BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934210
Length=1310
Score E
Sequences producing significant alignments: (Bits) Value
AT2G35840.1 | Symbols: | Sucrose-6F-phosphate phosphohydrolase... 2025 0.0
AT1G51420.1 | Symbols: ATSPP1, SPP1 | sucrose-phosphatase 1 | c... 1267 0.0
> AT2G35840.1 | Symbols: | Sucrose-6F-phosphate phosphohydrolase
family protein | chr2:15053623-15056005 FORWARD LENGTH=1542
Length=1542
Score = 2025 bits (1096), Expect = 0.0
Identities = 1223/1284 (95%), Gaps = 10/1284 (1%)
Strand=Plus/Plus
Query 13 TAGCAATCATGGAGCGGT-TAACATCTCCTCCTCGTCTGATGATTGTCTCGGATCTTGAT 71
||||||||||||||| || ||||||||||||||||| ||||||||||||| |||||||||
Sbjct 37 TAGCAATCATGGAGC-GTCTAACATCTCCTCCTCGTTTGATGATTGTCTCTGATCTTGAT 95
Query 72 CATACTATGGTTGATCATCATGATCCTGAGAATCTCTCTCTGTTGAGATTCAATTCGTTG 131
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct 96 CATACTATGGTTGATCATCATGATCCTGAGAATCTATCTCTGCTGAGATTCAATTCGTTG 155
Query 132 TGGGAACACGCTTATCGCCATGACTCTCTTCTTGTGTTCTCTACGGGAAGATCACCAACA 191
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 156 TGGGAACACGCTTATCGCCATGACTCTCTTCTTGTGTTTTCTACGGGAAGATCACCGACA 215
Query 192 TTGTATAAAGAATTGAGAAAGGAGAAACCTTTGCTT-ACCCCTGATATTACCATTATGTC 250
|||||||||||| | |||||||||||||||||| || |||||||||||||||||||||||
Sbjct 216 TTGTATAAAGAACTCAGAAAGGAGAAACCTTTG-TTGACCCCTGATATTACCATTATGTC 274
Query 251 TGTAGGAACTGAGATTATTTATGGTAACTCTATGGTTCCTGATCATGGTTGGGTTGAGAC 310
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 275 TGTAGGAACTGAGATTACTTATGGTAACTCTATGGTTCCTGATCATGGTTGGGTTGAGGC 334
Query 311 TTTGAACAATAAATGGGATTTGGGTATTGTCAAAGAAGAAGCTAGCAAGTTCCCTGAATT 370
| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||
Sbjct 335 TCTGAACAATAAATGGGATTTGGGTATTGTCAAACAAGAAGCTAGCAACTTCCCTGAGTT 394
Query 371 AAAGCTTCAGGCAGAAACTGAGCAGAGGCCACATAAGGTTAGCTTTTATGTTGACAAGAG 430
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 395 AAAGCTTCAGGCAGAAACTGAGCAGAGGCCACACAAGGTTAGCTTTTATGTTGAAAAGAG 454
Query 431 TAAGGCCCAGGAAGTGACTAAGGAGCTATCACAGCGGTTCCTGAAACATGGGTTGGATGT 490
|||||| |||||||| |||||||||||||||||| |||||||||||| |||| |||||||
Sbjct 455 TAAGGCTCAGGAAGTTACTAAGGAGCTATCACAGAGGTTCCTGAAACGTGGGCTGGATGT 514
Query 491 CAAGATAATTTACAGTGGAGGCATGGATTTGGATATTTTACCACAAGGTGCTGGAAAGGG 550
||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 515 CAAAATAATTTACAGTGGAGGTATGGATTTGGATATTTTACCACAAGGTGCCGGAAAGGG 574
Query 551 ACAAGCGCTTGCATATCTGCTGAAGAAGCTAAAGACTGAAGGGAAACTCCCTGTCAATAC 610
