BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934063 Length=1309 Score E Sequences producing significant alignments: (Bits) Value AT2G34630.2 | Symbols: GPPS, GPS1 | geranyl diphosphate synthas... 2109 0.0 > AT2G34630.2 | Symbols: GPPS, GPS1 | geranyl diphosphate synthase 1 | chr2:14578540-14581727 FORWARD LENGTH=1513 Length=1513 Score = 2109 bits (1142), Expect = 0.0 Identities = 1247/1299 (96%), Gaps = 2/1299 (0%) Strand=Plus/Plus Query 12 ATTTAGAAAATGTTATTCTCGAGGAGTGTTGCTCGTATTTCTTCTAAGTTTCTGAGAAAC 71 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 141 ATTTAGAAAATGTTATTCACGAGGAGTGTTGCTCGGATTTCTTCTAAGTTTCTGAGAAAC 200 Query 72 CGTAGCTTCTATGGCTGCTCTCAATCTCTCGCCTCTCACCGCTTCGCAATCATTCCCGAT 131 |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||| Sbjct 201 CGTAGCTTCTATGGCTCCTCTCAATCTCTCGCCTCTCATCGGTTCGCAATCATTCCCGAT 260 Query 132 CAGGGTCACTCTTGTTCTGACTC-CACACACAAGGGTTACGTTTGCAGAACAACATATTC 190 ||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||| Sbjct 261 CAGGGTCACTCTTGTTCTGACTCTC-CACACAAGGGTTACGTTTGCAGAACAACTTATTC 319 Query 191 ATTGAAATCTCCCCTTTTTGGTGGATTTAGTCATCAACTCTATCACCAGAGCAGCTCCTT 250 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 320 ATTGAAATCTCCGGTTTTTGGTGGATTTAGTCATCAACTCTATCACCAGAGTAGCTCCTT 379 Query 251 AGTTGAGGAGGAGCTTGACCCATTTTCGCTTGTTGCCGATGAGCTGTCACTTCTTAGTAA 310 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 380 GGTTGAGGAGGAGCTTGACCCATTTTCGCTTGTTGCCGATGAGCTGTCACTTCTTAGTAA 439 Query 311 TAAGTTGAGAGAGATGGTAGTTGCCGAGGTTCCGAAGCTTGCCTCTGCAGCCGAGTACTT 370 ||||||||||||||||||| ||||||||||||| |||||||||||||| || |||||||| Sbjct 440 TAAGTTGAGAGAGATGGTACTTGCCGAGGTTCCAAAGCTTGCCTCTGCTGCTGAGTACTT 499 Query 371 CTTCAAAAGGGGTGTGCAAGGAAAACAGTTTCGTTCAACTGTTTTGCTGTTGATGGCGAC 430 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 500 CTTCAAAAGGGGTGTGCAAGGAAAACAGTTTCGTTCAACTATTTTGCTGCTGATGGCGAC 559 Query 431 AGCTCTGAATTTACGCGTACCAGAAGCATTGATTGGCGAATCAACAGATATAGTCTCATC 490 |||||||||| |||| || ||||||||||||||||| |||||||||||||||||| |||| Sbjct 560 AGCTCTGAATGTACGAGTTCCAGAAGCATTGATTGGGGAATCAACAGATATAGTCACATC 619 Query 491 AGAGTTACGAGTAAGGCAACGGGGTATTGCTGAAATCACTGAAATGATACATGTTGCAAG 550 ||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 620 AGAATTACGCGTAAGGCAACGGGGTATTGCTGAAATCACTGAAATGATACACGTCGCAAG 679 Query 551 TCTCCTGCACGATGATGTCTTGGATGATGCCGATACAAGGCGGGGTGTTGGTTCCTTAAA 610 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 680 TCTACTGCACGATGATGTCTTGGATGATGCCGATACAAGGCGTGGTGTTGGTTCCTTAAA 739 Query 611 TGTCGTAATGGGTAACAAGATGTCGGTATTAGCAGGAGACTTCTTGCTGTCCCGGGCTTG 670 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 740 TGTTGTAATGGGTAACAAGATGTCGGTATTAGCAGGAGACTTCTTGCTCTCCCGGGCTTG 799 Query 671 TGGGGCTCTCGCTGCCTTAAAGAACACAGAGGTTGTAGCATTACTTGCAACTGCTGTAGA 730 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 800 TGGGGCTCTCGCTGCTTTAAAGAACACAGAGGTTGTAGCATTACTTGCAACTGCTGTAGA 859 Query 731 ACATCTTGTTACTGGTGAAACCATGGAAATAACTAGTACAACCGAGCAGCGTTATAGTAT 790 |||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct 860 ACATCTTGTTACCGGTGAAACCATGGAGATAACTAGTTCAACCGAGCAGCGTTATAGTAT 919 Query 791 GGACTACTACATGCAAAAGACATATTATAAGACAGCATCACTAATTTCTAACAGCTGCAA 850 ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 920 GGACTACTACATGCAGAAGACATATTATAAGACAGCATCGCTAATCTCTAACAGCTGCAA 979 Query 851 AGCGGTTGCCGTTCTCACTGGACAAACAGCAGAAGTTGCCGTGTTAGCTTTTGAGTATGG 910 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 980 AGCTGTTGCCGTTCTCACTGGACAAACAGCAGAAGTTGCCGTGTTAGCTTTTGAGTATGG 1039 Query 911 GAAGAATCTGGGTTTAGCATTCCAATTGATTGACGACATTCTTGATTTCACGGGCACATC 970 || |||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 1040 GAGGAATCTGGGTTTAGCATTCCAATTAATAGACGACATTCTTGATTTCACGGGCACATC 1099 Query 971 TGCCTCTCTCGGAAAGGGATCTTTATCAGATATCCGCCATGGAGTCATAACAGCTCCAAT 1030 ||||||||||||||||||||| || |||||||| |||||||||||||||||||| ||||| Sbjct 1100 TGCCTCTCTCGGAAAGGGATCGTTGTCAGATATTCGCCATGGAGTCATAACAGCCCCAAT 1159 Query 1031 CCTCTTTGCCATGGAAGAGTTTCCTCAACTACGCGAAGTTGTTGATCAAGTTGAAAAAGA 1090 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1160 CCTCTTTGCCATGGAAGAGTTTCCTCAACTACGCGAAGTTGTTGATCAAGTTGAAAAAGA 1219 Query 1091 TCCAAGGAATGTTGACATTGCTTTAGAGTATCTTGGGAAGAGCAAGGGAATACAGAGGGC 1150 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1220 TCCTAGGAATGTTGACATTGCTTTAGAGTATCTTGGGAAGAGCAAGGGAATACAGAGGGC 1279 Query 1151 AAGAGAATTAGCCATGGAACATGCTAATCTCGCAGCAGCTGCAATAGGGTCTCTACCTGA 1210 |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct 1280 AAGAGAATTAGCCATGGAACATGCGAATCTAGCAGCAGCTGCAATCGGGTCTCTACCTGA 1339 Query 1211 AACAGACAATGAAGATGTCAAAAGATCGAGGCGGGCACTTATTGACTTGACCCATAGAGT 1270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1340 AACAGACAATGAAGATGTCAAAAGATCGAGGCGGGCACTTATTGACTTGACCCATAGAGT 1399 Query 1271 CCTCACCAGAAACAAGTGAGATTAAGAAATGTTTCTCTC 1309 | |||||||||||||||||||||||| |||||||||||| Sbjct 1400 CATCACCAGAAACAAGTGAGATTAAGTAATGTTTCTCTC 1438 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64407299235 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5