BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934330
Length=4061
Score E
Sequences producing significant alignments: (Bits) Value
AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ATP binding casset... 6403 0.0
AT1G02530.1 | Symbols: PGP12 | P-glycoprotein 12 | chr1:529795-... 56.5 2e-06
> AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ATP binding cassette
subfamily B1 | chr2:15502014-15507320 FORWARD LENGTH=4279
Length=4279
Score = 6403 bits (3467), Expect = 0.0
Identities = 3873/4072 (95%), Gaps = 15/4072 (0%)
Strand=Plus/Plus
Query 1 TCCGGAGAAACTCACCGGAAATGGATAATGACGGTGGTGCTCCTCCTCCGCCGCCG--AC 58
||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 129 TCCAGAGAAACTCACCGGAAATGGATAATGACGGTGGTGCTCCTCCTCCTCCGCCGACAC 188
Query 59 -AGTAGTGGAGGAGCCTAAGAAAGCAGAGATTCGTGGAGTTGCTTTTAAAGAGCTTTTCA 117
||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 189 TAGTGGTGGAAGAGCCTAAGAAAGCAGAGATTCGTGGAGTTGCTTTTAAAGAGCTATTCA 248
Query 118 GATTCGCCGACGGATTAGATTATGTATTGATGGGAATTGGCTCTGTTGGTGCTTTTGTCC 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 249 GATTCGCCGACGGATTAGATTATGTATTGATGGGAATTGGCTCTGTTGGTGCTTTTGTCC 308
Query 178 ATGGTTGCTCTTTACCTCTGTTTCTTCGATTCTTCGCCGATCTTGTTAATTCCTTTGGTT 237
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 ATGGCTGCTCTTTACCTCTGTTTCTTCGATTCTTCGCCGATCTTGTTAATTCCTTTGGTT 368
Query 238 CTAATGCTAATAACGTTGACAAGATGATGGAAGAAGTTCTAAAGTATGCGCTTTACTTTT 297
||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 369 CTAATTCTAATAACGTTGAAAAGATGATGGAAGAAGTTCTCAAGTATGCGCTTTACTTTT 428
Query 298 TAGTGGTTGGTGCTGCAATCTGGGCTTCTTCTTGGGCAGAGATTTCGTGTTGGATGTGGA 357
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 429 TAGTGGTTGGTGCTGCAATCTGGGCTTCCTCTTGGGCAGAGATTTCGTGTTGGATGTGGA 488
Query 358 GTGGAGAGAGACAAACAACGAAGATGAGGATAAAGTATTTAGAAGCAGCTTTGAATCAAG 417
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 489 GTGGAGAGAGACAAACAACGAAGATGAGGATTAAGTATTTAGAAGCAGCTTTGAATCAAG 548
Query 418 ACATTCAGTTCTTTGATACAGAGGTTCGAACTTCAGATGTTGTCTTCGCCATTAACACCG 477
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 549 ACATTCAGTTCTTTGATACAGAAGTTCGAACTTCAGATGTTGTCTTCGCCATTAACACCG 608
Query 478 ACGCTGTTATGGTTCAAGACGCCATTAGTGAGAAACTTGGTAATTTTATCCATTACATGG 537
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 609 ACGCTGTTATGGTTCAAGACGCCATTAGTGAGAAACTTGGTAATTTCATCCATTACATGG 668
Query 538 CGACTTTTGTGTCTGGATTCATCGTGGGTTTCACGGCGGTGTGGCAACTGGCGTTAGTGA 597
|||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||||
