BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934288
Length=1628
Score E
Sequences producing significant alignments: (Bits) Value
AT2G36580.1 | Symbols: | Pyruvate kinase family protein | chr2... 2713 0.0
AT3G52990.1 | Symbols: | Pyruvate kinase family protein | chr3... 1953 0.0
> AT2G36580.1 | Symbols: | Pyruvate kinase family protein | chr2:15339122-15343086
FORWARD LENGTH=2020
Length=2020
Score = 2713 bits (1469), Expect = 0.0
Identities = 1578/1631 (97%), Gaps = 5/1631 (0%)
Strand=Plus/Plus
Query 1 TCTCCCAATTCCGATCAG-AAGCTATGCATTCGAGTCATCTCCTTCTCGAGGAACCGATC 59
||||| ||||| |||||| || |||||||||| |||||||||||||||||||||||||||
Sbjct 109 TCTCCGAATTCTGATCAGCAA-CTATGCATTCAAGTCATCTCCTTCTCGAGGAACCGATC 167
Query 60 AGGATGACTTCTATCCTTGAACCTTCCAAATCAAGTTTCTTCCCGGCTTTGACTAAGATT 119
||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 168 AGGATGACTTCAATCCTCGAACCTTCTAAATCAAGTTTCTTCCCGGCTTTGACTAAGATT 227
Query 120 GTTGGGACTCTAGGTCCGAAATCTCGATCCGTCGAGGTGATTTCTGGTTGTCTCAAAGCT 179
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 228 GTTGGGACTCTAGGTCCGAAATCTCGATCCGTCGAGGTGATTGCTGGTTGTCTCAAAGCT 287
Query 180 GGAATGTCAGTGGCTCGATTCGATTTCTCTTGGTGTGATGCAGAGTATCACCAGGAGACG 239
|||||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct 288 GGAATGTCCGTGGCTCGATTCGATTTCTCTTGGTGCGATGCTGATTATCACCAGGAGACG 347
Query 240 CTGGAGAATTTGAAGATAGCCGTGAAGAGCACTAAGAAGCTTTGTGCTGTTATGCTGGAC 299
||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 348 CTGGAGAATCTGAAGATAGCTGTGAAGAGCACTAAGAAGCTTTGTGCTGTTATGCTAGAC 407
Query 300 ACTGTGGGACCTGAGTTGCAAGTTATTAACAAGACTGAGAAAGCTATTTCTCTTAAGGCC 359
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 408 ACTGTAGGACCTGAGTTGCAAGTTATTAACAAGACTGAGAAAGCTATTTCTCTTAAAGCT 467
Query 360 GATGGCCTTGTAACTTTGACTCCGAGTCAAGACCAAGAAGCTTCCTCTGAAGTCTTTCCC 419
|||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||
Sbjct 468 GATGGCCTTGTAACTTTGACTCCGAGTCAAGATCAAGAAGCCTCCTCTGAAGTCCTTCCC 527
Query 420 ATTAATTTTGATGGGCTAGCCAAGGCAGTTAAGCAAGGAGACACTATCTTTGTTGGACAA 479
||||||||||||||| |||| ||||| |||||| ||||||||||||||||||||||||||
Sbjct 528 ATTAATTTTGATGGGTTAGCGAAGGCGGTTAAGAAAGGAGACACTATCTTTGTTGGACAA 587
Query 480 TACCTCTTCACTGGTAGTGAAACAACTTCAGTTTGGCTTGAGGTTGAAGAAGTTAAAGGA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 588 TACCTCTTCACTGGTAGTGAAACAACTTCAGTTTGGCTTGAGGTTGAAGAAGTTAAAGGA 647
Query 540 GATGATGTCATTTGTATTTCAAGGAATGCTGCTACTCTGGCTGGTCCGTTGTTCACATTG 599