||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct 575 ACAAGCGCTTGCATATCTGCTGAAGAAACTGAAGACTGAGGGGAAACTCCCTGTCAATAC 634
Query 611 TCTTGCTTGTGGCGACTCTGGGAACGATGCTGAACTGTTTAGCATTCCGGATGTTTATGG 670
|||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||||
Sbjct 635 TCTTGCTTGTGGCGACTCTGGGAATGATGCTGAGCTGTTTAGTATTCCCGATGTTTATGG 694
Query 671 TGTCATGGTAAGCAATGCTCAGGAAGAGCTGTTGAAGTGGCATGCTGAGAATGCAAAAGA 730
||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 695 TGTTATGGTAAGCAATGCTCAAGAAGAGCTGTTGAAGTGGCATGCTGAAAATGCAAAAGA 754
Query 731 CAACCCGAAGGTAATCCATGCAAAGGAGAGGTGCGCGGGTGGGATTATACAAGCCATTGG 790
|||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 755 CAACCCTAAGGTAATCCATGCAAAGGAGAGGTGTGCAGGTGGGATTATACAAGCCATTGG 814
Query 791 TCACTTCAAGCTTGGTCCAAACCTTTCTCCAAGAGATGTCTCTGACTTT-TTAGAG-TGC 848
|||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| | |
Sbjct 815 TCACTTCAAGCTTGGTCCGAACCTTTCTCCAAGAGATGTCTCTGA-TTTCTTAGAGAT-C 872
Query 849 AAGGTGGAGAATGTGAACCCCGGTCACGAGGTTGTGAAGTTTTTCTTGTTCTACGAGAGA 908
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 873 AAGGTGGAGAATGTGAACCCTGGTCACGAGGTTGTGAAGTTTTTTTTGTTCTACGAGAGA 932
Query 909 TGGAGACGGGGCGAGGTTGAGAACTCTGAGGCATACACAGCAAGCCTCAAAGCTTCA-TC 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 933 TGGAGACGGGGCGAGGTTGAGAACTCTGAGGCATACACAGCAAGCCTCAAAGCTTCAGT- 991
Query 968 TCACCCCGGTGGTGTGTTCGTCCATCCATCTGGTACTGAAAAATCTCTGAGAGATACCAT 1027
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 992 TCACCCCGGTGGTGTGTTTGTCCATCCATCTGGTACTGAAAAATCTCTGAGAGATACCAT 1051
Query 1028 TGATGAGCTGCGCAAGTACCATGGAGACAAACAAGGGAAGAAGTTTCGGGTTTGGGCAGA 1087
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1052 CGATGAGCTGCGCAAGTACCATGGAGACAAACAAGGGAAGAAGTTTCGCGTTTGGGCAGA 1111
Query 1088 TCAAGTCCTGGCAACAGACACTACCCCTGGGACATGGATAGTAAAGCTTGATAAATGGGA 1147
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1112 TCAAGTCCTGGCAACAGACACTACTCCTGGGACATGGATAGTAAAGCTTGATAAATGGGA 1171
Query 1148 GCAAGATGGGGACGAACGCAGATGCTGCACAACGACTGTCAAATTCACCGCAAAGGAAGG 1207
|||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||
Sbjct 1172 GCAAGATGGGGACGAACGAAGATGCTGCACAACAACTGTCAAATTCACCTCAAAGGAAGG 1231
Query 1208 GGAAGGATTGGTGTGGGAACATGTACAACAAACCTGGTCGGAAGAATCAAAGGTGAAGGA 1267
||| |||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||
Sbjct 1232 GGAGGGATTGGTGTGGGAACATGTACAACAAACCTGGTCGAAAGAAACAATGGTGAAGGA 1291
Query 1268 TGATAGCAGCTGGATCATCTGAGT 1291
||||||||||||||||||||||||