Sbjct 669 CGACTTTTGTTTCTGGATTCATCGTGGGTTTCACTGCGGTGTGGCAACTAGCTTTAGTGA 728
Query 598 CTCTTGCGGTGGTTCCGTTGATAGCTGTGATCGGAGGAATTCACACCACTACTCTCTC-A 656
|||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 729 CTCTCGCGGTGGTTCCGTTGATTGCTGTGATCGGAGGAATTCACACCACTACTCTCTCTA 788
Query 657 AAGCTATCTAATAAGAGTCAAGAGTCTCTTTCACAAGCTGGTAATATCGTCGAACAGACA 716
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 789 AA-CTATCTAATAAGAGTCAAGAGTCTCTTTCACAAGCTGGTAATATCGTCGAACAGACA 847
Query 717 GTGGTGCAAATCAGGGTAGTGATGGCTTTTGTTGGAGAATCAAGAGCTTCACAAGCTTAT 776
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 848 GTGGTACAAATCAGGGTAGTGATGGCTTTCGTTGGAGAATCAAGAGCTTCACAAGCTTAT 907
Query 777 TCCTCAGCTTTAAAGATTGCTCAGAAACTTGGTTACAAGACAGGTTTAGCTAAAGGAATG 836
|| |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 908 TCATCAGCTTTGAAGATTGCTCAGAAGCTTGGTTACAAAACAGGTTTAGCTAAAGGAATG 967
Query 837 GGACTTGGTGCTACTTA-TATCGTTGTCTTCTGTTGCTACGCTCTCTTGCTTTGGTACGG 895
|||||||||||||| || | |||||||||| ||||| |||||||||||||||||||||||
Sbjct 968 GGACTTGGTGCTACATACT-TCGTTGTCTTTTGTTGTTACGCTCTCTTGCTTTGGTACGG 1026
Query 896 AGGCTACCTCGTTCGCCACCATTTGACTAACGGTGGTCTTGCCATTGCCACAATGTTCGC 955
|| || || ||||||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct 1027 TGGTTATCTAGTTCGCCACCATTTGACCAACGGTGGTCTCGCTATTGCCACAATGTTCGC 1086
Query 956 CGTCATGATCGGTGGATTGGCATTGGGACAGTCAGCACCGAGCATGGCTGCATTTGCCAA 1015
||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1087 CGTTATGATTGGTGGATTGGCATTGGGACAATCAGCACCGAGCATGGCTGCATTTGCCAA 1146
Query 1016 AGCAAAGGTTGCTGCTGCAAAGATCTTTAGAATTATTGATCACAAACCTACGATAGAGCG 1075
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1147 AGCAAAGGTTGCTGCTGCAAAGATCTTTAGAATCATTGATCACAAACCAACGATAGAGCG 1206
Query 1076 TAATAGCGAGTCCGGTGTGGAGTTAGACTCGGTCACGGGTCTTGTCGAGCTTAAAAACGT 1135
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1207 TAACAGCGAGTCCGGTGTGGAGTTAGACTCAGTCACGGGTCTTGTCGAGCTTAAAAATGT 1266
Query 1136 GGACTTTTCGTATCCGTCAAGGCCAGATGTTAAGATTCTTAACAACTTCTGCCTCTCTGT 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1267 GGACTTTTCGTATCCGTCAAGGCCAGATGTTAAGATTCTTAACAACTTCTGCCTCTCTGT 1326
Query 1196 TCCCGCTGGGAAGACCATTGCTTTGGTTGGGAGCAGCGGTTCAGGGAAAAGCACAGTCGT 1255
||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1327 TCCTGCTGGGAAGACCATTGCTTTGGTTGGGAGCAGTGGTTCAGGAAAAAGCACAGTCGT 1386
Query 1256 TTCGCTTATAGAGCGGTTTTACGATCCGAACTCAGGACAAGTTTTACTAGATGGGCAGGA 1315
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1387 TTCGCTTATAGAGCGGTTTTACGACCCGAACTCAGGACAAGTTTTACTAGATGGGCAAGA 1446
