BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934249
Length=1484
Score E
Sequences producing significant alignments: (Bits) Value
AT2G36250.1 | Symbols: FTSZ2-1, ATFTSZ2-1 | Tubulin/FtsZ family... 2420 0.0
AT3G52750.1 | Symbols: FTSZ2-2 | Tubulin/FtsZ family protein | ... 1123 0.0
> AT2G36250.1 | Symbols: FTSZ2-1, ATFTSZ2-1 | Tubulin/FtsZ family
protein | chr2:15197369-15200603 REVERSE LENGTH=1948
Length=1948
Score = 2420 bits (1310), Expect = 0.0
Identities = 1427/1483 (96%), Gaps = 10/1483 (1%)
Strand=Plus/Plus
Query 2 TCCTGCAGTGGTTGGTTTCAATATGGCAACTTACGTTTCACCGTGTTTCACTCCTTCGGA 61
|||||||||| ||||| ||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 198 TCCTGCAGTGATTGGTCTCATTATGGCAACTTACGTTTCACCGTGTTTTACTCCTTCGGA 257
Query 62 TTCTCGGTTGCTAACTGTTCTTAGAAAGAATGTATTACCGGAGAATCATTTAGGCAGGGT 121
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 258 TTCTCGGTTACTAACTGTTCTTAGAAAGAATGTTTTACCGGAGAATCATTTAGGCA-GGT 316
Query 122 T-AACTCCATTAGAATGATTGAGAGTAAGAAAAACCGAGTAGTTGCTGCTGCTGCTCAGA 180
| ||||||||||||| |||||| ||||||||||||||||| |||| | ||| |||||||
Sbjct 317 TGAACTCCATTAGAACGATTGACAGTAAGAAAAACCGAGTTGTTG-T--TGCCGCTCAGA 373
Query 181 AATCTGAATCTTCGCCAATCAGAAACTCTCCACGGCATTTCCAAAGCCAAGCTCAAGATC 240
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 374 AATCTGAATCTTCTCCAATCAGAAACTCTCCACGGCATTACCAAAGCCAAGCTCAAGATC 433
Query 241 CCTTCTTGAACCTTCACCCGGAAATATCGATGCTTAGAGGTGAAGGGACCAATACAATAG 300
| |||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||
Sbjct 434 CTTTCTTGAACCTTCACCCGGAAATATCTATGCTTAGAGGTGAAGGGACTAGTACAATAG 493
Query 301 TCAATCCAAGAAAGGAAACGTCTTCTGGACCTGTTACT-GAGGATTTTGAAGAGCCATCT 359
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 494 TCAATCCAAGAAAGGAAACGTCTTCTGGACCTGTT-GTCGAGGATTTTGAAGAGCCATCT 552
Query 360 GCTCCGAGTAACTACAATGAGGCGAGGATTAAAGTTATTGGTGTGGGAGGTGGTGGATCA 419
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 553 GCTCCGAGTAACTACAATGAGGCGAGGATTAAGGTTATTGGTGTGGGAGGTGGTGGATCA 612
Query 420 AATGCTGTGAATCGTATGATAGAGAGTGAAATGTCAGGCGTGGAGTTCTGGATTGTGAAC 479
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 613 AATGCTGTGAATCGTATGATAGAGAGTGAAATGTCAGGTGTGGAGTTCTGGATTGTCAAC 672
Query 480 ACTGATATCCAGGCTATGAGAATGTCTCCTGTTTTACCTGATAATAGGTTACAAATTGGT 539
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 673 ACTGATATCCAGGCTATGAGAATGTCTCCTGTTTTGCCTGATAATAGGTTACAAATTGGT 732
Query 540 AAGGAGTTGACTAGGGGTTTAGGTGCTGGAGGGAATCCAGAGATCGGTATGAATGCTGCT 599
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 733 AAGGAGTTGACTAGGGGTTTAGGTGCTGGAGGAAATCCAGAAATCGGTATGAATGCTGCT 792
