BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934442 Length=727 Score E Sequences producing significant alignments: (Bits) Value AT2G40760.1 | Symbols: | Rhodanese/Cell cycle control phosphat... 859 0.0 > AT2G40760.1 | Symbols: | Rhodanese/Cell cycle control phosphatase superfamily protein | chr2:17010048-17012067 FORWARD LENGTH=1526 Length=1526 Score = 859 bits (465), Expect = 0.0 Identities = 555/595 (93%), Gaps = 20/595 (3%) Strand=Plus/Plus Query 129 CGTGTTTCAGGTGGAATCATTCTTGCACCAGAAGGGATCAATGGAAGTATCTGTGGGATT 188 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 399 CGTGTTTCAGGTGGAATCATTCTTGCACCAGAAGGGATAAATGGAAGTATCTGTGGGATT 458 Query 189 CGTGAATCAGTGGA-GAGAGTGTTGGCATTTATACAGAGTGATATCCGATTGAATGGTTT 247 |||||||||||||| || ||||||||||||||||||||| ||| |||| || |||||||| Sbjct 459 CGTGAATCAGTGGAGGA-AGTGTTGGCATTTATACAGAGAGATGTCCGGTTAAATGGTTT 517 Query 248 GAGGCAAGTGGAGACACCTGTGAGTCCTGAACAAGAAGCAATCCACCATGGACATAGCAG 307 |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || Sbjct 518 GAGGCAAGTGGAGACACCTGTGAGTCCTGAGCAAGAAGCAATTCACCATGGACATAGTAG 577 Query 308 TAGCTCTCCTCTTGCAGCTGGTGAAGATGCTCCCTTTAGATGGGATCACGTTAGGGTCAA 367 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 578 TAGCTCTCCTCTTGCAGCTGGTGAAGATGCTCCATTTAGATGGGATCATGTTAGGGTCAA 637 Query 368 ACTCAAGAAAGAGATTGTTACGCTTGGAATGCCTAGTGTCTCGCCAATTGAAAGAGTTGG 427 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 638 ACTTAAGAAAGAGATTGTTACGCTTGGAATTCCTAGTGTCTCGCCAATTGAAAGAGTTGG 697 Query 428 AACATATGTGAGCCCCGAAGAATGGAACGAACTGATCAGTGATCCAGAAACTGTAGTGAT 487 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 698 AACATATGTGAGTCCCGAAGAATGGAACGAACTGATCAGTGATCCAGAAACTGTAGTGAT 757 Query 488 CGATGTGCGTAATACCTATGAGACTAGAATTGGGAAGTTTAAAGGAGCTGTGGATCCATG 547 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 758 TGATGTGCGTAATACCTATGAGACTAGAATTGGGAAGTTTAAAGGAGCTGTGGATCCATG 817 Query 548 TACCACAGCTTTCAGAAATTTCCCAACTTGGGTGGAGAATCAATTTGCATTGAAGCAAGA 607 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 818 TACCACAGCTTTCAGAAATTTCCCATCTTGGGTGGAGAATCAATTTGCATTGAAGCAAGA 877 Query 608 AGGCAATGAAACGCAAGCAAATGTGGAGCAAGAAGAATGTTCTGAAA-C-C--A------ 657 ||||||||||||||||||||| |||||| |||| || | |||||||| | | | Sbjct 878 AGGCAATGAAACGCAAGCAAAGGTGGAGAAAGAGGATTTTTCTGAAATCACCCATAAAGA 937 Query 658 ---C-----TGAAAAACCGAAGACGCTGCCACGAATTGCTATGTATTGCACTGGa 704 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 938 AGACAAAGCTGAAAAACCGAAGACGCTGCCACGAATTGCTATGTATTGCACTGGA 992 Score = 161 bits (87), Expect = 7e-39 Identities = 113/125 (90%), Gaps = 3/125 (2%) Strand=Plus/Plus Query 17 aaGCATGACTACTGTTTCTCAGTCATTCTCAGATAGAACAGAGTCTAGCGATTCAGATTT 76 ||||||| |||||||||||||| |||||||||| ||||||||||||| ||||| ||||| Sbjct 245 AAGCATGGCTACTGTTTCTCAGGCATTCTCAGAGAGAACAGAGTCTATTGATTCGGATTT 304 Query 77 AGGCTCGCTCGTTGTAGTTTCATTCTACAAATTCACTGACTTTCCTGACCAT-CGTG-TT 134 |||||||||||||||||||||||||||||||||| |||| |||||||| ||| | || || Sbjct 305 AGGCTCGCTCGTTGTAGTTTCATTCTACAAATTCGCTGATTTTCCTGAGCATGC-TGATT 363 Query 135 TCAGG 139 ||||| Sbjct 364 TCAGG 368 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35264371194 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5