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 648 GATGATGTCATTTGTATTTCAAGGAATGCTGCTACTCTGGGTGGTCCGTTATTCACATTG 707
Query 600 CACGTCTCTCAAGTTCACATTGATATGCCAACCCTCACTCAGAAGGATAAGGAGGTTATA 659
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 708 CACGTCTCTCAAGTTCACATTGATATGCCAACCCTAACTGAGAAGGATAAGGAGGTTATA 767
Query 660 AGTACATGGGGAGTTCAGAATAAGATCGATTTTCTCTCATTATCTTATTGTCGACATGCA 719
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 768 AGTACATGGGGAGTTCAGAATAAGATCGACTTTCTCTCATTATCTTATTGTCGACATGCA 827
Query 720 GAAGATGTTCGCCAGGCCCGTGAGTTGCTTAACAGTT-TGGGTGACCTCTCTCAAACACA 778
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 828 GAAGATGTTCGCCAGGCCCGTGAGTTGCTTAACAGTTGTGG-TGACCTCTCTCAAACACA 886
Query 779 AATATTTGCGAAGATTGAGAATGAAGAGGGACTGACCCACTTCGACGAAATTCTACAAGA 838
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 887 AATATTTGCGAAGATTGAGAATGAAGAGGGACTAACCCACTTTGACGAAATTCTACAAGA 946
Query 839 AGCAGATGGCATTATTCTTTCTCGTGGGAATTTGGGTATTGATCTACCTCCGGAAAAGGT 898
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 947 AGCAGATGGCATTATTCTTTCTCGTGGGAATTTGGGTATCGATCTACCTCCGGAAAAGGT 1006
Query 899 GTTTTTGTTCCAAAAGGCTGCTCTTTACAAGTGTAACATGGCTGGAAAGCCAGCCGTTCT 958
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1007 GTTTTTGTTCCAAAAGGCTGCTCTTTACAAGTGTAACATGGCTGGAAAGCCTGCCGTTCT 1066
Query 959 CACTCGTGTTGTAGACAGTATGACAGACAATCTCCGGCCAACTCGTGCAGAGGCAACTGA 1018
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1067 TACTCGTGTTGTAGACAGTATGACAGACAATCTGCGGCCAACTCGTGCAGAGGCAACTGA 1126
Query 1019 TGTTGCTAATGCTGTTTTAGATGGAAGTGATGCAATTCTTCTTGGTGCTGAGACTCTTCG 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1127 TGTTGCTAATGCTGTTTTAGATGGAAGTGATGCAATTCTTCTTGGTGCTGAGACTCTTCG 1186
Query 1079 TGGATTGTACCCTGTTGAGACCATATCAACTGTTGGTAGAATCTGTTGTGAGGCAGAGAA 1138
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1187 TGGATTGTACCCTGTTGAAACCATATCAACTGTTGGTAGAATCTGTTGTGAGGCAGAGAA 1246
Query 1139 AGTTTTCAACCAAGATTTGTTCTTCAAGAAGACTGTCAAGTATGTTGGAGAACCAATGAC 1198
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1247 AGTTTTCAACCAAGATTTGTTCTTTAAGAAGACTGTCAAGTATGTTGGAGAACCAATGAC 1306
Query 1199 TCACTTGGAATCTATTGCTTCTTCTGCTGTACGAGCAGCAATTAAGGTTAAAGCATCCGT 1258
||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct 1307 TCACTTGGAATCTATTGCTTCTTCTGCTGTACGGGCAGCAATCAAGGTTAAGGCATCCGT 1366
Query 1259 AATTATATGCTTCACCTCGTCTGGCAGAGCAGCGAGGTTGATTGCCAAATACCGTCCAAC 1318