Query 1316 CCTGAAGACCCTGAAATTGAGATGGTTAAGGCAACAGATAGGGCTAGTGAGTCAAGAACC 1375
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447 CCTGAAGACGCTGAAACTGAGATGGTTAAGGCAACAGATAGGGCTAGTGAGTCAAGAACC 1506
Query 1376 TGCACTATTCGCCACTTCTATTAAAGAGAATATACTCTTAGGCCGTCCCGACGCAGATCA 1435
|||| |||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct 1507 TGCATTATTCGCCACTTCTATCAAGGAGAATATACTCTTAGGCCGTCCTGACGCAGATCA 1566
Query 1436 AGTCGAGATAGAGGAGGCAGCTCGAGTCGCAAATGCTCATTCTTTTATCATCAAACTACC 1495
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1567 AGTCGAGATAGAGGAGGCTGCTCGAGTCGCAAATGCTCATTCCTTTATCATCAAACTACC 1626
Query 1496 TGATGGCTTCGACACACAGGTTGGGGAGAGAGGATTGCAGCTATCAGGTGGGCAGAAGCA 1555
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1627 TGATGGCTTCGACACACAGGTTGGGGAGAGAGGATTGCAGCTGTCTGGTGGGCAGAAGCA 1686
Query 1556 AAGAATTGCGATAGCAAGAGCGATGTTGAAGAACCCGGCAATACTTCTTTTAGATGAGGC 1615
|||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1687 AAGAATAGCGATAGCAAGAGCGATGTTGAAGAACCCGGCGATACTTCTATTAGATGAGGC 1746
Query 1616 GACGAGTGCGTTGGATTCTGAATCAGAGAAGCTTGTACAAGAAGCTTTGGATCGTTTCAT 1675
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1747 GACGAGTGCATTGGATTCTGAATCAGAGAAGCTTGTACAAGAGGCTTTGGATCGTTTCAT 1806
Query 1676 GATTGGAAGGACTACTCTCATCATCGCTCATCGTCTTTCTACCATTCGAAAAGCAGACCT 1735
|||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct 1807 GATTGGAAGGACTACTCTCATCATTGCTCATCGCCTTTCTACCATTCGAAAAGCTGACCT 1866
Query 1736 TGTTGCTGTGCTTCAGCAAGGAAGTGTCTCTGAGATTGGAACGCATGACGAGCTTTTTTC 1795
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1867 TGTTGCTGTGCTACAGCAAGGAAGTGTCTCTGAGATTGGAACGCATGATGAGCTTTTTTC 1926
Query 1796 CAAGGGAGAAAACGGAGTCTATGCTAAGCTAATTAAAATGCAAGAAGCAGCTCACGAAAC 1855
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1927 CAAGGGAGAAAATGGAGTCTATGCTAAGCTAATTAAAATGCAAGAAGCAGCTCACGAAAC 1986
Query 1856 CGCCATGAGCAATGCAAGAAAGAGTAGCGCAAGACCGTCAAGTGCTAGAAACTCGGTTAG 1915
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1987 CGCCATGAGCAATGCAAGAAAGAGTAGCGCAAGACCGTCGAGTGCTAGAAACTCGGTTAG 2046
Query 1916 CTCGCCAATAATGACTCGGAATTCGTCATATGGAAGATCACCTTATTCACGGAGACTCTC 1975
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 2047 CTCGCCAATAATGACTCGGAATTCGTCGTATGGAAGATCACCTTATTCACGGAGACTATC 2106
Query 1976 GGATTTTTCAACTTCTGATTTTAGCCTCTCCATTGACGCTTTTTCCTACCCAAACTATAG 2035
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2107 CGATTTCTCAACTTCTGATTTTAGCCTCTCCATTGACGCTTCGTCCTACCCAAACTATAG 2166
