BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934072
Length=2624
Score E
Sequences producing significant alignments: (Bits) Value
AT2G34710.1 | Symbols: PHB, ATHB14, ATHB-14, PHB-1D | Homeobox-... 4311 0.0
AT1G30490.1 | Symbols: PHV, ATHB9 | Homeobox-leucine zipper fam... 2392 0.0
> AT2G34710.1 | Symbols: PHB, ATHB14, ATHB-14, PHB-1D | Homeobox-leucine
zipper family protein / lipid-binding START domain-containing
protein | chr2:14639323-14644273 REVERSE LENGTH=3064
Length=3064
Score = 4311 bits (2334), Expect = 0.0
Identities = 2474/2544 (97%), Gaps = 0/2544 (0%)
Strand=Plus/Plus
Query 73 ATACGATGAACAGAGAGTCGCCGGATAAAGGGTTGGATTCCGGCAAGTATGTGAGGTACA 132
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 309 ATATGATGAACAGAGAGTCGCCGGATAAAGGGTTAGATTCCGGCAAGTATGTGAGGTACA 368
Query 133 CACCGGAGCAAGTGGAAGCTCTCGAGAGAGTTTACACTGAGTGTCCTAAGCCCAGCTCTC 192
| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 369 CGCCGGAGCAAGTGGAAGCTCTCGAGAGAGTTTACACTGAGTGTCCTAAGCCAAGTTCTC 428
Query 193 TGAGAAGACAACAACTCATACGTGAATGTCCGATTCTCTCCAATATCGAGCCTAAGCAGA 252
| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 429 TAAGAAGACAACAACTCATACGTGAATGTCCGATTCTCTCTAACATCGAGCCTAAGCAGA 488
Query 253 TCAAAGTTTGGTTCCAGAACCGCAGATGTCGAGAGAAGCAGAGGAAAGAAGCTGCTCGCC 312
||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 489 TCAAAGTTTGGTTTCAGAACCGCAGATGTCGTGAGAAGCAGAGGAAAGAAGCTGCTCGTC 548
Query 313 TTCAAACAGTGAACAGAAAGCTCAATGCCATGAACAAACTCTTGATGGAAGAGAATGATC 372
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 549 TTCAAACAGTGAACAGAAAACTCAATGCCATGAACAAACTCTTGATGGAAGAGAATGATC 608
Query 373 GTTTGCAGAAGCAAGTTTCTCACTTGGTCTATGAGAATGGCCACATGAAACAGCAACTTC 432
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 609 GTTTGCAGAAGCAAGTTTCTAACTTGGTCTATGAGAATGGCCACATGAAACATCAACTTC 668
Query 433 ACACTTCTTCTGGGACGACCACAGACAACAGCTGTGAGTCTGTGGTCGTGAGTGGTCAGC 492
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 ACACTGCTTCTGGGACGACCACAGACAACAGCTGTGAGTCTGTGGTCGTGAGTGGTCAGC 728
Query 493 AACATCAACAGCAAAACCCAAATCCTCAGCATCAGCAACGTGATGCTAACAACCCAGCTG 552
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 729 AACATCAACAGCAAAACCCAAATCCTCAGCATCAGCAACGTGATGCTAACAACCCAGCAG 788
Query 553 GACTCCTTTCGATAGCAGAGGAGGCCCTAGCAGAGTTCCTTTCCAAGGCTACAGGAACTG 612
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 789 GACTCCTTTCTATAGCAGAGGAGGCCCTAGCAGAGTTCCTTTCCAAGGCTACAGGAACTG 848
Query 613 CTGTTGACTGGGTTCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGCATCGTCG 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 849 CTGTTGACTGGGTTCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGCATAGTCG 908
Query 673 CTATTTCGCGCAACTGCAGCGGAATTGCAGCACGTGCCTGCGGCTTCGTGAGTTTAGAAC 732
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 909 CTATTTCGCGCAACTGCAGCGGAATTGCAGCACGTGCCTGCGGCCTCGTGAGTTTAGAAC 968
Query 733 CCATGAAGGTTGCTGAAATCCTCAAAGATCGTCCATCTTGGCTCCGTGATTGTCGATGTG 792
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||
Sbjct 969 CCATGAAGGTTGCTGAAATTCTCAAAGATCGTCCATCTTGGCTCCGAGATTGTCGAAGTG 1028
Query 793 TGGATACTCTGAGTGTGATTCCTGCTGGAAATGGTGGGACTATTGAGCTTATTTACACGC 852
||||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||
Sbjct 1029 TGGATACTCTGAGTGTGATACCTGCTGGAAACGGTGGGACGATCGAGCTTATTTACACGC 1088
Query 853 AGATGTATGCCCCTACGACTTTAGCAGCAGCTCGTGACTTTTGGACACTGAGATATAGTA 912
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 1089 AGATGTATGCTCCTACGACTTTAGCAGCAGCTCGTGACTTTTGGACGCTGAGATATAGCA 1148
Query 913 CATGTTTGGAAGATGGAAGCTATGTGGTTTGTGAGAGGTCGCTTACTTCTGCAACTGGTG 972
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1149 CATGTTTGGAAGATGGAAGCTATGTGGTTTGTGAAAGGTCGCTTACTTCTGCAACTGGTG 1208
Query 973 GCCCCAGTGGGCCACCTTCTTCTAGCTTTGTGAGAGCTGAAATGCGACCAAGCGGGTTTC 1032
|||||| ||||||||||||||| | ||||||||||||||||||| ||||||||||||||
Sbjct 1209 GCCCCACTGGGCCACCTTCTTCAAACTTTGTGAGAGCTGAAATGAAACCAAGCGGGTTTC 1268
Query 1033 TTATCCGTCCTTGCGAGGGTGGTGGTTCCATTCTCCACATTGTTGATCATGTTGATCTGG 1092
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 TCATCCGTCCTTGCGATGGTGGTGGTTCCATTCTCCACATTGTTGATCATGTTGATCTGG 1328
Query 1093 ATGCCTGGAGTGTCCCTGAAGTCATGAGGCCTCTCTATGAATCATCGAAGATTCTTGCTC 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 ATGCCTGGAGTGTCCCTGAAGTCATGAGGCCTCTCTATGAATCATCGAAGATTCTTGCTC 1388
Query 1153 AGAAAATGACTGTTGCTGCTCTGAGACATGTAAGACAAATTGCACAAGAAACAAGTGGAG 1212
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1389 AGAAAATGACTGTTGCTGCTTTGAGACATGTAAGACAAATTGCACAAGAAACAAGTGGAG 1448
Query 1213 AAGTTCAGTATGGTGGAGGGCGCCAACCTGCGGTTTTAAGAACCTTCAGTCAAAGACTCT 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1449 AAGTTCAGTATGGTGGAGGGCGCCAACCTGCGGTTTTAAGAACCTTCAGTCAAAGACTCT 1508
Query 1273 GTCGGGGTTTCAATGATGCTGTTAATGGTTTTGTGGACGATGGATGGTCACCAATGGGTA 1332