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1367 AATTATATGCTTCACCTCGTCTGGCAGAGCAGCAAGGTTGATTGCCAAATACCGTCCAAC 1426
Query 1319 TATGCCCGTTCTCTCTGTTGTCATTCCCCGGCTTACAACAAATCAGCTGAAGTGGAGCTT 1378
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1427 TATGCCCGTTCTCTCTGTTGTCATTCCCCGACTTACGACAAATCAGCTGAAGTGGAGCTT 1486
Query 1379 TAGCGGGGCCTTTGAGGCAAGGCAGTCACTTATTGTCAGAGGTCTTTTCCCCATGCTTGC 1438
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1487 TAGCGGAGCCTTTGAGGCAAGGCAGTCACTTATTGTCAGAGGTCTTTTCCCCATGCTTGC 1546
Query 1439 TGACCCTCGTCACCCTGCGGAATCAACAAGTGCAACAAATGAGTCGGTTCTGAAAGTGGC 1498
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1547 TGATCCTCGTCACCCTGCGGAATCAACAAGTGCAACAAATGAGTCGGTTCTTAAAGTGGC 1606
Query 1499 TCTAGACCATGGGAAGCAAGCCGGAGTGATCAAGTCACATGACAGAGTTGTGGTCTGTCA 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1607 TCTAGACCATGGGAAGCAAGCCGGAGTGATCAAGTCACATGACAGAGTTGTGGTCTGTCA 1666
Query 1559 GAAAGTGGGTGATGCGTCCGTGGTCAAAATCATCGAGCTAGAGGATTAGAAGAAGCAGAG 1618
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1667 GAAAGTGGGAGATGCGTCCGTGGTCAAAATCATCGAGCTAGAGGATTAGAAGAAGCAGAG 1726
Query 1619 TGCGTC-TTGT 1628
|| ||| ||||
Sbjct 1727 TGAGTCGTTGT 1737
> AT3G52990.1 | Symbols: | Pyruvate kinase family protein | chr3:19648861-19652508
FORWARD LENGTH=2040
Length=2040
Score = 1953 bits (1057), Expect = 0.0
Identities = 1437/1620 (89%), Gaps = 28/1620 (2%)
Strand=Plus/Plus
Query 1 TCTC-CCAATTCCGATCA--GAAGCTATGCATTCGAGTCATCTCCTTCTCGAGGAACCGA 57
|||| ||| ||||| ||| |||| |||||||| |||||||| ||||||||||| ||||
Sbjct 163 TCTCTCCACTTCCG-TCACCGAAG--ATGCATTCCAGTCATCTTCTTCTCGAGGAGCCGA 219
Query 58 TCAGGATGACTTCTATCCTTGAACCTTCCAAATCAAGTTTCTTCCCGGCTTTGACTAAGA 117
|||||||| |||| ||||| || ||||||||||| |||||||||||||| ||||||||||
Sbjct 220 TCAGGATGGCTTCAATCCTCGAGCCTTCCAAATCTAGTTTCTTCCCGGCATTGACTAAGA 279
Query 118 TTGTTGGGACTCTAGGTCCGAAATCTCGATCCGTCGAGG-TGATTTCTGGTTGTCTCAAA 176
| || || ||||||||||| ||||| ||||||||||||| | | || || |||||||||
Sbjct 280 TCGTCGGAACTCTAGGTCCTAAATCCCGATCCGTCGAGGCT-CTCTCCGGCTGTCTCAAA 338
Query 177 GCTGGAATGTCAGTGGCTCGATTCGATTTCTCTTGGTGTGATGCAGAGTATCACCAGGAG 236
|| || ||||| ||||||||||| |||||||| ||| | ||||| || ||||||||||||
Sbjct 339 GCCGGCATGTCTGTGGCTCGATTTGATTTCTCGTGGGGAGATGCTGATTATCACCAGGAG 398
Query 237 ACGCTGGAGAATTTG-AAGATAGCCGTGAAGAGCACTAAGAAGCTTTGTGCTGTTATGCT 295
|| || || |||||| ||| | || |||| ||||||||||||||||||||||||||||||