Query 2036 AAACGAGAAGCTGGCCTTCAAGGATCAAGCCAATTCATTCTGGCGACTAGCTAAAATGAA 2095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2167 AAACGAGAAGCTGGCCTTCAAGGATCAAGCCAATTCATTCTGGCGACTAGCTAAAATGAA 2226
Query 2096 CTCTCCAGAGTGGAAATACGCTTTGCTCGGTTCGGTAGGCTCTGTCATTTGTGGCTCCCT 2155
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2227 CTCTCCAGAGTGGAAATACGCTTTGCTCGGTTCAGTAGGCTCTGTCATTTGTGGCTCCCT 2286
Query 2156 CAGCGCGTTCTTTGCGTATGTCCTCAGCGCAGTCTTAAGCATCTACTACAACCCGGACCA 2215
|| || ||||| || ||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 2287 TAGTGCATTCTTCGCATATGTCCTCAGTGCAGTCTTAAGCGTCTACTACAACCCGGACCA 2346
Query 2216 TGAATACATGATCAAACAGATTGATAAGTACTGTTATCTCTTAATCGGTCTCTCTTCCGC 2275
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2347 CGAATACATGATCAAACAGATTGATAAGTACTGTTATCTCTTAATCGGTCTCTCTTCCGC 2406
Query 2276 CGCACTTGTCTTCAACACACTCCAGCATTCTTTTTGGGACATTGTGGGTGAGAATCTAAC 2335
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||
Sbjct 2407 AGCACTTGTCTTCAACACGCTCCAGCATTCTTTCTGGGACATTGTGGGTGAGAATCTGAC 2466
Query 2336 CAAGAGAGTCCGTGAAAAGATGCTCAGCGCCGTACTCAAGAATGAGATGGCTTGGTTTGA 2395
||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 2467 CAAGAGAGTCCGTGAGAAGATGCTGAGCGCTGTACTCAAGAATGAGATGGCTTGGTTTGA 2526
Query 2396 TCAAGAGGAGAATGAAAGTGCAAGAATTGCAGCACGATTAGCCCTTGATGCCAATAATGT 2455
|||||||||||| |||||||||||||| |||||| ||||||| |||||||| ||||||||
Sbjct 2527 TCAAGAGGAGAACGAAAGTGCAAGAATCGCAGCAAGATTAGCTCTTGATGCTAATAATGT 2586
Query 2456 GAGATCAGCCATAGGAGATAGAATCTCCGTTATTGTGCAGAACACAGCACTGATGCTAGT 2515
|||||| || |||||||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct 2587 GAGATCTGCGATAGGAGATAGAATATCGGTTATTGTGCAGAACACAGCACTGATGCTTGT 2646
Query 2516 AGCTTGCACTGCTGGGTTTGTTCTACAGTGGAGGCTTGCACTTGTCCTTGTCGCAGTCTT 2575
||||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct 2647 TGCTTGCACTGCCGGGTTTGTTCTACAATGGAGACTCGCACTTGTCCTTGTCGCAGTCTT 2706
Query 2576 CCCCGTAGTTGTTGCTGCAACTGTCTTACAGAAAATGTTTATGACTGGATTCTCGGGAGA 2635
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 2707 CCCCGTAGTTGTTGCTGCAACTGTCTTACAGAAAATGTTCATGACTGGTTTCTCGGGAGA 2766
Query 2636 CCTGGAAGCGGCGCACGCCAAGGGAACGCAGCTTGCTGGTGAAGCCATAGCTAATGTCAG 2695
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2767 CCTGGAAGCGGCACATGCCAAGGGAACGCAGCTTGCTGGTGAAGCCATAGCTAATGTCAG 2826
Query 2696 GACAGTTGCAGCCTTCAATTCGGAGGCAAAGATTGTTCGTCTCTACACTGCAAACCTAGA 2755
||||||||| || || || ||||||||||||||||| |||||||||||||||||||| ||
Sbjct 2827 GACAGTTGCTGCATTTAACTCGGAGGCAAAGATTGTCCGTCTCTACACTGCAAACCTCGA 2886
