BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934372 Length=2315 Score E Sequences producing significant alignments: (Bits) Value AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 3607 0.0 > AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:15637046-15639522 REVERSE LENGTH=2477 Length=2477 Score = 3607 bits (1953), Expect = 0.0 Identities = 2200/2320 (95%), Gaps = 13/2320 (1%) Strand=Plus/Plus Query 3 AAGATTCCATTTCCTGTAATGGCTTTCATTTCCAGATCTAAACCCTATCAATCGAGAGCT 62 ||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| | |||| Sbjct 55 AAGGTTCCATTTCCTGTAATGGCTTTCATTTCCAGATCTAAACGCTACCAATCAAAAGCT 114 Query 63 AGGGTTTATCTCTCGCTTCCCAGATCCTCAGACTCGTCTTTCTTCTCATTCCCTCGTTTA 122 |||||||||||||||||||||||||| ||| |||| ||| |||||||| |||||||| || Sbjct 115 AGGGTTTATCTCTCGCTTCCCAGATCATCAAACTCATCTCTCTTCTCACTCCCTCGTCTA 174 Query 123 TTCAGCTCAATCGAAGAAACCCAAACTTCAGGC-GACGCAAACCCAGAAACCCAATCTCC 181 |||||| | |||||||||||||||||| || || ||||||||||||||||||||||||| Sbjct 175 TTCAGCACCATCGAAGAAACCCAAACTCCA-GCAAACGCAAACCCAGAAACCCAATCTCC 233 Query 182 AGATGCGAAACCCGAGAC---GAAGAATCTGGGTTCTACAGAGACGAGGCCACTCAGAGA 238 |||||| ||| ||||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct 234 AGATGCAAAATCCGAGACGAAGAAGAATCTGACTTCTACAGAGACGAGACCACTCAGAGA 293 Query 239 GCGATTCCAACGAGGTAAGCGTCAAAACCATGAAAAGCTTGAGGATACAATTTGTAGAAT 298 | | ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 294 GAGGTTCCAACGAGGTAAGCGTCAAAACCATGAAAAGCTAGAGGATACAATATGTAGAAT 353 Query 299 GATGGATAATCGTGCTTGGACGACCCGTTTACAGAACTCGATCCGAGATCTTGTACCTGA 358 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 354 GATGGATAATCGTGCTTGGACGACTCGTTTACAGAACTCAATCCGAGATCTTGTACCTGA 413 Query 359 ATGGGATCATTCTTTAGTGTATAATGTGTTGCACGGTGCTAAGAAACTTGAGCACGCTCT 418 |||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| Sbjct 414 ATGGGATCATTCTTTAGTCTATAATGTATTGCACGGTGCTAAGAAACTTGAGCATGCTCT 473 Query 419 TCAGTTTTTCCGGTGGACGGAGAGATCTGGATTGATTCGTCATGATAGAGATACACATAT 478 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 474 TCAATTTTTCCGGTGGACGGAGAGATCTGGATTGATTCGTCATGATAGAGATACACATAT 533 Query 479 GAAGATGATTAAGATGCTTGGAGAGG-TTCAGAAGCTTAATCATGCTCGGTGTATTTTAT 537 ||| |||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| Sbjct 534 GAAAATGATTAAGATGCTTGGAGAGGTTTC-GAAGCTTAATCATGCTAGGTGTATTTTAT 592 Query 538 TGGATATGCCTGAAAAAGGTGTTCCTTGGGATGAAGATATGTTTGTGGTGCTTATTGAGA 597 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 593 TGGATATGCCTGAAAAGGGTGTTCCTTGGGATGAGGATATGTTTGTGGTGCTTATTGAGA 652 Query 598 GTTATGGCAAAGCTGGGATTGTTCAAGAGTCTGTTAAAATCTTTCAGAAGATGAAGGATT 657 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 653 GTTATGGAAAAGCTGGGATTGTTCAAGAGTCTGTTAAAATCTTTCAGAAGATGAAGGATT 712 Query 658 TGGGTGTGGAGAGGACGATTAAGTCGTATAATACTTTGTTTAAGGTGATTTTGAGGCGTG 717 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 713 