Query 600 AGAGAGAGCAAAGAAGTTATTGAAGAGGCTCTCTATGGCTCAGATATGGTCTTTGTCACA 659
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 793 AGAGAGAGCAAAGAAGTTATTGAAGAAGCTCTTTATGGCTCAGATATGGTCTTTGTCACA 852
Query 660 GCTGGAATGGGTGGTGGAACTGGCACTGGTGCAGCCCCTGTAATTGCAGGAATTGCCAAG 719
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 GCTGGAATGGGCGGTGGAACTGGCACTGGTGCAGCCCCTGTAATTGCAGGAATTGCCAAG 912
Query 720 GCGATGGGTATATTGACAGTTGGCATTGCCACAACGCCTTTCTCGTTTGAGGGTCGAAGA 779
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 913 GCGATGGGTATATTGACAGTTGGTATTGCCACTACGCCTTTCTCGTTTGAGGGTCGAAGA 972
Query 780 AGAACGGTTCAGGCCCAAGAAGGGCTTGCATCTCTCAGAGACAATGTTGACACTCTCATC 839
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 973 AGAACTGTTCAGGCTCAAGAAGGGCTTGCATCTCTCAGAGACAATGTTGACACTCTCATC 1032
Query 840 GTCATTCCAAATGACAAGTTACTTACAGCTGTCTCTCAGTCTACTCCGGTAACGGAAGCA 899
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1033 GTCATTCCAAATGACAAGTTGCTTACAGCTGTCTCTCAGTCTACTCCGGTAACAGAAGCA 1092
Query 900 TTTAATCTAGCTGATGATATACTCCGTCAAGGGGTTCGTGGGATATCTGATATCATTACG 959
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1093 TTTAATCTAGCTGATGATATACTCCGTCAGGGGGTTCGTGGGATATCTGATATCATTACG 1152
Query 960 ATTCCTGGATTGGTGAATGTGGATTTTGCTGATGTGAGAGCTATAATGGCGAATGCGGGG 1019
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1153 ATTCCTGGTTTGGTGAATGTGGATTTTGCTGATGTGAGAGCTATAATGGCAAATGCGGGG 1212
Query 1020 TCTTCATTGATGGGAATAGGAACTGCAACAGGAAAGAGTCGGGCAAGAGATGCTGCTCTA 1079
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1213 TCTTCATTGATGGGAATAGGAACTGCGACAGGAAAGAGTCGGGCAAGAGATGCTGCGCTA 1272
Query 1080 AATGCGATCCAATCACCTTTGTTAGATATTGGGATTGAGAGAGCCACTGGAATTGTTTGG 1139
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1273 AATGCAATCCAATCTCCTTTGTTAGATATTGGGATTGAGAGAGCCACTGGAATTGTTTGG 1332
Query 1140 AACATTACTGGTGGAAGTGACTTGACATTGTTTGAGGTAAATGCTGCTGCGGAAGTAATA 1199
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1333 AACATTACTGGCGGAAGTGACTTGACATTGTTTGAGGTAAATGCTGCTGCAGAAGTAATA 1392
Query 1200 TATGATCTTGTCGATCCAACTGCCAATCTTATATTCGGTGCTGTTGTAGATCCAGCCCTC 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1393 TATGATCTTGTCGATCCAACTGCCAATCTTATATTCGGTGCTGTTGTAGATCCAGCCCTC 1452
Query 1260 AGCGGTCAAGTAAGCATAACCCTGATAGCTACGGGTTTCAAACGACAAGAAGAGGGAGAA 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1453 AGCGGTCAAGTAAGCATAACCCTGATAGCTACGGGTTTCAAACGACAAGAAGAGGGAGAA 1512
Query 1320 GGACGAGCGGTTCAGATGGCACAAGCAGATGCTGCGTCAGTTGGAGCTACAAGAAGACCC 1379