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1509 GTCGGGGTTTCAATGATGCTGTTAATGGTTTTGTGGATGATGGATGGTCACCAATGGGTA 1568
Query 1333 GCGATGGTGCAGAGGATATTACTGTTATGATAAACTTGTCCCCTGGGAAGTTTTGTGGGT 1392
||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 1569 GCGATGGTGCAGAGGATGTTACTGTAATGATAAACTTGTCCCCTGGGAAGTTTGGTGGGT 1628
Query 1393 CTCAGTACGGTAATTCATTCCTTCCGAGCTTTGGTAGTGGCGTGCTTTGTGCCAAGGCAT 1452
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1629 CTCAGTACGGTAATTCATTCCTTCCAAGCTTTGGTAGTGGCGTGCTTTGTGCCAAGGCAT 1688
Query 1453 CGATGTTGCTTCAGAACGTTCCACCCGCTGTGCTGGTGCGATTCCTTAGAGAACACCGCT 1512
| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1689 CTATGTTGCTTCAGAACGTTCCACCCGCTGTGCTGGTTCGATTCCTTAGAGAACACCGAT 1748
Query 1513 CTGAATGGGCTGATTATGGTGTGGATGCTTATGCTGCTGCATCGCTCAGAGCAAGTCCTT 1572
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1749 CTGAATGGGCTGATTATGGCGTGGATGCTTATGCTGCTGCATCGCTCAGAGCAAGTCCTT 1808
Query 1573 TTGCTGTTCCTTGCGCTAGAGCTGGTGGGTTCCCGAGTAACCAAGTCATTCTTCCCCTTG 1632
||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct 1809 TTGCTGTTCCTTGTGCTAGAGCTGGGGGGTTCCCAAGTAACCAAGTCATTCTTCCTCTTG 1868
Query 1633 CGCAGACAGTTGAACATGAAGAGTCTCTTGAGGTGGTTAGACTTGAAGGTCACGCTTACT 1692
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1869 CGCAGACAGTTGAACATGAAGAGTCACTTGAGGTGGTTAGACTTGAAGGTCACGCTTACT 1928
Query 1693 CACCCGAAGACATGGGTTTAGCTCGGGATATGTATCTGCTACAGCTTTGTAGCGGTGTTG 1752
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1929 CACCCGAAGACATGGGTTTAGCTCGGGATATGTATTTGCTACAGCTTTGTAGCGGTGTTG 1988
Query 1753 ATGAAAATGTGGTTGGAGGTTGTGCACAGCTTGTCTTTGCGCCTATCGATGAATCATTTG 1812
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1989 ATGAAAATGTGGTTGGAGGTTGTGCACAGCTTGTATTTGCCCCTATCGATGAATCATTTG 2048
Query 1813 CTGATGATGCACCTTTGCTTCCTTCTGGTTTCCGCATCATACCTCTTGAACAGAAATCAA 1872
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 2049 CTGATGATGCACCTTTGCTTCCTTCCGGTTTCCGCATCATACCTCTTGAACAGAAATCTA 2108
Query 1873 CTCCGAACGGTGCATCTGCAAACCGTACCCTGGATTTAGCCTCAGCTTTAGAAGGATCCA 1932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2109 CTCCGAACGGTGCATCTGCAAACCGTACCCTGGATTTAGCCTCAGCTTTAGAAGGATCCA 2168
Query 1933 CACGTCAAGCAGGTGAAGCCGACCCAAATGGCTGTAACTTTAGGTCGGTACTAACCATAG 1992
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2169 CACGTCAAGCTGGTGAAGCCGACCCAAATGGCTGTAACTTTAGGTCGGTACTAACCATAG 2228
