BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934410
Length=1011
Score E
Sequences producing significant alignments: (Bits) Value
AT2G37540.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1652 0.0
> AT2G37540.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:15751568-15753967 REVERSE LENGTH=1240
Length=1240
Score = 1652 bits (894), Expect = 0.0
Identities = 969/1006 (96%), Gaps = 1/1006 (0%)
Strand=Plus/Plus
Query 3 agagagagagagatagagagaTCATGGGACTATATGGAGTGATGACAGGGAAAAAAGGAA 62
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 125 AGAGAGAGAGAGAGAGAGAGATCATGGGAATATATGGAGTGATGACAGGGAAAAAAGGAA 184
Query 63 AGAGTGGATTTGGATCTGCTTCTACTGCTGAAGATGTTACTCACTCTATTGATGCCAGTC 122
||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 185 AGAGTGGGTTTGGATCTGCTTCTACTGCTGAAGATGTTACTCAAGCCATTGATGCCAGTC 244
Query 123 ATCTCACTGCCATTATCACAGGTGGAACAGGTGGGATTGGATTGGAGGCAGCAAGAGTGT 182
||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 245 ATCTCACTGCCATCATCACAGGTGGAACAAGTGGGATTGGATTGGAGGCAGCTAGAGTGT 304
Query 183 TAGCAATGAGAGGAGCTCATGTCATCATTGCCGCAAGAAACACAAAAGCTGCTAATGAAT 242
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 305 TAGCAATGAGAGGAGCTCATGTCATCATTGCCGCAAGAAACCCAAAAGCTGCTAATGAGT 364
Query 243 CTAAAGAGATGATTCTTCAGATGAACCCTAATGCTCGCGTAGAGTATATCCAGCTCGATG 302
|||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||
Sbjct 365 CTAAAGAGATGATTCTTCAGATGAACCCTAATGCTCGCGTCGACTATCTCCAGATCGATG 424
Query 303 TCTCTTCCATCAAATCAGTCAGATCCTTCGTCGATCAGTTTCTTGCCCTTAATGTTCCTC 362
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 425 TCTCTTCCATCAAATCAGTCAGATCCTTCGTTGATCAGTTTCTTGCCCTTAATGTTCCTC 484
Query 363 TCAACATACTCATAAACAATGCAGGTGTTATGTTTTGTCCTTTCAAGCTCAGTGAAGATG 422
||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 485 TCAACATTCTCATAAACAATGCAGGTGTTATGTTTTGTCCTTTCAAGCTCACCGAAGATG 544
Query 423 GGATTGAATCACAATTCGCAACAAACCACATTGGTCATTTTCTGTTGACGAATCTGCTTC 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 545 GGATTGAATCACAATTCGCAACAAACCACATTGGTCATTTTCTGTTGACGAATCTGCTTC 604
Query 483 TGGACAAAATGAAGAGTACCGCAAGAGAAAGTGGAGTCCAAGGAAGGATTGTGAATTTGT 542
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 605 TGGACAAAATGAAAAGTACCGCAAGAGAAAGTGGAGTCCAAGGAAGGATTGTGAATCTGT 664
Query 543 CATCTATTGCTCATACTTATACTTACCCTGAAGGTATCAAGTTCCAAGGCATCAATGACC 602
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 665 CATCTATTGCTCATACTTATACTTACTCTGAAGGTATCAAGTTCCAAGGCATCAATGACC 724
Query 603 CTGATGGATATTCGGAGAGAAGGGCTTATGGGCAGTCCAAACTCTCAAACTTGTTGCACT 662
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 725 CTGCTGGATATTCGGAGAGAAGGGCTTATGGACAGTCCAAACTCTCAAACTTGTTGCACT 784
Query 663 CCAATGCACTCTCTCGTAGACTACAGGAAGAAGGTGTGAACATCACTATAAATTCGGTGC 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 785 CCAATGCACTCTCTCGTAGACTACAGGAAGAAGGTGTGAACATCACTATAAATTCGGTGC 844
Query 723 ACCCTGGACTTGTCACCACTAATCTCTTTCGCCACTCCGGTTTTAGCATGAAGGTCTTCA 782
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 845 ACCCTGGTCTTGTCACCACTAATCTCTTTCGCTACTCCGGTTTTAGCATGAAGGTCTTCA 904
Query 783 AGGCTATGACTTTCCTCTTATGGAAAAATATTCCTCAGGGAGCAGCAACAACATGCTACG 842
|||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 905 GGGCTATGACTTTCCTCTTTTGGAAAAATATACCTCAGGGAGCAGCAACAACATGCTACG 964
Query 843 TTGCACTTCATCCTGATCTCGAAGGCGTCACCGGAAAGTATTTCGGCGACTGTAACATCG 902
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 965 TTGCACTTCATCCAGATCTCGAAGGCGTCACCGGAAAGTATTTCGGCGACTGTAACATCG 1024
Query 903 TTACTCCGAGCAAATTTGCTACCAACAATTCTCTCGCCGATAAACTTTGGGATTTCAGTG 962
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1025 TTGCTCCGAGCAAATTTGCTACCAACAATTCTCTCGCCGATAAACTTTGGGATTTCAGTG 1084
Query 963 TCAAACTCATCGATTCTGTCTCTAAATAAATTTATCATCATCAAGA 1008
|| |||||||||||| ||||||||||| | ||||||||||||||
Sbjct 1085 TCTTTCTCATCGATTCTATCTCTAAATAA-TCTATCATCATCAAGA 1129
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49530868942
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5