Sbjct 1292 TGATAGCAGCTGGATCATCTGAGT 1315
> AT1G51420.1 | Symbols: ATSPP1, SPP1 | sucrose-phosphatase 1 |
chr1:19064768-19066704 REVERSE LENGTH=1356
Length=1356
Score = 1267 bits (686), Expect = 0.0
Identities = 1095/1291 (85%), Gaps = 33/1291 (3%)
Strand=Plus/Plus
Query 21 ATGGAGCGGTTAACATCTCCTCCTCGTCTGATGATTGTCTCGGATCTTGATC-ATACTAT 79
||||||||||||||||||||||||||||| ||||| ||||| |||||||| | | || ||
Sbjct 1 ATGGAGCGGTTAACATCTCCTCCTCGTCTAATGATAGTCTCCGATCTTGA-CGAAACCAT 59
Query 80 GGTTGATCATCAT---GATCCTGAGAATCTCTCTCTGTTGAGATTCAATTCGTTGTGGGA 136
||||||||||||| |||||||||||||| |||| ||||| || ||||| ||||||||
Sbjct 60 GGTTGATCATCATAAAGATCCTGAGAATCTAGCTCTATTGAGGTTTAATTCATTGTGGGA 119
Query 137 ACACGCTTATCGCCATGACTCTCTTCTTGTGTTCTCTACGGGAAGATCACCAACATTGTA 196
| |||||||||| || |||||||||||||| ||||| || |||||| | | |||| ||||
Sbjct 120 AGACGCTTATCGACACGACTCTCTTCTTGTTTTCTCAACAGGAAGAGCTCAAACAATGTA 179
Query 197 TAAAG-AATTGAGAAAGGAGAAACCTTTGCTT-ACCCCTGATATTACCATTA-TGTCTGT 253
||| || ||||||| |||||||||||| || ||||||||| ||| ||||| | |||||
Sbjct 180 -CAAGAAACTGAGAAAAGAGAAACCTTTG-TTAACCCCTGATGTTATCATTACT-TCTGT 236
Query 254 AGGAACTGAGATTA-TTTATGGTAACTCTATGGTTCCTGATCATGGTTGGGTTGAGACT- 311
||||||||||| || |||||||||||| |||||||||||| || ||||||||| | |
Sbjct 237 AGGAACTGAGA-TAGCTTATGGTAACTCAATGGTTCCTGATGATAATTGGGTTGA-AATC 294
Query 312 TTGAACAATAAATGGGATTTG-GGTATTGTCAAAGAAGAAGCTAGCAAGTTCCCTGAATT 370
||||| || |||||||| | || || ||| |||||||| | |||||||||||||| ||
Sbjct 295 TTGAATAAGAAATGGGA-CCGAGGAATCGTCCAAGAAGAAACCAGCAAGTTCCCTGAGTT 353
Query 371 AAAGCTTCAGGCAGAAACTGAGCAGAGGCCACATAAGGTTAGCTTTTATGTTGACAAGAG 430
|| ||||||| ||||| || ||||||||||| ||| |||||||| || ||||||||||
Sbjct 354 AACTCTTCAGGGTGAAACAGAACAGAGGCCACACAAGCTTAGCTTTAATATTGACAAGAG 413
Query 431 TAAGGCCCAGGAAGTGACTAAGGAGCTATCACAGCGGTTCCTGAAACAT-GGGTTGGATG 489
||||| ||| |||||| || |||||||| | |||||| ||||| | ||||| ||||
Sbjct 414 TAAGGTTAAGGCAGTGACGAAAGAGCTATCTCCGCGGTTAGAGAAACGTGGGGTT-GATG 472
Query 490 TCAAGA-TAATTTACAGTGGAGGCATGGATTTGGATATTTTACCACAAGGTGCTGGAAAG 548
|||| | | |||| ||||||||| | | ||| ||| ||||| || |||||| ||||||
Sbjct 473 TCAA-ATTCATTTTCAGTGGAGGAAACGCTTTCGATGTTTTAGCAAAAGGTGGAGGAAAG 531
Query 549 GGACAAGCGCTTGCATATCTGCTGAAGAAGCTAAAGACTGAAGGGAAA-CTCCCTGTCAA 607
|||||||| ||||| |||||||| |||||||| ||||||||| ||||| |||||| ||||
Sbjct 532 GGACAAGCTCTTGCTTATCTGCTAAAGAAGCTCAAGACTGAA-GGAAAGCTCCCTATCAA 590
Query 608 TACTCTTGCTTGTGGCGACTCTGGGAACGATGCTGAACTGTTTAGCATTCCGGATGTTTA 667
|||||||||||||| |||||||| || ||| ||||||| |||| |||||| |||||||
