGTGTCTCAA 1527
Query 1465 ATGG 1468
||||
Sbjct 1528 ATGG 1531
Score = 411 bits (222), Expect = 2e-113
Identities = 417/506 (82%), Gaps = 33/506 (7%)
Strand=Plus/Plus
Query 1540 GAAAGCTACTATGATAAGAGACACAAG-ATGCTAACCTATGAGAAGATGTTGTGTGAGGC 1598
||||||||||||||||||||||| || ||| |||||||||| ||||||||| |||||||
Sbjct 1540 GAAAGCTACTATGATAAGAGACA-TAGAATGGTAACCTATGATAAGATGTTGGGTGAGGC 1598
Query 1599 AGAGACCATTTGTGACAGAGAAGACACTAGAAAGAATGTTAATCAGCGGAGCACATATGA 1658
|| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1599 TGAAACCATTTGTAACAGAGAAGACAATAGGAAGAATGTTAATCAGCGGAGCACATATGC 1658
Query 1659 GTTTGCACTTCGAATGAAATGTGAGGAGCTTGTAG-G-TAAGCAAGATGATGATACAAAA 1716
|| || || |||||||| |||||||||||||||| | || |||||||||||||| |||
Sbjct 1659 GTCAGCGCTGCGAATGAAGTGTGAGGAGCTTGTAGTGATA--CAAGATGATGATACCAAA 1716
Query 1717 TGTTTCTTGACTGTTGTAAGAGATGTTTTTCAAAGAAAAAGCT-CTCCAAGTTTTGAAGT 1775
|||||||||| |||||||||||||||| || ||||| | || |||||| | ||||||
Sbjct 1717 TGTTTCTTGAATGTTGTAAGAGATGTTCTTGAAAGAGCAC-CTTCTCCAAAATATGAAGT 1775
Query 1776 ATCAGAA-GATAA-G-G-A---GGAGTGTATATCCAAACTCTCTACTACTGTCCCAAATG 1828
|| | | || || | | | |||| ||||||| || |||||| |||| | |||||
Sbjct 1776 ATTA-ACCGACAAAGAGTATATGGAGAGTATATCTGGGCTATCTACTGCTGTTCAAAATG 1834
Query 1829 ATGAT-GTTA-AGAAAAGTCTGTGGACGCTAAAGAAA-TCTCTGA-AGAAGAAGTTCCCT 1884
| || |||| | ||||||||||||| |||| |||| | ||||| | |||||||||| |
Sbjct 1835 AC-ATTGTTATA-AAAAGTCTGTGGAAGCTAC-GAAAATTTCTGACA-AAGAAGTTCCAT 1890
Query 1885 TTGATTGATTCGAAGATTTTGCGGAAC-AAGTCTGCGTACAAA-A-AGCTAATATATGTA 1941
||||||||||| ||||| |||| |||| || | | | |||| | ||||| || | |
Sbjct 1891 TTGATTGATTCAAAGATATTGCTGAACGAATT-TAC--ACAAGGAGAGCTAC-AT--GAA 1944
Query 1942 TTCCCAAAGCTATCAGCAGTTGAGTATCGCTTGGTGGTCCTTCCGTTCGTGAAGAAGTTC 2001
|||||||||||||||||| ||||||||||| |||||||||||||||| ||||| |||||
Sbjct 1945 TTCCCAAAGCTATCAGCAATTGAGTATCGCATGGTGGTCCTTCCGTTTGTGAAAAAGTTT 2004
Query 2002 TTACAGGATAAACTGAAGAAAATGAT 2027
||||||| ||||||||||||||||||
Sbjct 2005 TTACAGGGTAAACTGAAGAAAATGAT 2030
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108583778835
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5