TGGGTGTGGAGAGGACGATTAAGTCGTATAATAGTTTGTTTAAGGTGATTTTGAGGCGTG 772 Query 718 GTCGGTATATGATGGCGAAACGGTATTTCAATAAGATGGTTAGTGAGGGTATAGAGCCTA 777 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| | Sbjct 773 GTAGGTATATGATGGCGAAACGGTATTTCAATAAGATGGTTAGTGAGGGTGTTGAGCCAA 832 Query 778 CTCGGCATACTTATAATCTAATGCTTTGGGGGTTCTTTTTGTCTTTGAGGCTT-GAGACT 836 | |||||||||||||||||||||| |||||||||||||||||||||||| || |||||| Sbjct 833 CGAGGCATACTTATAATCTAATGCTGTGGGGGTTCTTTTTGTCTTTGAGG-TTAGAGACT 891 Query 837 GCTTTGAGGTTTTTTGATGATATGAAAACTCGTGGGATCTCGCCGGATGCTGTTAC-TTA 895 ||| ||||||| ||||| |||||||||||| | |||||||||||||||| || ||| || Sbjct 892 GCTCTGAGGTTCTTTGAAGATATGAAAACTAGAGGGATCTCGCCGGATGATGCTACGTT- 950 Query 896 CAATACTATGATCAATGGGTACTGTCGGTTTAAGAAGATGGATGAGGCAGAGAAGTTATT 955 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || Sbjct 951 TAATACTATGATCAATGGGTTCTGCCGGTTTAAGAAGATGGATGAGGCAGAGAAGTTGTT 1010 Query 956 TGTGGAGATGAAAGGGAATAATAGTGAGCCTAGTGTTGTGAGTTACACCACCATGATTAA 1015 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct 1011 TGTGGAGATGAAAGGGAATAAGATTGGGCCTAGTGTTGTGAGTTACACCACGATGATTAA 1070 Query 1016 AGGATATCTTTCAGTTGACCGAGTTGATGATGGGTTGAGAATCTTTGAGGAGATGAGATC 1075 |||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1071 AGGATATCTTGCGGTGGACCGAGTTGATGATGGGTTGAGAATCTTTGAGGAGATGAGATC 1130 Query 1076 TTTTGGTATTGAGCCCAATGCTACGACGTATTCTACATTGTTGCCAGGTCTGTGTGATGC 1135 || |||||||||||| |||||||| |||||||| || |||||||| |||||||||||||| Sbjct 1131 TTCTGGTATTGAGCCTAATGCTACTACGTATTCGACGTTGTTGCCTGGTCTGTGTGATGC 1190 Query 1136 AGGGAAAATGGTGGAGGCTAAGAATATCTTGAAGAATATGATGGCCAAACACATTGCTCC 1195 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1191 AGGGAAAATGGTGGAGGCTAAGAATATCTTGAAGAATATGATGGCGAAACACATTGCTCC 1250 Query 1196 GAAAGATAACTCAATCTTCCTTAAGCTTTTGGTTTCTCAGAGTAAAGCTGGGGATATGGC 1255 ||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||||||||| Sbjct 1251 AAAAGATAACTCGATCTTTCTTAAGCTTTTGGTGTCTCAGAGCAAAGCAGGGGATATGGC 1310 Query 1256 GGCAGCCACTGAGGTGCTCAAAGCCATGGCTACACTGAACGTTCCAGCAGAAGCGGGACA 1315 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 1311 GGCAGCCACTGAGGTGCTCAAAGCCATGGCTACACTGAATGTTCCAGCAGAGGCGGGACA 1370 Query 1316 CTATGGGGTCTTGATTGAGAATCAATGCAAGGCTAGTGCATACAATCGTGCTATCAAGCT 1375 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1371 CTATGGGGTTTTGATTGAGAACCAATGCAAGGCTAGTGCATACAATCGTGCTATCAAGCT 1430 Query 1376 TTTAGATACGCTTATTGAGAAAGAAATCATTTTGAGGCATCAGGATACTCTGGAAATGGA 1435 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1431 TTTAGATACGCTTATTGAGAAAGAAATCATATTGAGGCATCAGGATACTCTGGAAATGGA 1490 Query 1436 GCCCAGCGCATACAACCCGATTATCGAGTATTTGTGCAACAATGGCCAAACGGCGAAAGC 1495 ||||||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct 1491 GCCCAGCGCTTACAACCCAATAATCGAGTATTTGTGCAACAATGGCCAAACGGCAAAAGC 1550 Query 1496 AGAAGTGCTTTTCAGGCAGCTGATGAAAAGAGGTGTCCAAGACCAAGATGCCTTAAACAA 