BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934177 Length=1033 Score E Sequences producing significant alignments: (Bits) Value AT2G35600.1 | Symbols: ATBRXL1, BRXL1 | BREVIS RADIX-like 1 | c... 1694 0.0 > AT2G35600.1 | Symbols: ATBRXL1, BRXL1 | BREVIS RADIX-like 1 | chr2:14940845-14945357 REVERSE LENGTH=1619 Length=1619 Score = 1694 bits (917), Expect = 0.0 Identities = 997/1035 (96%), Gaps = 8/1035 (1%) Strand=Plus/Plus Query 1 ACATAAAAAAGAGTGCAAAGATGTTTACTTGCATAAATTGTAC-AAAGATGGCAGACAGA 59 |||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||| Sbjct 357 ACATAAAAAAGAGTGCAAAGATGTTTACTTGCATAAATTGCACTAAA-ATGGCAGACAGA 415 Query 60 GGT---GAGGATGAAGAAGACGAAGCGCGTGGGAGCACCACTCCCAACACTAAAGAAGCC 116 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 416 GGTGAGGAGGATGAAGAAGATGAAGCGCGTGGGAGCACCACTCCCAACACTAAAGAAGCC 475 Query 117 GTTAAAAGCCTAACTACACAGATCAAAGACATGGCGTCGAAATTCTCAGGTACTCATAAA 176 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct 476 GTTAAAAGCCTAACTACACAGATCAAAGATATGGCGTCGAAATTCTCAGGTTCTCATAAA 535 Query 177 CAAAGCAAGCCAACTCCGGGCTCTTCGAGCAGCAACTTGAGGAAGTTCCCGGATTTTGAC 236 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 536 CAAAGCAAGCCAACTCCGGGCTCTTCGAGCAGCAACTTGAGGAAGTTTCCGGATTTTGAC 595 Query 237 ACTGCATCAGAAAGTGTTCCATACCCTTATCCGGGTGGAAGCACGAGTTCCACTCCGGCT 296 ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct 596 ACTGCATCAGAGAGTGTTCCATACCCTTATCCTGGTGGAAGCACGAGCTCCACTCCTGCT 655 Query 297 TGGGACTTACCAAGATCCTCATACCATCAATCTGGACGGCCAGACTCAAGATTTC-CATC 355 |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| Sbjct 656 TGGGACTTACCAAGATCCTCCTACCATCAATCTGGACGGCCAGACTCAAGA-TTCACATC 714 Query 356 AATGTATGGCGGTGAACGTGAATCCATCTCTGCTCAGTCGTGTGATGTGGTACTAGAAGA 415 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 715 AATGTATGGCGGTGAACGTGAATCCATCTCTGCTCAGTCGTGTGATGTGGTACTAGAGGA 774 Query 416 TGACGAGCCAAAGGAGTGGATGGCTCAAGTAGAGCCCGGTGTTCATATCACATTCGTCTC 475 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 775 TGACGAGCCAAAGGAGTGGATGGCTCAAGTAGAGCCTGGTGTTCATATCACATTTGTCTC 834 Query 476 ACTTCCCACTGGAGGAAATGATCTTAAACGGATACGTTTCAGCCGGGAAGTTTTCGACAA 535 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 835 ACTTCCCAGTGGAGGAAATGATCTTAAACGGATACGTTTCAGCCGGGAGGTTTTCGACAA 894 Query 536 GTGGCAGGCTCAAAGATGGTGGGGTGAGAACTACGACAGAATTGTTGAGCTTTACAATGT 595 |||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 895 GTGGCAGGCTCAGAGGTGGTGGGGTGAGAACTATGACAGAATAGTTGAGCTTTACAATGT 954 Query 596 TCAAAGATTTAACCGACAAGCTCTTCAAACTCCTGGTATATCCGAGGACCAGTCGCAGAG 655 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 955 TCAAAGATTTAACCGACAAGCTCTTCAAACTCCTGGTAGATCCGAGGACCAGTCGCAGAG 1014 Query 656 AGATTCAACTTACACAAGAATTGATTCAGCAAGAGAAAGCAGAGACTGGACACAAAGAGA 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1015 AGATTCAACTTACACAAGAATTGATTCAGCAAGAGAAAGCAGAGACTGGACACAAAGAGA 1074 Query 716 CAACAACTTCAGACCACCAGGAGGCAGTGTCCCACATCACTTTTATGGACCTCCAATGGA 775 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 1075 CAACAACTTCAGACCACCAGGAGGCAGTGTCCCTCATCATTTTTATGGACCTCCAATGGA 1134 Query 776 CGCAGCAAGAATCACCACCTCATCGAGGGACGACCCGCCTTCCATGAGTAATGCTAGTGA 835 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 1135 CGCAGCAAGAATCACCACCTCATCGAGGGACGAACCGCCTTCAATGAGTAATGCTAGTGA 1194 Query 836 AATGCAAGCTGAGTGGGTTGAAGAGGACGAGCCTGGTGTCTACATTACCATCAGACAGTT 895 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1195 AATGCAAGGTGAGTGGGTTGAAGAGGACGAGCCTGGTGTCTACATTACCATCAGACAGTT 1254 Query 896 ACCCGATGGAACCAGAGAACTACGCCGCGTCAGGTTCAGTCGGGAACGGTTTGGGGAAGT 955 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1255 ACCAGATGGAACTAGAGAACTACGCCGCGTCAGGTTCAGTCGGGAACGGTTTGGGGAAGT 1314 Query 956 GCATGCCAAGACATGGTGGGAGCAGAACAGAGATAGAATACAAACCCAATATCTCTAAGA 1015 |||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct 1315 GCATGCCAAGACATGGTGGGAGCAGAACAGGGACAGAATACAAACCCAATACCTCTAAGA 1374 Query 1016 GGACAAAAAA-GAGA 1029 |||||||||| |||| Sbjct 1375 GGACAAAAAACGAGA 1389 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50636020176 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5