Sbjct 591 CACTCTTGCTTGTGGGGACTCTGGAAATGATACTGAACTATTTACCATTCCCAATGTTTA 650
Query 668 TGGTGTCATGGTAAGCAATGCTCAGGAAGAGCTGTTGAAGTGGCATGCTGAGAATGCAAA 727
|||||||||||||||||||||||| |||||| ||||| ||||| ||||||| ||||| ||
Sbjct 651 TGGTGTCATGGTAAGCAATGCTCAAGAAGAGTTGTTGGAGTGGTATGCTGAAAATGCGAA 710
Query 728 AGACAACCCGAAGGTAATCCATGCAAAG-GAGAGGTGCGCGGGTGGGATTATACAAGCCA 786
|||||| | || |||||||||| || |||||||| ||||||||||||| ||||||||
Sbjct 711 AGACAATGCAAATATAATCCATGC-GAGTGAGAGGTGTGCGGGTGGGATTACACAAGCCA 769
Query 787 TTGGTCACTTCAAGCTTGGTCCAAACCTTTCTCCAAGAGATGTCTCTGACTTTTTAGAGT 846
|||||||||| |||||||||||||| ||||||||||||||||| |||||||| || ||||
Sbjct 770 TTGGTCACTTTAAGCTTGGTCCAAATCTTTCTCCAAGAGATGTTTCTGACTTCTTGGAGT 829
Query 847 GCAAGGTGGAGAATGTGAACCCCGGTCACGAGGTTGTGAAGTTTTTCTTGTTCTACGAGA 906
|||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 830 GCAAGGCGGATAATGTGAACCCGGGTCATGAGGTTGTGAAGTTTTTCTTGTTCTACGAGA 889
Query 907 GATGGAGACGGGGCGAGGTTGAGAACTCTGAGG-CATACACAGCAAGCCTCAAAGCTTCA 965
|||||||||| || || |||||||||| | | | |||||||| |||| ||||||||||||
Sbjct 890 GATGGAGACGAGGTGAAGTTGAGAACTGT-ACGACATACACATCAAGTCTCAAAGCTTCA 948
Query 966 TCTCACCCCGGTGGTGTGTTCGTCCATCCATCTGGTACTGAAAAATCTCTGAGAGATACC 1025
| ||| || |||||| || || |||||||||||| ||||||| ||||| ||||| |||
Sbjct 949 TGTCATCCTTCTGGTGTCTTTGTTCATCCATCTGGTGCTGAAAAGTCTCTCAGAGACACC 1008
Query 1026 ATTGATGAGCT-GCGCAAGTACCATGGAGACAAACAAGGGAAGAAGTTTCGGGTTTGGGC 1084
||||||||||| | |||||||| ||||||||||| |||||||||||||||| |||||| |
Sbjct 1009 ATTGATGAGCTTG-GCAAGTACTATGGAGACAAAAAAGGGAAGAAGTTTCGTGTTTGGAC 1067
Query 1085 AGATCAAGTCCTGGCAACAGACACTACCCCTGGGACATGGATAGTAAAGCTTGATAAATG 1144
||||| ||| ||||||||||||| || || ||||| |||||||||||||||||||||||
Sbjct 1068 TGATCAGGTCTTGGCAACAGACACAACTCCAGGGACTTGGATAGTAAAGCTTGATAAATG 1127
Query 1145 GGAGCAAGA-TGGGGACGA-ACGCAGATGCTGCACAACGACTGTCAAATTCACCGCAAAG 1202
|||||| || |||||| || | | | ||| |||||||| ||||||||||||||| |||||
Sbjct 1128 GGAGCA-GACTGGGGATGAGAGGAA-ATGTTGCACAACAACTGTCAAATTCACCTCAAAG 1185
Query 1203 GAAGGGGAAGGATTGGTGTGGGAACATGTACAACAAACCTGGTCGGAAGAATCAAAGGTG 1262
||||| ||||| || |||||||||||||| || |||| |||||||| ||| || || |
Sbjct 1186 GAAGGAGAAGGGTTTGTGTGGGAACATGTGCAGCAAATATGGTCGGAGGAAACAGAGATT 1245
Query 1263 AAGGATGATAGCAGCTGGATCATCTGAGTCT 1293
||||||||||||| ||||||||||||| |||
Sbjct 1246 AAGGATGATAGCAACTGGATCATCTGAATCT 1276
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64457499780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5