BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934425
Length=751
Score E
Sequences producing significant alignments: (Bits) Value
AT2G37660.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1142 0.0
> AT2G37660.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:15795213-15797059 REVERSE LENGTH=1328
Length=1328
Score = 1142 bits (618), Expect = 0.0
Identities = 694/731 (95%), Gaps = 3/731 (0%)
Strand=Plus/Plus
Query 1 GAGCTATCAAACTCCAGTCAATGGCGATGAT---GACGACGACGACAACATTCTTCCATC 57
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 63 GAGCTATCAAACTCCAGTCAATGGCGATGATGACGACGACGACGACAACATTCTTCCATC 122
Query 58 CACTACTTCCTGCTAACACGTGCAAATCCGGAGCTGTATCTTCTTCCTTTGTCTCAGTTC 117
||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||
Sbjct 123 CACTACTTCCTGCTAACACTTACAAATCCGGAGCTGTAGCTTCTTCCTTTGTCTCAGTTC 182
Query 118 CTCGTTCTTCGTCTCTTCAATTCCGCTCACTTGTTTCGGATTCTACGTCGATTTGTGGTC 177
||||||| |||||||| ||||| ||||||||||| || ||||||||||||||||||||||
Sbjct 183 CTCGTTCGTCGTCTCTCCAATTTCGCTCACTTGTGTCAGATTCTACGTCGATTTGTGGTC 242
Query 178 GACGTAAGTTCACCGGGAAAAACAGAAGAGTATCGGTTACCGTTTCCGCCGCCGCAACAA 237
| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 CAAGTAAGTTCACCGGAAAAAACAGAAGAGTATCGGTTACCGTTTCCGCCGCCGCAACAA 302
Query 238 ATGAACCTCTCACCGTTCTCGTTACCGGAGCCGGTGGAAGAACAGGACAAATTGTGTATA 297
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 303 CTGAACCTCTCACCGTCCTCGTTACCGGTGCCGGTGGAAGAACAGGACAAATTGTGTATA 362
Query 298 AGAAATTGAAGGAGAGGTCTGATCAGTTTGTTGCGAGAGGTTTAGTGAGGACAAAGGAGA 357
||||||||||||||||||| || ||||| || || || ||||||||||||||||||||||
Sbjct 363 AGAAATTGAAGGAGAGGTCGGAGCAGTTCGTGGCAAGGGGTTTAGTGAGGACAAAGGAGA 422
Query 358 GTAAGGAGAAGATCAATGGAGAAGATGAAGTATTCATTGGAGATATCAGAGATCCTGCAG 417
|||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||
Sbjct 423 GTAAGGAGAAGATCAATGGAGAGGATGAAGTATTCATTGGAGATATTAGAGATACTGCAT 482
Query 418 CCATTGCTCCTGCTGTTGAAGGGATTGATGCTTTGGTCATTCTTACGAGCGCTGTTCCGC 477
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 483 CAATTGCTCCTGCTGTTGAAGGGATTGATGCTTTGGTCATTCTTACTAGCGCTGTTCCGC 542
Query 478 AGATGAAACCCGGTTTTGATCCTAGTAAAGGAGGAAGGCCTGAGTTCTTCTTTGAAGATG 537
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 543 AGATGAAGCCCGGTTTTGATCCTAGTAAAGGAGGAAGACCTGAGTTCTTCTTTGATGATG 602
Query 538 GAGCTTATCCAGAACAGGTTGATTGGATTGGTCAGAAGAATCAGATAGACGCTGCTAAGG 597
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 603 GAGCTTATCCAGAACAGGTTGACTGGATTGGTCAGAAGAATCAGATAGACGCTGCTAAGG 662
Query 598 CAGCAGGAGTTAAGCAGATTGTGTTGGTTGGGTCGATGGGAGGAACAAACATTAATCACC 657
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 663 CTGCAGGAGTTAAGCAGATTGTTTTGGTTGGGTCGATGGGAGGAACAAACATTAATCACC 722
Query 658 CTCTCAATAGTATTGGCAATGCCAACATTCTGGTTTGGAAGAGAAAGGCTGAGCAATACT 717
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 723 CTCTCAATAGTATTGGCAATGCTAACATTCTGGTCTGGAAGAGAAAGGCTGAGCAATACT 782
Query 718 TGGCTGATTCC 728
|||||||||||
Sbjct 783 TGGCTGATTCC 793
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 36469990722
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5