Query 2756 ACCACCATTGAAACGATGCTTCTGGAAAGGACAAATCGCTGGAAGTGGCTATGGTGTAGC 2815
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 2887 ACCACCATTGAAACGATGCTTCTGGAAAGGACAGATCGCTGGAAGTGGTTATGGTGTAGC 2946
Query 2816 TCAGTTCTGTCTTTACGCATCTTACGCTCTCGGGCTATGGTACGCATCATGGCTTGTGAA 2875
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2947 TCAGTTCTGTCTTTATGCATCTTATGCTCTCGGGCTATGGTACGCATCATGGCTTGTGAA 3006
Query 2876 ACATGGCATCTCTGACTTCTCCAAAACAATAAGAGTCTTCATGGTTCTGATGGTCTCAGC 2935
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3007 ACACGGCATCTCTGACTTCTCCAAAACCATAAGAGTCTTCATGGTTCTGATGGTCTCAGC 3066
Query 2936 CAATGGTGCTGCAGAGACGCTCACACTGGCTCCTGATTTCATTAAAGGTGGTCAAGCAAT 2995
||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| ||
Sbjct 3067 CAATGGTGCAGCAGAGACACTCACACTGGCTCCTGATTTCATCAAAGGTGGTCAAGCTAT 3126
Query 2996 GCGCTCGGTTTTCGAACTTCTTGACCGGAAAACTGAGATTGAACCCGATGATCCTGATAC 3055
||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 3127 GCGGTCTGTTTTCGAACTTCTTGACCGGAAAACCGAGATTGAACCTGATGATCCTGATAC 3186
Query 3056 CACCCCAGTCCCAGACCGGTTACGCGGCGAAGTTGAACTCAAACACATTGATTTCTCTTA 3115
|||||| ||||||||||||||||| || ||||| || |||||||| || |||||||||||
Sbjct 3187 CACCCCGGTCCCAGACCGGTTACGTGGTGAAGTCGAGCTCAAACATATCGATTTCTCTTA 3246
Query 3116 CCCTTCAAGACCAGACATCCAGATTTTCCGTGACCTTAGCCTTCGTGCTAGAGCTGGCAA 3175
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3247 CCCTTCAAGGCCAGACATCCAGATTTTCCGTGACCTTAGCCTTCGTGCTAGAGCTGGCAA 3306
Query 3176 GACTCTAGCTCTTGTGGGTCCAAGCGGGTGTGGAAAAAGCTCGGTTATCTCCCTCATCCA 3235
|| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 3307 AACCCTAGCTCTTGTGGGTCCAAGCGGGTGCGGAAAAAGCTCAGTTATCTCCCTCATCCA 3366
Query 3236 GAGGTTCTACGAACCGTCCTCAGGTCGAGTCATGATCGATGGGAAAGACATAAGGAAATA 3295
||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 3367 GAGATTCTACGAACCTTCCTCAGGCCGAGTCATGATCGACGGGAAAGACATAAGGAAATA 3426
Query 3296 CAACCTGAAAGCCATAAGGAAACACATAGCCATAGTCCCTCAAGAGCCGTGCTTGTTCGG 3355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3427 CAACCTGAAAGCCATAAGGAAACACATAGCCATAGTCCCTCAAGAGCCGTGCTTGTTCGG 3486
Query 3356 AACCACCATTTACGAAAACATTGCATACGGACACGAGTGTGCGACCGAAGCAGAGATCAT 3415
||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct 3487 AACTACCATTTACGAAAACATTGCATATGGACATGAATGTGCGACCGAAGCAGAGATCAT 3546
Query 3416 TCAAGCAGCGACTCTAGCCAGCGCCCACAAGTTCATATCCGCACTACCCGAAGGTTACAA 3475
||||| |||||||||||||| || ||||| ||||||||||| ||||| |||||||||||
Sbjct 3547 ACAAGCCGCGACTCTAGCCAGTGCGCACAAATTCATATCCGCGCTACCAGAAGGTTACAA 3606
Query 3476 GACGTATGTCGGAGAGAGAGGCGTTCAGCTCTCGGGAGGACAGAAACAGAGGATCGCAAT 3535