Query 1993 CATTCCAGTTCACATTTGATAACCATTCAAGAGACAGTGTTGCTTCAATGGCACGTCAGT 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2229 CATTCCAGTTCACATTTGATAACCATTCAAGAGACAGTGTTGCTTCAATGGCACGTCAGT 2288
Query 2053 ACGTTAGAAGCATAGTAGGATCGATTCAGAGGGTTGCTCTAGCCATTGCTCCTCGTCCTG 2112
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2289 ACGTGCGAAGCATAGTAGGATCGATTCAGAGGGTTGCTCTAGCCATTGCTCCTCGTCCTG 2348
Query 2113 GCTCCACTATCAGTCCAATCTCTGTTCCCACTTCCCCTGAAGCTCTCACTCTGGTCCGTT 2172
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2349 GCTCCAATATCAGTCCAATATCTGTTCCCACTTCCCCTGAAGCTCTCACTCTGGTCCGTT 2408
Query 2173 GGATCTCCCGGAGTTACAGCCTTCACACTGGTGCAGATCTCTTTGGATCTGATTCTCAAA 2232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2409 GGATCTCCCGGAGTTACAGCCTTCACACTGGTGCAGATCTCTTTGGATCTGATTCTCAAA 2468
Query 2233 CCAGTGGGGACACATTGCTGCATCAACTCTGGAATCACACTGATGCAATCTTGTGCTGCT 2292
||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2469 CCAGTGGTGACACGTTGCTGCATCAACTCTGGAATCACTCTGATGCAATCTTGTGCTGCT 2528
Query 2293 CCCTCAAAACAAACGCTTCACCGGTTTTCACATTCGCAAACCAAACCGGTTTAGACATGC 2352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2529 CCCTCAAAACAAACGCTTCACCGGTTTTCACATTCGCAAACCAAACCGGTTTAGACATGC 2588
Query 2353 TGGAAACGACTCTTGTAGCCCTTCAAGACATAATGCTAGACAAGACCCTTGACGAACCTG 2412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2589 TGGAAACGACTCTTGTAGCCCTTCAAGACATAATGCTAGACAAGACCCTTGACGAACCTG 2648
Query 2413 GTCGTAAAGCTCTTTGCTCTGAGTTCCCCAAGATCATGCAACAGGGCTATGCTCATCTTC 2472
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2649 GTCGTAAAGCTCTTTGCTCTGAGTTCCCCAAGATCATGCAACAGGGCTATGCTCATCTGC 2708
Query 2473 CGGCGGGAGTATGTGCGTCAAGCATGGGGAGGATGGTGTCTTACGAGCAGGCAACGGTGT 2532
|||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 2709 CGGCAGGAGTATGTGCGTCAAGCATGGGAAGGATGGTATCTTACGAGCAGGCAACGGTGT 2768
Query 2533 GGAAAGTTCTTGAAGACGATGAATCAAACCACTGCTTAGCTTTCATGTTCGTGAATTGGT 2592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2769 GGAAAGTTCTTGAAGACGATGAATCAAACCACTGCTTAGCTTTCATGTTCGTGAATTGGT 2828
Query 2593 CGTTCGTTTGAAGAATAAGAAGAA 2616
|||||||||||||||||| |||||
Sbjct 2829 CGTTCGTTTGAAGAATAATAAGAA 2852
Score = 86.1 bits (46), Expect = 2e-15
Identities = 46/46 (100%), Gaps = 0/46 (0%)
Strand=Plus/Plus
Query 1 CttttttttCTCACCATTATCTCATGAACGTGAGTGGAGGCTCTCT 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 CTTTTTTTTCTCACCATTATCTCATGAACGTGAGTGGAGGCTCTCT 175