|||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1513 GGACGAACAGTTCAGATGGTACAAGCAGATGCTGCGTCAGTTGGAGCTACAAGAAGACCC 1572
Query 1380 TCTTCCTCCTTTAGAGAAAGCGGTTCAGTGGAGATCCCGGAGTTCTTGAAGAAGAAAGGC 1439
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1573 TCTTCTTCCTTTAGAGAAAGCGGTTCAGTGGAGATCCCAGAGTTCTTGAAGAAGAAAGGC 1632
Query 1440 AGCTCTCGTTATCCCCGAGTCTAA-GCCCGAA-CTAATCACTA 1480
|||||||||||||||||||||||| |||| || ||||||||||
Sbjct 1633 AGCTCTCGTTATCCCCGAGTCTAAAGCCC-AATCTAATCACTA 1674
> AT3G52750.1 | Symbols: FTSZ2-2 | Tubulin/FtsZ family protein
| chr3:19549661-19553014 REVERSE LENGTH=1773
Length=1773
Score = 1123 bits (608), Expect = 0.0
Identities = 982/1163 (84%), Gaps = 23/1163 (2%)
Strand=Plus/Plus
Query 301 TCAATCCAAGAAAGGAAACGTCTTCTGGACCTGTTACTGAGGATTTTGAAGAGCCATCTG 360
|||| |||||||| ||||| || || || ||||||||||||| || ||| ||||
Sbjct 434 TCAACCCAAGAAAAGAAACTTCCAGTGTTCCCATTACTGAGGATTTGGATGAGTTATCTA 493
Query 361 CTCCGAGTA-AC-TACAATGAGGCGAGGATTAAAGTTATTGGTGTGGGAGGTGGTGGATC 418
|||| | | || ||||||||||| |||||||||||||| || || ||||||||||| ||
Sbjct 494 CTCC-A-AACACTTACAATGAGGCTAGGATTAAAGTTATCGGCGTTGGAGGTGGTGGTTC 551
Query 419 AAATGCTGTGAATCGTATGATAGAGAGTGAAATG-TCAGGCGTGGAGTTCTGGATTGTGA 477
||| ||||||||||||||||| |||||||| ||| | || |||||||| ||||||||||
Sbjct 552 AAACGCTGTGAATCGTATGATTGAGAGTGAGATGAT-TGGTGTGGAGTTTTGGATTGTGA 610
Query 478 ACACTGATATCCAGGCTATGAGAATGTCTCCTGTTTTACCTGATAATAGGTTACAAATTG 537
| || |||||||| || |||||||| ||||| ||||| || || ||||||||||||||||
Sbjct 611 ATACCGATATCCAAGCAATGAGAATATCTCCGGTTTTTCCAGACAATAGGTTACAAATTG 670
Query 538 GTAAGGAGTTGACTAGGGGTTTAGGTGCTGGAGGGAATCCAGAGATCGGTATGAATGCTG 597
|||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct 671 GTAAGGAGTTGACTAGGGGTTTAGGTGCTGGAGGTAATCCAGAGATTGGGATGAATGCTG 730
Query 598 CTAGAGAGAGCAAAGAAGTTATTGAAGAGGCTCTCTATGGCTCAGATATGGTCTTTGTCA 657
||| ||| |||||||||| |||| |||| || || ||||| |||||||||||||||||||
Sbjct 731 CTACAGAAAGCAAAGAAGCTATTCAAGAAGCACTTTATGGTTCAGATATGGTCTTTGTCA 790
Query 658 CAGCTGGAATGGGTGGTGGAACTGGCACTGGTGCAGCCCCTGTAATTGCAGGAATTGCCA 717
|||||||||||||||||||||||||||| |||| || ||| |||||||||| |||| |
Sbjct 791 CAGCTGGAATGGGTGGTGGAACTGGCACAGGTGGTGCTCCTATAATTGCAGGGGTTGCAA 850
Query 718 AGGCGATGGGTATATTGACAGTTGGCATTGCCACAACGCCTTTCTCGTTTGAGGGTCGAA 777
| |||||||||||||| || ||||| |||| |||||||||||||| |||||||| || |
Sbjct 851 AAGCGATGGGTATATTAACGGTTGGTATTGTGACAACGCCTTTCTCATTTGAGGGACGGA 910
Query 778 GAAGAACGGTTCAGGCCCAAGAAGGGCTTGCATCTCTCAGAGACAATGTTGACACTCTCA 837