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3607 AACGTATGTTGGCGAGAGAGGCGTTCAGCTCTCGGGAGGACAGAAACAGAGGATCGCGAT 3666
Query 3536 CGCACGTGCCCTCGTGAGAAAAGCAGAGATCATGCTGCTCGACGAGGCTACAAGCGCTCT 3595
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 3667 CGCACGTGCCCTCGTGAGGAAAGCAGAGATCATGCTGCTTGACGAGGCTACAAGCGCTCT 3726
Query 3596 TGATGCAGAGTCCGAGAGATCAGTCCAAGAAGCATTGGACCAGGCTTGCTCTGGTAGAAC 3655
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3727 TGATGCAGAGTCCGAGAGATCAGTCCAAGAAGCATTAGACCAGGCTTGCTCTGGTAGAAC 3786
Query 3656 ATCGATTGTCGTGGCTCATAGGCTATCTACAATCAGGAACGCACATGTGATCGCGGTGAT 3715
||| || |||||||||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 3787 ATCAATAGTCGTGGCTCATAGGCTATCTACAATCAGGAACGCACACGTGATCGCTGTCAT 3846
Query 3716 CGATGATGGAAAAGTCGCAGAACAAGGATCGCATTCGCATCTTCTCAAGAACCATCCTGA 3775
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 3847 CGATGATGGAAAAGTGGCTGAACAAGGATCGCATTCGCATCTTCTCAAGAACCATCCTGA 3906
Query 3776 TGGAATCTACGCGCGGATGATACAGTTGCAGAGATTTACGCATACTCAGGTGATTGGTAT 3835
||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||
Sbjct 3907 TGGAATCTACGCGCGAATGATACAGTTGCAAAGATTTACGCATACACAAGTGATTGGTAT 3966
Query 3836 GACATCAGGTTCAAGTTCTAGGGTTAAAGAAGATGATGCTTAGTACTTACTACTTTGGTC 3895
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3967 GACGTCAGGTTCAAGTTCTAGGGTTAAGGAAGATGATGCTTAGTACTTACTACTTTGGTC 4026
Query 3896 ATTATAGAAGAAGAAAGAAG-AGTaaaaaaaaaaaaCAAACATCAGAAGATGTCTCTGAT 3954
|| ||||||||| ||||||| || | |||||| |||||||| |||||||||| ||||||
Sbjct 4027 AT-ATAGAAGAAAAAAGAAGGAG-AGTAAAAAACAACAAACACCAGAAGATGTTTCTGAT 4084
Query 3955 AAAAA-CTCTACGAACTCAT--TTT-CTCttttttt-tttCTGTTTTGATTTTGGGGTTA 4009
||||| |||||||||||||| ||| |||||||||| |||||||||||||||||||||||
Sbjct 4085 AAAAAACTCTACGAACTCATCATTTTCTCTTTTTTTCTTTCTGTTTTGATTTTGGGGTTA 4144
Query 4010 CTTATTTTTGGAACTACGTTTCAGATTTGATGGTATAGTATTATTATTGTGT 4061
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145 CTTATTTTTGGAACTACGTTTCAGATTTGATGGTATAGTATTATTATTGTGT 4196
> AT1G02530.1 | Symbols: PGP12 | P-glycoprotein 12 | chr1:529795-534677
FORWARD LENGTH=3998
Length=3998
Score = 56.5 bits (30), Expect = 2e-06
Identities = 36/39 (92%), Gaps = 0/39 (0%)
Strand=Plus/Plus
Query 3501 CAGCTCTCGGGAGGACAGAAACAGAGGATCGCAATCGCA 3539
||||||||||||||||||||||||||||| || || |||
Sbjct 1557 CAGCTCTCGGGAGGACAGAAACAGAGGATAGCTATTGCA 1595
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 202373448062
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5