> AT1G30490.1 | Symbols: PHV, ATHB9 | Homeobox-leucine zipper family
protein / lipid-binding START domain-containing protein
| chr1:10796135-10800961 REVERSE LENGTH=2936
Length=2936
Score = 2392 bits (1295), Expect = 0.0
Identities = 2144/2550 (84%), Gaps = 73/2550 (3%)
Strand=Plus/Plus
Query 84 AGAGAGTCGCCGGATAAAGGGTTGGATTCCGGCAAGTATGTGAGGTACACACCGGAGCAA 143
||||| || || |||||||| || |||||||||||||| || || ||||| ||||| |||
Sbjct 245 AGAGACTCTCCTGATAAAGGATTTGATTCCGGCAAGTACGTTAGATACACGCCGGAACAA 304
Query 144 GTGGAAGCTCTCGAGAGAGTTTACACTGAGTGTCCTAAGCCCAGCTCTCTGAGAAGACAA 203
|| |||||||| ||||||||||| ||||||||||||| || ||||||||||||||||||
Sbjct 305 GTTGAAGCTCTTGAGAGAGTTTATGCTGAGTGTCCTAAACCTAGCTCTCTGAGAAGACAA 364
Query 204 CAACTCATACGTGAATGTCCGATTCTCTCCAATATCGAGCCTAAG-CAGATCAAAGTTTG 262
|| || || ||||||||||| ||||||| || ||||||||| | ||||||||||||||
Sbjct 365 CAGCTTATTCGTGAATGTCCCATTCTCTGTAACATCGAGCCT-CGACAGATCAAAGTTTG 423
Query 263 GTTCCAGAACCGCAGATGTCGAGAGAAGCAGAGGAAAGAAG-CTGCTCGCCTTCAAACAG 321
||||||||| |||||||||||||||||||||||||||| || | ||||| ||||| ||||
Sbjct 424 GTTCCAGAATCGCAGATGTCGAGAGAAGCAGAGGAAAG-AGTCAGCTCGTCTTCAGACAG 482
Query 322 TGAACAGAAAGCTCAATGCCATGAACAAACTCTTGATGGAAGAGAATGATCGTTTGCAGA 381
||||||| ||||| | ||| |||||||| || ||||||||||||||||||||||||||||
Sbjct 483 TGAACAGGAAGCTGAGTGCTATGAACAAGCTTTTGATGGAAGAGAATGATCGTTTGCAGA 542
Query 382 AGCAAGTTTCTC-ACTTGGTCTATGAGAATGGCCACATGAAACAGC-AACTTCACACTTC 439
||||||| || | ||||||| ||||||||||| ||||||||| | || | |||||| |
Sbjct 543 AGCAAGTCTC-CAACTTGGTTTATGAGAATGGATTCATGAAACATCGAA-TCCACACTGC 600
Query 440 TTCTGGGACGACCACAGACAACAGCTGTGAGTCTGTGGTCGTGAGTGGTCAGCAACATCA 499
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 601 TTCTGGGACGACCACAGACAACAGCTGTGAGTCTGTGGTCGTGAGTGGTCAGCAACGTCA 660
Query 500 ACAGCAAAACCCAA-ATCCTCAGCATCAGCAACGTGATGCTAACAACCCAGCTGGA-CTC 557
||||||||||||| | | |||||||| || ||||||| ||||||||||||| | ||
Sbjct 661 GCAGCAAAACCCAACA-CATCAGCATCCTCAGCGTGATGTTAACAACCCAGCTA-ATCTT 718
Query 558 CTTTCGATAGCAGAGGAGGCCCTAGCAGAGTTCCTTTCCAAGGCTACAGGAACTGCTGTT 617
|| ||||| || |||||| || | || |||||||||| |||||||||||||||||||||
Sbjct 719 CTCTCGATTGCGGAGGAGACCTTGGCGGAGTTCCTTTGCAAGGCTACAGGAACTGCTGTC 778
Query 618 GACTGGGTTCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGCATCGTCGCTATT 677
|||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| ||
Sbjct 779 GACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGTATCGTAGCTGTT 838
Query 678 TCGCGCAACTGCAGCGGAATTGCAGCACGTGCCTGCGGCTTCGTGAGTTTAGAACCCATG 737
|| ||||||||||| ||||| |||||||||||||| ||| ||||||||||||||||||||
Sbjct 839 TCACGCAACTGCAGTGGAATAGCAGCACGTGCCTGTGGCCTCGTGAGTTTAGAACCCATG 898
Query 738 AAGGTTGCTGAAATCCTCAAAGATCGTCCATCTTGGCTCCGTGATTGTCGATGTGTGGAT 797
||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||
Sbjct 899 AAGGTCGCTGAAATCCTCAAAGATCGTCCATCTTGGTTCCGTGACTGTCGATGTGTCGAG 958
Query 798 ACTCTGAGTGTGATTCCTGCTGGAAATGGTGGGACTATTGAGCTTATTTACACGCAGATG 857
||||||| ||| || || ||||||||||||| ||||| |||||| | |||| |||||
Sbjct 959 ACTCTGAATGTTATACCCACTGGAAATGGTGGTACTATCGAGCTTGTCAACACTCAGATT 1018
Query 858 TATGCCCCTACGACTTTAGCAGCAGCTCGTGACTTTTGGACACTGAGATATAGTACATGT 917
||||| ||||| || |||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 1019 TATGCTCCTACAACATTAGCAGCAGCTCGTGACTTTTGGACGCTGAGATATAGTACAAGT 1078
Query 918 TTGGAAGATGGAAGCTATGTGGTTTGTGAGAGGTCGCTTACTTCTGCAACTGGTGGCCCC 977
| |||||||||||||||||||| |||||||| || || |||||||||||||||||||||
Sbjct 1079 CTAGAAGATGGAAGCTATGTGGTCTGTGAGAGATCACTCACTTCTGCAACTGGTGGCCCC 1138
Query 978 AGTGGGCCACCTTCTTCTAGCTTTGTGAGAGCTGAAATGC-GACCAAGCGGGTTTCTTAT 1036
| ||| |||| |||||| ||||| |||||||| |||||| | | |||||||||||||||
Sbjct 1139 AATGGTCCACTTTCTTCAAGCTTCGTGAGAGCCAAAATGCTGTC-AAGCGGGTTTCTTAT 1197
Query 1037 CCGTCCTTGCGAGGGTGGTGGTTCCATTCTCCACATTGTTGATCATGTTGATCT-GGATG 1095
||||||||| || ||||||||||||||| | ||||| ||||||||||| || || |||||
Sbjct 1198 CCGTCCTTGTGATGGTGGTGGTTCCATTATTCACATCGTTGATCATGTGGA-CTTGGATG 1256
Query 1096 CCTGGAGTGTCCCTGAAGTCATGAGGCCTCTCTATGAATCATCGAAGATTCTTGCTCAGA 1155
|| ||||| ||||||||| | |||||||| ||||| || || || || |||||||| |
Sbjct 1257 TCTCAAGTGTTCCTGAAGTCCTCAGGCCTCTTTATGAGTCTTCCAAAATCCTTGCTCAAA 1316
Query 1156 AAATGACTGTTGCTGCTCTGAGACATGTAAGACAAATTGCACAAGAAACAAGTGGAGAAG 1215
|||||||||| ||||||||||||||||| | |||||||| ||||| || ||||||||||
Sbjct 1317 AAATGACTGTCGCTGCTCTGAGACATGTGCGCCAAATTGCTCAAGAGACTAGTGGAGAAG 1376
Query 1216 TTCAGTATGGTGGAGGGCGCCAACCTGCGGTTTTAAGAACCTTCAGTCAAAGACTCTGTC 1275
| |||||| |||| || ||||| ||||| |||||||| || ||||| || |||||||| |
Sbjct 1377 TCCAGTATAGTGGTGGACGCCAGCCTGCAGTTTTAAGGACTTTCAGCCAGAGACTCTGCC 1436
Query 1276 GGGGTTTCAATGATGCTGTTAATGGTTTTGTGGACGATGGATGGTCACCAATGGGTAGCG 1335
||||||||||||||||||| ||||||||||| || ||||||||||| |||||| |||| |
Sbjct 1437 GGGGTTTCAATGATGCTGTAAATGGTTTTGTCGATGATGGATGGTCTCCAATGAGTAGTG 1496
