BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934360 Length=277 Score E Sequences producing significant alignments: (Bits) Value AT2G37120.1 | Symbols: | S1FA-like DNA-binding protein | chr2:... 394 2e-109 > AT2G37120.1 | Symbols: | S1FA-like DNA-binding protein | chr2:15594030-15594961 REVERSE LENGTH=597 Length=597 Score = 394 bits (213), Expect = 2e-109 Identities = 251/269 (93%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 1 TCTCAGATTTCCGGAT-CGTAGCCATGAGCAGTGAAGGTTCCGCCGGAAAGGCGGCTGTT 59 |||||||||||||||| | |||||||||||||||| ||||||||||||||||||| |||| Sbjct 124 TCTCAGATTTCCGGATAC-TAGCCATGAGCAGTGATGGTTCCGCCGGAAAGGCGGTTGTT 182 Query 60 GAAGCTAAAGGATTGAACCCGGGGTTGATAGTGTTGCTTGTTGTTGGAGGCCTGCTTGTG 119 ||||| |||||||||||||| || ||||||||| |||||||| ||||||| ||||||||| Sbjct 183 GAAGCCAAAGGATTGAACCCTGGATTGATAGTGCTGCTTGTTATTGGAGGTCTGCTTGTG 242 Query 120 ACA-TTCTTGATAGCCAATTACGTGATGTACATGTATGCTCAGAAGAATCTACCCCCAAA 178 ||| ||| | |||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 243 ACATTTC-TCATAGCCAATTACGTTATGTACATGTATGCTCAGAAGAATCTACCTCCAAG 301 Query 179 GAAGAAGAAGCCTCTTTCCAAAAAGAAGCTCAAGCGTGAGAAGCTGAAGCAGGGAGTCCC 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 302 GAAGAAGAAGCCTCTTTCCAAAAAGAAGCTCAAGCGTGAGAAGCTGAAGCAGGGAGTCCC 361 Query 239 CGTGCCCGGCGAATAGATTTCAGCTTCTT 267 |||||||||||||||||| ||||||||| Sbjct 362 TGTGCCCGGCGAATAGATTCCAGCTTCTT 390 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 12717740497 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5