||||| | | ||||| || |||||| ||||| | |||||||| ||||||||||| ||||
Sbjct 911 GAAGAGCACTCCAGGCTCAGGAAGGGATTGCAGCCCTCAGAGATAATGTTGACACCCTCA 970
Query 838 TCGTCATTCCAAATGACAAGTTACTTA-CAGCTGTCTCTCAGTCTACTCCGGTAACGGAA 896
| || |||||||| ||||||||||| | |||| ||||||||||||||||| || || |||
Sbjct 971 TTGTTATTCCAAACGACAAGTTACT-AGCAGCAGTCTCTCAGTCTACTCCAGTTACAGAA 1029
Query 897 GCATTTAATCTAGCTGATGATATACTCCGTCAAGGGGTTCGTGGGATATCTGATATCATT 956
||||||||||| || ||||||||||| |||||||| || ||||| ||||||||||| |||
Sbjct 1030 GCATTTAATCTGGCAGATGATATACTTCGTCAAGGTGTCCGTGGAATATCTGATATTATT 1089
Query 957 ACGATTCCTGGATTGGTGAATGTGGATTTTGCTGATGTGAGAGCTATAATGGCGAATGCG 1016
||||||||||||||||| ||||||||||||||||||||||| || |||||||| |||||
Sbjct 1090 ACGATTCCTGGATTGGTCAATGTGGATTTTGCTGATGTGAGGGCGATAATGGCAAATGCA 1149
Query 1017 GGGTCTTCATTGATGGGAATAGGAACTGCAACAGGAAAGAGTCGGGCAAGAGATGCTGC- 1075
|| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1150 GGTTCTTCATTGATGGGAATAGGAACTGCAACAGGAAAGACCCGAGCAAGAGATGCTGCA 1209
Query 1076 TCTAAATGCGATCCAATCACCTTTGTTAGATATTGGGATTGAGAGAGCCACTGGAATTGT 1135
| |||| || |||||||| ||||| ||||||||||| |||||||||||||||||||| ||
Sbjct 1210 T-TAAACGCAATCCAATCCCCTTTATTAGATATTGGCATTGAGAGAGCCACTGGAATAGT 1268
Query 1136 TTGGAACATTACTGGTGGAAGTGACTTGACATTGTTTGAGGTAAATGCTGCTGCGGAAGT 1195
||||||||| || |||||||||||||| ||| |||| ||||||||||||||||| |||||
Sbjct 1269 TTGGAACATAACCGGTGGAAGTGACTTAACACTGTTCGAGGTAAATGCTGCTGCAGAAGT 1328
Query 1196 AATATATGATCTTGTCGATCCAACTGCCAATCTTATATTCGGTGCTGTTGTAGATCCAGC 1255
|| || || || || |||||||| || ||||||||||| |||||||| ||||||||| |
Sbjct 1329 GATTTACGACCTCGTTGATCCAACAGCGAATCTTATATTTGGTGCTGTGGTAGATCCATC 1388
Query 1256 CC-TCAGCGGTCAAGTAAGCATAACCCTGATAGCTACGGGTTTCAAACGACAAGAAGAGG 1314
| || |||||| |||| || ||||||||||| || || |||||||| |||||||| |
Sbjct 1389 TTAT-AGTGGTCAAATAAGTATTACCCTGATAGCAACTGGCTTCAAACGCCAAGAAGAAG 1447
Query 1315 GAGAAGGACGAG-CGG-TTCAGATGGCACAAGCAGATGCTGCGTCAGTTGGAGCTACAAG 1372
||||||| ||| | ||||| | ||||||| ||||| ||| | ||||| |||||
Sbjct 1448 GAGAAGG--GAGGCCACTTCAGGCGACACAAGCGGATGCA---TCAATGGGAGCCACAAG 1502
Query 1373 AAGACCCTCTTCCTCCTTTAGAGAAAGCGGTTC-AGTGGAGATCCCGGAGTTCTTGAAGA 1431
| | || || || || || | ||| || | || | | |||||||| |||||||| ||||
Sbjct 1503 ACGTCCTTCATCATCATTCACTGAAGGCAGCTCCA-TAGAGATCCCAGAGTTCTTAAAGA 1561
Query 1432 AGAAAGG-CAGCTCTCGTTATCC 1453
||||||| | ||||||| |||||
Sbjct 1562 AGAAAGGGC-GCTCTCGCTATCC 1583
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73192394610
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5