BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg934426

Length=268
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G02700.1 | Symbols: SULTR3;2 | sulfate transporter 3;2 | chr...   243    8e-64


> AT4G02700.1 | Symbols: SULTR3;2 | sulfate transporter 3;2 | chr4:1188983-1193611 
FORWARD LENGTH=2306
Length=2306

 Score =  243 bits (131),  Expect = 8e-64
 Identities = 147/155 (95%), Gaps = 0/155 (0%)
 Strand=Plus/Plus

Query  2    GCCGTTGGTCTACGCGGTAATGGGAAGTTCAAGAGATTTACCGGTGGGAACTGTGGCGGT  61
            ||||||||| |||||| | ||||||||||||||||||||| |||||||||| ||||||||
Sbjct  415  GCCGTTGGTATACGCGATCATGGGAAGTTCAAGAGATTTAGCGGTGGGAACAGTGGCGGT  474

Query  62   GGCCTCGCTGTTGACTGCGGCGATGTTGGGGAAAGAGGTAAACGCAGTGGAGAATCCAAA  121
            ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||
Sbjct  475  GGCCTCGCTGTTGACGGCTGCGATGTTGGGGAAAGAGGTAAACGCAGTGGTGAATCCAAA  534

Query  122  GCTTTACCTTCACTTAGCTTTCACCGCCACTTTCT  156
            |||||||||||||||||||||||||||||||||||
Sbjct  535  GCTTTACCTTCACTTAGCTTTCACCGCCACTTTCT  569



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12265330756


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5