Sbjct 399 ACACTTGATAATTTGAAAG-TTGCTGTGAGGAGCACTAAGAAGCTTTGTGCTGTTATGCT 457
Query 296 GGACACTGTGGGACCTGAGTTGCAAGTTATTAACAAGA-CTGAGAAAGCTATTTCTCTT- 353
|| ||||| ||||||||| | |||||||||||||| | |||||||||||||| || ||
Sbjct 458 TGATACTGTTGGACCTGAGCTACAAGTTATTAACAA-ATCTGAGAAAGCTATTACT-TTG 515
Query 354 AAGGCCGATGGCCTTGTAACTTTGACTCCGAGTCAAGACCAAGAAGCTTCCTCTGAAG-T 412
|| || |||||||||||||||||||| |||| |||||| ||||||||||| ||||||| |
Sbjct 516 AAAGCTGATGGCCTTGTAACTTTGACACCGAATCAAGATCAAGAAGCTTCTTCTGAAGTT 575
Query 413 CTTTCCCATTAATTTTGATGGGCTAGCCAAGGCAGTTAAGCAAGGAGACACTATCTTTGT 472
| ||||||||||||| |||| || ||||||||||| ||| |||||||||| ||||| ||
Sbjct 576 C-TTCCCATTAATTTCAATGGACTTGCCAAGGCAGTGAAGAAAGGAGACACCATCTTCGT 634
Query 473 TGGACAATACCTCTTCACTGGTAGTGAAACAACTTCAGTTTGGCTTGAGGTTGAAGAAGT 532
||| |||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 635 TGGGCAATACCTATTCACTGGTAGTGAAACAACTTCAGTTTGGCTCGAGGTTGATGAAGT 694
Query 533 TAAAGGAGATGATGTCATTTGTATTTCAAGGAATGCTGCTACTCTGGCTGGTCCGTTGTT 592
||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||
Sbjct 695 TAAAGGAGATGATGTCATTTGCCTTTCAAGGAATGCTGCTACTCTGGCTGGTTCTTTGTT 754
Query 593 CACATTGCACGT-CTCTCAAGTTCACATTGATATGCCAACCCTCACTCAGAAGGATAAGG 651
||| || ||| | ||||||||||||||||||| | ||||| || || ||||||||||||
Sbjct 755 CACTTTACAC-TCCTCTCAAGTTCACATTGATCTCCCAACGCTTACAGAGAAGGATAAGG 813
Query 652 AGGTTATAAGTACATGGGGAGTTCAGAATAAGATCGATTTTCTCTCATTATCTTATTGTC 711
|||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||
Sbjct 814 AGGTTATAAGCACATGGGGAGTTCAAAATAAAATCGATTTTCTCTCATTGTCTTATTGTC 873
Query 712 GACATGCAGAAGATGTTCGCCAGGCCCGTGAGTTGCTT-AACAGTTTGGGTGACCTCTCT 770
| ||||| || |||||||||||| ||||||| ||||| || || ||||| |||||||||
Sbjct 874 GTCATGCTGAGGATGTTCGCCAGACCCGTGAAATGCTTAAAAAG-TTGGGCGACCTCTCT 932
Query 771 CAAACACAAATATTTGCGAAGATTGAGAATGAAGAGGGACTGACCCACTTCGACGAAATT 830
||||||||||||||||| ||||||||||| | ||||||||| ||||||||||| || |||
Sbjct 933 CAAACACAAATATTTGCTAAGATTGAGAACGTAGAGGGACTAACCCACTTCGATGAGATT 992
Query 831 CTACAAGAAGCAGATGGCATTATTCTTTCTCGTGGGAATTTGGGTATTGATCTACCTCCG 890
||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| |||
Sbjct 993 CTACAAGAAGCTGATGGCATTATTCTTTCTCGTGGGAATTTGGGTATAGATTTACCCCCG 1052
Query 891 GAAAAGGTGTTTTTGTTCCAAAAGGCTGCTCTTTACAAGTGTAACATGGCTGGAAAGCCA 950
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1053 GAAAAGGTGTTTTTGTTTCAAAAGGCTGCTCTTTACAAGTGCAACATGGCTGGAAAGCCA 1112
Query 951 GCCGTTCTCACTCGTGTTGTAGACAGTATGACAGACAATC-TCCGGCCAACTCGTGCAGA 1009
