BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg934451

Length=202
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G36360.5 | Symbols:  | Galactose oxidase/kelch repeat superf...  99.0    1e-20


> AT2G36360.5 | Symbols:  | Galactose oxidase/kelch repeat superfamily 
protein | chr2:15243413-15247627 REVERSE LENGTH=1691
Length=1691

 Score = 99.0 bits (53),  Expect = 1e-20
 Identities = 72/80 (90%), Gaps = 5/80 (6%)
 Strand=Plus/Plus

Query  3    ATCATCGGCTGAATAAAAATGCATAACTGGGTTCAAGCTTCTTCTTCCGATTTCAGTGGA  62
            ||||||||||   | ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  91   ATCATCGGCT---T-AAAATGCATCACTGGGTTCAAGCTTCTTCTTCCGATTTCAGTGGA  146

Query  63   -CTCCTCCGCAGGCGCGGAG  81
             |||||||||| || |||||
Sbjct  147  ACTCCTCCGCAAGCTCGGAG  166



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 9003941829


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5