Query 1336 ATGGTGCAGAGGATATTACTGTT-ATGATAAACT-TGTCCCCTGGGAAGTTTTG-TGGGT 1392
|||| | |||||||||||| | | ||||| |||| | ||| ||| || ||| | ||| |
Sbjct 1497 ATGGAGGAGAGGATATTAC-GATCATGATTAACTCT-TCCTCTGCTAAATTT-GCTGGCT 1553
Query 1393 CTCAGTACGGTAATTCATTCCTTCCGAGCTTTGGTAGTGGCGTGCTTTGTGCCAAGGCAT 1452
| || ||||||| ||||| ||||| || ||||| ||||| || || |||||||| || |
Sbjct 1554 CCCAATACGGTAGCTCATTTCTTCCAAGTTTTGGAAGTGGTGTCCTCTGTGCCAAAGCTT 1613
Query 1453 CGATGTTGCTT-CAGAACGTTCCACCCGCT-GTGCTGGTGCGATTCCTTAGAGAACACCG 1510
| ||| || || ||||| ||||||||| || || || | || ||||| |||||||||||
Sbjct 1614 CTATGCTG-TTGCAGAATGTTCCACCC-CTTGTATTGATTCGGTTCCTGAGAGAACACCG 1671
Query 1511 CTCTGAATGGGCTGATTATGGTGTGGATGCTTATGCTGCTGCATCGCTCAGAGCAAGTCC 1570
|||||||||| || |||||||| ||||| ||| |||||||||| |||||||||| |||
Sbjct 1672 AGCTGAATGGGCAGACTATGGTGTCGATGCCTATTCTGCTGCATCTCTCAGAGCAACTCC 1731
Query 1571 TTTTGCTGTTCCTTGCG-CTAGAGCTGGTGGGTTCCCGAGTAACCAAGTCATTCTTCCCC 1629
| ||||||||| |||| | ||| | |||||||||||||||||||||||||||||||| |
Sbjct 1732 ATATGCTGTTCCATGCGTC-AGAACCGGTGGGTTCCCGAGTAACCAAGTCATTCTTCCTC 1790
Query 1630 TTGCGCAGACAGTTGAACATGAAGAGTCTCTTGAGGTGGTTAGACTTGAAGGTCACGCTT 1689
| || |||||| | ||||||||||||| ||| || ||||||||||||| |||||| ||||
Sbjct 1791 TCGCACAGACACTCGAACATGAAGAGTTTCTCGAAGTGGTTAGACTTGGAGGTCATGCTT 1850
Query 1690 ACTCACCCGAAGACATGGGTTTAGCTCGGGATATGTATCTGCTACAGCTTTGTAGCGGTG 1749
||||||| ||||||||||| ||| | |||||||||||| | || |||||||||||||| |
Sbjct 1851 ACTCACCTGAAGACATGGGCTTATCCCGGGATATGTATTTACTGCAGCTTTGTAGCGGCG 1910
Query 1750 TTGATGAAAATGTGGTTGGAGGTTGTGCACAGCTTGTCTTTGCGCCTATCGATGAATCAT 1809
|||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct 1911 TTGATGAAAATGTGGTTGGAGGTTGTGCTCAGCTTGTCTTTGCCCCAATCGATGAATCAT 1970
Query 1810 TTGCTGATGATGCACCTTTGCTTCCTTCTGGTTTCCGCATCATACCTCTTGAACAGAAAT 1869
||||||||||||||||||||||||||||||||||||| ||||||| || || || |||
Sbjct 1971 TTGCTGATGATGCACCTTTGCTTCCTTCTGGTTTCCGTGTCATACCACTCGACCAAAAAA 2030
Query 1870 CAACTCCGAACGGTG--CA-TCTGCAAACCGTACCCTGGATTTAGCCTCAG-CTTTAGAA 1925
||| |||||| | | || ||||||| || || | |||| |||| || | | ||||
Sbjct 2031 CAAATCCGAATGATCATCAATCTGCAAGTCGAACACGGGATCTAGCATC-GTCCCTAGAT 2089
Query 1926 GGATCCACACGTCAAGCAGGTGAAGCCGACCCAAATGGCTGTA-ACTTTAGGTCGGTACT 1984
|| ||||| | || | | | | || |||| || || | || |||| | |
Sbjct 2090 GGTTCCAC-CAA-AACC-GATTC-G--GAAACAAA---CTCTAGA-TT--GGTC--T--T 2133