|| ||||| || |||||||| ||||||||||| ||||| | | || ||||||||||| ||
Sbjct 1113 GCTGTTCTTACCCGTGTTGTTGACAGTATGACTGACAA-CTTGCGACCAACTCGTGCTGA 1171
Query 1010 GGCAACTGATGTTGCTAATGCTGTTTTAGATGGAAGTGATGCAATTCTTCTTGGTGCTGA 1069
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1172 GGCCACGGATGTTGCTAATGCTGTTTTAGATGGAAGTGATGCAATTCTTCTTGGTGCTGA 1231
Query 1070 GACTCTTCGTGGATTGTACCCTGTTGAGACCATATCAACTGTTGGTAGAATCTGTTG-TG 1128
||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| | ||
Sbjct 1232 GACCCTTCGTGGATTGTACCCTGTTGAGACAATATCAACTGTTGGTAGGATCTGT-GCTG 1290
Query 1129 AGGCAGAGAAAG-TTTTCAACCAAGATTTGTTCTTCAAGAAGACTGTCAAGTATGTTGGA 1187
||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||||
Sbjct 1291 AGGCAGA-AAAGGTTTTCAATCAAGATTTGTACTTTAAGAAGACTGTCAAGTATGTTGGA 1349
Query 1188 GAACCAATGACTCACTTGGAATCTATTGCTTCTTCTGCTGTACGAGCAGCAATTAAGGTT 1247
||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||
Sbjct 1350 GAACCAATGACTCACTTGGAATCGATTGCTTCTTCAGCTGTACGGGCAGCCATTAAGGTT 1409
Query 1248 AAAGCATCCGTAATTATATGCTTCACCTCGTCTGGCAGAGCAGCGAGGTTGATTGCCAAA 1307
|| |||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||
Sbjct 1410 AAGGCATCCGTAATTATATGCTTCACCTCTTCTGGAAGAGCAGCCAGATTGATTGCCAAA 1469
Query 1308 TACCGTCCAACTATGCCCGTTCTCTCTGTTGTCATTCCCCGGCTTACA-ACAAATCAGCT 1366
||| | ||||| ||||| ||| | |||||||||||||||||| ||| | |||||||| ||
Sbjct 1470 TACAGGCCAACGATGCCGGTTATTTCTGTTGTCATTCCCCGGGTTA-AGACAAATCAACT 1528
Query 1367 GAAGTGGAGCTTTAGCGGGGCCTTTGAGGCAAGGCAGTCACTTATTGTCAGAGGTCTTTT 1426
||| ||||||||||| || || |||||||| ||||||||||||||||||||||| || ||
Sbjct 1529 GAAATGGAGCTTTAGTGGAGCTTTTGAGGCGAGGCAGTCACTTATTGTCAGAGGCCTCTT 1588
Query 1427 CCCCATGCTTGCTGACCCTCGTCACCCTGCGGAATCAACAAGTGCAACAAATGAGTCGGT 1486
||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||
Sbjct 1589 CCCTATGCTTGCTGACCCTCGTCACCCTGCGGAATCTACAAGTGCGACAAACGAGTCAGT 1648
Query 1487 TCTGAAAGTGGCTCTAGACCATGGGAAGCAAGCCGGAGTGATCAAGTCACATGACAGAGT 1546
||||| || |||||||||||||||||||| || ||||| |||||||| |||||||||||
Sbjct 1649 CCTGAAGGTTGCTCTAGACCATGGGAAGCATGCTGGAGTAATCAAGTCGCATGACAGAGT 1708
Query 1547 TGTGGTCTGTCAGAAAGTGGGTGATGCGTCCGTGGTCAAAATCATCGAGCTAGAGGATTA 1606
||||| ||||||||||| |||||||| || ||||| || ||||| ||||| ||||||||
Sbjct 1709 AGTGGTGTGTCAGAAAGTTGGTGATGCATCTGTGGTTAAGATCATTGAGCTTGAGGATTA 1768
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80421273090
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5