1555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1551 AGAAGTGCTTTTCAGGCAGCTGATGAAAAGAGGTGTCCAAGACCAAGATGCCTTAAACAA 1610 Query 1556 TCTAATCCGTGGTCATGCAAAGGAAGGAAACCCGGATTCTAGTTACGAGATTCTGAAGAT 1615 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1611 TCTAATCCGTGGTCATGCAAAGGAAGGAAACCCAGACTCTAGTTACGAGATTCTGAAGAT 1670 Query 1616 TATGTCGAGGAGAGGTGTCCCTAGAGAAGCAAACGCATATGAACTGCTCATCAAGAGCTA 1675 ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 1671 AATGTCGAGGAGAGGTGTCCCTAGAGAATCAAACGCATATGAGCTGCTCATCAAGAGCTA 1730 Query 1676 CATGAGCAAAGGTGAGCCTGGAGACGCGAAAACCGCACTGGACAGCATGGTCGAAGACGG 1735 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1731 CATGAGCAAAGGTGAGCCTGGAGACGCGAAAACCGCACTGGACAGCATGGTCGAAGACGG 1790 Query 1736 GCATGTCCCAGATTCAGCACTTTTCAGGTCAGTGATTGAGAGTTTGTTTGAGGATGGTAG 1795 |||||||||||| ||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct 1791 GCATGTCCCAGACTCATCGCTTTTCAGGTCAGTGATTGAGAGTTTGTTCGAGGATGGTAG 1850 Query 1796 GGTGCAGACAGCAAGCCGTGTGATGATGATCATGATAGATAAAAACGTTGGTATCGAAGA 1855 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1851 GGTGCAGACAGCAAGCCGTGTGATGATGATCATGATAGATAAAAACGTTGGTATCGAAGA 1910 Query 1856 AAACATGGATTTGATTGCCAAGATCTTGGAAGCTCTCTTAATGAGAGGACACGTAGAAGA 1915 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1911 CAACATGGATTTGATTGCCAAGATCTTGGAAGCCCTCTTAATGAGAGGACACGTAGAAGA 1970 Query 1916 AGCCCTGGGACGTATAGATCTTCTGAACCAAAACGGACACACAGCTGATCTGGACAGCCT 1975 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1971 AGCCCTGGGGCGTATAGATCTTCTGAACCAAAACGGACACACAGCTGATCTGGACAGCCT 2030 Query 1976 CTTATCTGTCTTAAGCGAGAAAGGGAAGACGATTGCAGCATTGAAGCTGTTAGATTTCGG 2035 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2031 CTTATCTGTCTTAAGCGAGAAAGGGAAGACGATTGCAGCATTGAAGCTGTTAGATTTCGG 2090 Query 2036 GTTGGAGAGGGATCTCAGCTTAGATTTTTCGAGCTACGACAAAGTGTTGGATGCGCTTTT 2095 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2091 GTTGGAGAGAGATCTCAGCTTAGAGTTTTCGAGCTACGACAAAGTGTTGGATGCGCTTTT 2150 Query 2096 AGGAGCCGGGAAGACTCTGAATGCGTACTCGGTTCTGTGTAAGATCATGGAGAAAGGAAG 2155 |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 2151 AGGAGCTGGGAAGACTCTGAATGCGTACTCAGTTCTTTGTAAGATCATGGAGAAAGGAAG 2210 Query 2156 TTCAACAGATTGGAAGAGCTCTGATGAACTGATCAAGAGCTTGAACCAAGAAGGAAACAC 2215 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 2211 TTCAACAGATTGGAAGAGCTCTGATGAACTGATCAAAAGCTTGAACCAAGAAGGGAACAC 2270 Query 2216 AAAGCAAGCTGATGTTCTTTCTAGAATGATCAAGAAGGGACAAGGAATCAAGAAACAAAA 2275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2271 AAAGCAAGCTGATGTTCTTTCTAGAATGATCAAGAAGGGACAAGGAATCAAGAAACAAAA 2330 Query 2276 CACTGCTTCTCTATAGAAACTTCTTAACAAGTGATTCTTT 2315 || || |||||||||||||||| || | |||||||||| Sbjct 2331 CAATGTTTCTCTATAGAAACTTGACAA-A-GTGATTCTTT 2368 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 114909047505 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5