Query 1985 AACCATAGCATTCCAGTTCACATTTGATAACCATTCAAGAGACAGTGTTGCTTCAATGGC 2044
||| ||||| ||||||||||| |||||||||||||| ||||||| ||||||| |||||||
Sbjct 2134 AACAATAGCCTTCCAGTTCACGTTTGATAACCATTCCAGAGACAATGTTGCTACAATGGC 2193
Query 2045 -ACGTCAGTACGTTAG-AAGCATAGTAGGATCGATTCAGAGGGTTGCTCTAGCCATTGCT 2102
| | ||||| || || || | | || || ||||||||||| || |||||||||||| |
Sbjct 2194 GA-GACAGTATGTGAGGAA-CGTTGTTGGTTCGATTCAGAGAGTGGCTCTAGCCATTACG 2251
Query 2103 CCTCGTCCTGGCTCCACTATCAGTCCAATCTCTGTTCCCACTTCCCCTGAAGCTCTCACT 2162
|||||||||||||| | || | | || || | ||||||||||||||||||||||||
Sbjct 2252 CCTCGTCCTGGCTC-A--AT--G-C-AA-CT-T---CCCACTTCCCCTGAAGCTCTCACT 2299
Query 2163 CTGGTCCGTTGGATCTCCCGGAGTTACAGCCTTCACACTGGTGCAGATCTCTTTGGATCT 2222
|| |||||||||||| |||| |||||||| |||| || ||||||||||| |||||| ||
Sbjct 2300 CTTGTCCGTTGGATCACCCGTAGTTACAGTATTCATACAGGTGCAGATCTGTTTGGAGCT 2359
Query 2223 GATTCTCAAACCAGTGG-GGA--CACATTGCTGCATCAACTCTGGAATCACACTGATGCA 2279
|||||||| || |||| ||| ||||||||| | ||||||||| | || | ||||||
Sbjct 2360 GATTCTCAGTCCTGTGGAGGAGACACATTGCTTAAGCAACTCTGGGACCATAGTGATGCC 2419
Query 2280 ATCTTGTGCTGCTCCCTCAAAACAAACGCTTCACCGGTTTTCACATTCGCAAACCAAACC 2339
|| |||||||||||||| ||||| || || |||||||| |||||||| ||||||||| |
Sbjct 2420 ATATTGTGCTGCTCCCTGAAAACTAATGCCTCACCGGTATTCACATTTGCAAACCAAGCT 2479
Query 2340 GGTTTAGACATGCTGGAAACGACTCTTGTAGCCCTTCAAGACATAATGCTAGACAAGACC 2399
|||||||||||||| ||||| || ||||| || ||||| || |||||||| ||||| ||
Sbjct 2480 GGTTTAGACATGCTTGAAACTACACTTGTGGCACTTCAGGATATAATGCTCGACAAAACA 2539
Query 2400 CTTGACGAAC-CTGGTCGTAAAGCTCTTTGCTCTGAGTTCCCCAAGATCATGCAACAGGG 2458
||||| || | ||||||||| |||||||||||| |||||| ||||||||||||| |||||
Sbjct 2540 CTTGATGA-CTCTGGTCGTAGAGCTCTTTGCTCCGAGTTCGCCAAGATCATGCAGCAGGG 2598
Query 2459 CTATGCTCATCTTCCGGCGGGAGTATGTGCGTCAAGCATGGGGAGGAT-GGTGTCTTACG 2517
||||| |||||||||| ||| |||||| ||| |||||||| || | ||| || || |
Sbjct 2599 ATATGCGAATCTTCCGGCAGGAATATGTGTGTCGAGCATGGGCAG-ACCGGTTTCGTATG 2657
Query 2518 AGCAGGCAACGGTGTGGAAAGTTCTTGAAGACGATGAATCAAACCACTGCTTAGCTTTCA 2577
|||| || ||||||||||||||| |||| ||| | ||||||||||||||||| ||||| |
Sbjct 2658 AGCAAGCGACGGTGTGGAAAGTTGTTGATGACAACGAATCAAACCACTGCTTGGCTTTTA 2717
Query 2578 TGTTCGTGAATTGGTCGTTCGTTTGAAGAA 2607
|||| | ||||||||| |||||| |||
Sbjct 2718 CCCTCGTTAGTTGGTCGTTTGTTTGATGAA 2747
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 130283550971
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5